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The map label for this gene is hmu [H]

Identifier: 157962425

GI number: 157962425

Start: 3170784

End: 3172745

Strand: Direct

Name: hmu [H]

Synonym: Spea_2604

Alternate gene names: 157962425

Gene position: 3170784-3172745 (Clockwise)

Preceding gene: 157962424

Following gene: 157962426

Centisome position: 61.28

GC content: 46.89

Gene sequence:

>1962_bases
ATGCATTTCCTACGTCCCGAATGGTTTGTAGCCCTTATTCCATTGGCTATATTGCTATTAGTTTTATTTAAGAGCAAAGC
CGCTAGCTCAAGTTGGAACCGCTATATCGCCCCGCACTTAGCTAAGGTGCTTGTTGGCGGCTCGATGAAAAAGAAGCACA
ACAACATTGCTTACCTAGCACTGGCTTGGTTTATTGCCGTATTCGCCCTATCTGGCCCAGCGCTTGAGAAAAGAGCCCTG
CCAGTTTATGAGTCAGCGCAAGGGCGCGTCATCGTCATGGACATGTCTTTGTCTATGTATGCCAATGACTTAGTGCCAAA
CCGTTTAACTCAGGCAAAATTTAGGGCCACAGATCTTATCGATGCTCTATCGGAAGGTGAAACTGGGCTGATAGCCTATG
CGGGTGATGCGTTTACTATTAGCCCACTCACTCGAGATAAAGCGACGCTATTAAACCTGCTGCCAACCCTAACGCCAAGT
ATCATGCCAGTAAGAGGCTCCAACCTTGAGACCGCAATCATTCAGGCAAAGTCGTTACTAAGCCAAGGTGGGCATGTACG
CGGGGACATTATTTTGTTCACCGACGGCGTAAGCTCAACCCAATTTAAGCTTGCTAAATCAGCACTAAGCGGCAGTCAGT
ACCGACTGGCAATTATCGCCTTCGGTAGCCAACAAGGTTCGCCGATTAAGTTACCCGATGGTCAGTTACTACGTGATAAC
TCCAATCAGATTGTCGTCGCAAAAACCGATTACAACTTACTAAAGGAGCTCGCTTCTGAGGCAAATGGTATTCTAGTACT
AAGCCGCGCGGACGGTGGCGATATCACTCAAATTAAGCAGTGGCTAGCCAATACTCAAGATACAAAAGCCAGCGATCTCG
AAGGGGAAACGTGGCAAGATCTAGGCCCCTACTTTGCTCTACTCTTGCTGCTACCGGCACTGTTGAGTTTTAGAAACGGC
ATGATGGCAAGTGTTGCGCTTTTAGTCTTGTTTCAGCCTAGCGGCCAAGTCTACGCCAGCACTTGGGATGATCTTTGGCA
GACCCAAGATCAACAAGCGATGCAGGCTTATCAGGCGCAAGACTATCAAGGCGCTGCAAGTCGATTCGAGAGTCCACAAT
GGCAAGCGAGTGCGCTTTATAAAGCAGGTAATTTTGAAGAGGCCCTCAAGGCTTTTGAGAAAGATGACTCCGCCAACGGC
CTTTATAATCAAGGTAATAGTTTGATGCAATTAGGCAAGTATCCCGAGGCGCAAGAGCGTTATCAATCTGCGCTTGCCAA
GGATCCTCAGCTTGATTCCGCTAAGAGTAACCTTGATCTAGCCAAACAACTACAACAGCAAGATCAGCAGCAACAGAATT
CTGAACAAAGCTCTAATGACAGTTCTGATAACAGTTCTGATAACAGTTCAGAAAAAAATTCTGATAACGGTTCAGATAAC
AGTTCAGAGAATGAGTCGGAACAAAATCAAAGTGGAGAGTCTAAAGGCTCTGACTCACAAGCTAAAAGTAATCAGCAAGA
CGCTCAATCGGAGCAGCAAGACAATGCCAAATCTGATAAGAGCCAATCTCAAGAGCAAGAGGCTAGTGAGCAACAGCAGG
CAAATAATGAAGCTGAAATGCAAGCAAACCCTGATGACGAAAAGGCTGATGAAAACAAGGCTGAACAAAATCAAACTAAT
AGTCAGTCTGCACAACAAGCTCAAAAGCAGGAAGAGCTAGCTAAACAGCAAGCGCAATCTGCAGCAAAGGCTGAGGCCGA
TGAGCCAAATAAAGCAGCCGAGCAAACAGAGCAAGTCGCCGCGAGTGCCATGCCAACAGATGAGCCGCTCCCTCCTGAAA
TGGAGCGAGCACTGCGGGCCGTTGCAGATGATCCACAGGTCTTACTGCGAAATAAAATGCAACTTGAATATCAGAAACGT
CGCCAACAAGGCATCAATTCTAAGGAAAACGAACAGTGGTAA

Upstream 100 bases:

>100_bases
TAGCTTTACTGGCATCAATCATTAATGCTTTAACTAATATTACAGCCTTTAGAGCAAGCTTTAGCGCTAAGTCTCACTTT
GTAAAAGGAGGACGTTAACC

Downstream 100 bases:

>100_bases
TACGGCATATTTTTTTACTCGCGATTATCGCCCTCACAGCCGCCTTTCCAGCTAGCGCGATCACATCGCTTCAGGCCTCT
GTCGACCGTAACCCAGTTAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MHFLRPEWFVALIPLAILLLVLFKSKAASSSWNRYIAPHLAKVLVGGSMKKKHNNIAYLALAWFIAVFALSGPALEKRAL
PVYESAQGRVIVMDMSLSMYANDLVPNRLTQAKFRATDLIDALSEGETGLIAYAGDAFTISPLTRDKATLLNLLPTLTPS
IMPVRGSNLETAIIQAKSLLSQGGHVRGDIILFTDGVSSTQFKLAKSALSGSQYRLAIIAFGSQQGSPIKLPDGQLLRDN
SNQIVVAKTDYNLLKELASEANGILVLSRADGGDITQIKQWLANTQDTKASDLEGETWQDLGPYFALLLLLPALLSFRNG
MMASVALLVLFQPSGQVYASTWDDLWQTQDQQAMQAYQAQDYQGAASRFESPQWQASALYKAGNFEEALKAFEKDDSANG
LYNQGNSLMQLGKYPEAQERYQSALAKDPQLDSAKSNLDLAKQLQQQDQQQQNSEQSSNDSSDNSSDNSSEKNSDNGSDN
SSENESEQNQSGESKGSDSQAKSNQQDAQSEQQDNAKSDKSQSQEQEASEQQQANNEAEMQANPDDEKADENKAEQNQTN
SQSAQQAQKQEELAKQQAQSAAKAEADEPNKAAEQTEQVAASAMPTDEPLPPEMERALRAVADDPQVLLRNKMQLEYQKR
RQQGINSKENEQW

Sequences:

>Translated_653_residues
MHFLRPEWFVALIPLAILLLVLFKSKAASSSWNRYIAPHLAKVLVGGSMKKKHNNIAYLALAWFIAVFALSGPALEKRAL
PVYESAQGRVIVMDMSLSMYANDLVPNRLTQAKFRATDLIDALSEGETGLIAYAGDAFTISPLTRDKATLLNLLPTLTPS
IMPVRGSNLETAIIQAKSLLSQGGHVRGDIILFTDGVSSTQFKLAKSALSGSQYRLAIIAFGSQQGSPIKLPDGQLLRDN
SNQIVVAKTDYNLLKELASEANGILVLSRADGGDITQIKQWLANTQDTKASDLEGETWQDLGPYFALLLLLPALLSFRNG
MMASVALLVLFQPSGQVYASTWDDLWQTQDQQAMQAYQAQDYQGAASRFESPQWQASALYKAGNFEEALKAFEKDDSANG
LYNQGNSLMQLGKYPEAQERYQSALAKDPQLDSAKSNLDLAKQLQQQDQQQQNSEQSSNDSSDNSSDNSSEKNSDNGSDN
SSENESEQNQSGESKGSDSQAKSNQQDAQSEQQDNAKSDKSQSQEQEASEQQQANNEAEMQANPDDEKADENKAEQNQTN
SQSAQQAQKQEELAKQQAQSAAKAEADEPNKAAEQTEQVAASAMPTDEPLPPEMERALRAVADDPQVLLRNKMQLEYQKR
RQQGINSKENEQW
>Mature_653_residues
MHFLRPEWFVALIPLAILLLVLFKSKAASSSWNRYIAPHLAKVLVGGSMKKKHNNIAYLALAWFIAVFALSGPALEKRAL
PVYESAQGRVIVMDMSLSMYANDLVPNRLTQAKFRATDLIDALSEGETGLIAYAGDAFTISPLTRDKATLLNLLPTLTPS
IMPVRGSNLETAIIQAKSLLSQGGHVRGDIILFTDGVSSTQFKLAKSALSGSQYRLAIIAFGSQQGSPIKLPDGQLLRDN
SNQIVVAKTDYNLLKELASEANGILVLSRADGGDITQIKQWLANTQDTKASDLEGETWQDLGPYFALLLLLPALLSFRNG
MMASVALLVLFQPSGQVYASTWDDLWQTQDQQAMQAYQAQDYQGAASRFESPQWQASALYKAGNFEEALKAFEKDDSANG
LYNQGNSLMQLGKYPEAQERYQSALAKDPQLDSAKSNLDLAKQLQQQDQQQQNSEQSSNDSSDNSSDNSSEKNSDNGSDN
SSENESEQNQSGESKGSDSQAKSNQQDAQSEQQDNAKSDKSQSQEQEASEQQQANNEAEMQANPDDEKADENKAEQNQTN
SQSAQQAQKQEELAKQQAQSAAKAEADEPNKAAEQTEQVAASAMPTDEPLPPEMERALRAVADDPQVLLRNKMQLEYQKR
RQQGINSKENEQW

Specific function: May protect the organism from dessication stress. May also contribute to the rigidity and maintenance of the unique square cell morphology of H.walsbyi [H]

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cadherin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001304
- InterPro:   IPR016186
- InterPro:   IPR016187
- InterPro:   IPR002126
- InterPro:   IPR015919
- InterPro:   IPR013784
- InterPro:   IPR014766
- InterPro:   IPR008979
- InterPro:   IPR011493
- InterPro:   IPR006626
- InterPro:   IPR022409 [H]

Pfam domain/function: PF07581 Glug [H]

EC number: NA

Molecular weight: Translated: 71732; Mature: 71732

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLRPEWFVALIPLAILLLVLFKSKAASSSWNRYIAPHLAKVLVGGSMKKKHNNIAYLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHH
LAWFIAVFALSGPALEKRALPVYESAQGRVIVMDMSLSMYANDLVPNRLTQAKFRATDLI
HHHHHHHHHHCCCHHHHCCCCCEECCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHH
DALSEGETGLIAYAGDAFTISPLTRDKATLLNLLPTLTPSIMPVRGSNLETAIIQAKSLL
HHHHCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHH
SQGGHVRGDIILFTDGVSSTQFKLAKSALSGSQYRLAIIAFGSQQGSPIKLPDGQLLRDN
HCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCEEECC
SNQIVVAKTDYNLLKELASEANGILVLSRADGGDITQIKQWLANTQDTKASDLEGETWQD
CCEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHH
LGPYFALLLLLPALLSFRNGMMASVALLVLFQPSGQVYASTWDDLWQTQDQQAMQAYQAQ
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEEECCHHHHHHCCHHHHHHHHHHH
DYQGAASRFESPQWQASALYKAGNFEEALKAFEKDDSANGLYNQGNSLMQLGKYPEAQER
CHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHCCCCCHHHH
YQSALAKDPQLDSAKSNLDLAKQLQQQDQQQQNSEQSSNDSSDNSSDNSSEKNSDNGSDN
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SSENESEQNQSGESKGSDSQAKSNQQDAQSEQQDNAKSDKSQSQEQEASEQQQANNEAEM
CCCCCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QANPDDEKADENKAEQNQTNSQSAQQAQKQEELAKQQAQSAAKAEADEPNKAAEQTEQVA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ASAMPTDEPLPPEMERALRAVADDPQVLLRNKMQLEYQKRRQQGINSKENEQW
HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHFLRPEWFVALIPLAILLLVLFKSKAASSSWNRYIAPHLAKVLVGGSMKKKHNNIAYLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHH
LAWFIAVFALSGPALEKRALPVYESAQGRVIVMDMSLSMYANDLVPNRLTQAKFRATDLI
HHHHHHHHHHCCCHHHHCCCCCEECCCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHH
DALSEGETGLIAYAGDAFTISPLTRDKATLLNLLPTLTPSIMPVRGSNLETAIIQAKSLL
HHHHCCCCEEEEEECCEEEECCCCCHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHH
SQGGHVRGDIILFTDGVSSTQFKLAKSALSGSQYRLAIIAFGSQQGSPIKLPDGQLLRDN
HCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCEEECCCCCEEECC
SNQIVVAKTDYNLLKELASEANGILVLSRADGGDITQIKQWLANTQDTKASDLEGETWQD
CCEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHH
LGPYFALLLLLPALLSFRNGMMASVALLVLFQPSGQVYASTWDDLWQTQDQQAMQAYQAQ
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEEECCHHHHHHCCHHHHHHHHHHH
DYQGAASRFESPQWQASALYKAGNFEEALKAFEKDDSANGLYNQGNSLMQLGKYPEAQER
CHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHCCCCCHHHH
YQSALAKDPQLDSAKSNLDLAKQLQQQDQQQQNSEQSSNDSSDNSSDNSSEKNSDNGSDN
HHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SSENESEQNQSGESKGSDSQAKSNQQDAQSEQQDNAKSDKSQSQEQEASEQQQANNEAEM
CCCCCHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QANPDDEKADENKAEQNQTNSQSAQQAQKQEELAKQQAQSAAKAEADEPNKAAEQTEQVA
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ASAMPTDEPLPPEMERALRAVADDPQVLLRNKMQLEYQKRRQQGINSKENEQW
HHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA