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The map label for this gene is 157962424

Identifier: 157962424

GI number: 157962424

Start: 3169771

End: 3170781

Strand: Direct

Name: 157962424

Synonym: Spea_2603

Alternate gene names: NA

Gene position: 3169771-3170781 (Clockwise)

Preceding gene: 157962423

Following gene: 157962425

Centisome position: 61.26

GC content: 46.98

Gene sequence:

>1011_bases
ATGTTAACCCTCGCCTGGCCATTTTTATTGCTGCTACTGCCTCTACCGCTGATATTTAGAAATAAACAGCAGAAACAACC
TCAGGGCGGCCATCTACTGTTACCCGGAGCCAGCTTACCCGGCCAAGTGGCTATCACCGAAAAAAGCCGACAAACTAGAA
AACGTTACTGGTTAGTATGGTGCTTGCTGGTATTAGCCTGTGCCCGTCCACTTTGGGTTGGAGAGGCTATCGAACTGCCG
AGTAAAGGTCGTGACCTTATGTTATCGGTCGATCTCTCCGGCAGTATGCAAATTGAAGACATGGTGATAGACGGTAAGGT
GGTTGATCGCTTTACTCTGATCCAACATGTCATTAGTGACTTTATTGAACGCAGAAAAGGCGATCGTATCGGTCTTATCC
TTTTTGCCGACCATGCCTATCTGCAGTCACCATTGACCCAAGATAGACGCTCTGTAGCACAATATCTAAAAGAAGCCCAA
ATCGGCCTAGTCGGTAAACAAACTGCCATTGGTGAAGCGATTGCCCTGGGTGTTAAACGTTTCGATAAAGTCGAACAGAG
TAATCGAGTGTTAATTTTACTCACAGATGGTTCTAACAACGCTGGCGCGATAACGCCAGAGCAAGCTAGCCAGATTGCCG
CCCAAAGAGGGATCACCATCTATACCATAGGCGTTGGCGCCGATGTCATGGAACGCAGAACCCTATTTGGCAAAGAAAGG
GTCAACCCATCTATGGATCTAGACGAGTCTCAATTGCAAGAGATTGCCAAAGTCACTGGCGGCCAGTATTTCAGAGCCCG
CAATACCGAGGAGTTAGAGCAGATCTATCAGGTAATCGATACCTTGGAGCCAGTGAGTCGCGATCAACTCAGTTATCGAC
CGCAGTCAGAGCTGTTTTACTGGCCACTGGCCTTAGCTTTACTGGCATCAATCATTAATGCTTTAACTAATATTACAGCC
TTTAGAGCAAGCTTTAGCGCTAAGTCTCACTTTGTAAAAGGAGGACGTTAA

Upstream 100 bases:

>100_bases
AAAAACAAGCTCTAATGCTTCATGCTCAAGGCTGGTTAAAAGCAGCGCTGCCATTAAGAAAAATGTCCTCTATCAGCCCG
AAAAGTAGTGAGGTAAGTCA

Downstream 100 bases:

>100_bases
CCATGCATTTCCTACGTCCCGAATGGTTTGTAGCCCTTATTCCATTGGCTATATTGCTATTAGTTTTATTTAAGAGCAAA
GCCGCTAGCTCAAGTTGGAA

Product: von Willebrand factor type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLTLAWPFLLLLLPLPLIFRNKQQKQPQGGHLLLPGASLPGQVAITEKSRQTRKRYWLVWCLLVLACARPLWVGEAIELP
SKGRDLMLSVDLSGSMQIEDMVIDGKVVDRFTLIQHVISDFIERRKGDRIGLILFADHAYLQSPLTQDRRSVAQYLKEAQ
IGLVGKQTAIGEAIALGVKRFDKVEQSNRVLILLTDGSNNAGAITPEQASQIAAQRGITIYTIGVGADVMERRTLFGKER
VNPSMDLDESQLQEIAKVTGGQYFRARNTEELEQIYQVIDTLEPVSRDQLSYRPQSELFYWPLALALLASIINALTNITA
FRASFSAKSHFVKGGR

Sequences:

>Translated_336_residues
MLTLAWPFLLLLLPLPLIFRNKQQKQPQGGHLLLPGASLPGQVAITEKSRQTRKRYWLVWCLLVLACARPLWVGEAIELP
SKGRDLMLSVDLSGSMQIEDMVIDGKVVDRFTLIQHVISDFIERRKGDRIGLILFADHAYLQSPLTQDRRSVAQYLKEAQ
IGLVGKQTAIGEAIALGVKRFDKVEQSNRVLILLTDGSNNAGAITPEQASQIAAQRGITIYTIGVGADVMERRTLFGKER
VNPSMDLDESQLQEIAKVTGGQYFRARNTEELEQIYQVIDTLEPVSRDQLSYRPQSELFYWPLALALLASIINALTNITA
FRASFSAKSHFVKGGR
>Mature_336_residues
MLTLAWPFLLLLLPLPLIFRNKQQKQPQGGHLLLPGASLPGQVAITEKSRQTRKRYWLVWCLLVLACARPLWVGEAIELP
SKGRDLMLSVDLSGSMQIEDMVIDGKVVDRFTLIQHVISDFIERRKGDRIGLILFADHAYLQSPLTQDRRSVAQYLKEAQ
IGLVGKQTAIGEAIALGVKRFDKVEQSNRVLILLTDGSNNAGAITPEQASQIAAQRGITIYTIGVGADVMERRTLFGKER
VNPSMDLDESQLQEIAKVTGGQYFRARNTEELEQIYQVIDTLEPVSRDQLSYRPQSELFYWPLALALLASIINALTNITA
FRASFSAKSHFVKGGR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 37556; Mature: 37556

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLAWPFLLLLLPLPLIFRNKQQKQPQGGHLLLPGASLPGQVAITEKSRQTRKRYWLVW
CCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHH
CLLVLACARPLWVGEAIELPSKGRDLMLSVDLSGSMQIEDMVIDGKVVDRFTLIQHVISD
HHHHHHHCCCCCCCCHHCCCCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHH
FIERRKGDRIGLILFADHAYLQSPLTQDRRSVAQYLKEAQIGLVGKQTAIGEAIALGVKR
HHHHCCCCEEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDKVEQSNRVLILLTDGSNNAGAITPEQASQIAAQRGITIYTIGVGADVMERRTLFGKER
HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
VNPSMDLDESQLQEIAKVTGGQYFRARNTEELEQIYQVIDTLEPVSRDQLSYRPQSELFY
CCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHH
WPLALALLASIINALTNITAFRASFSAKSHFVKGGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTLAWPFLLLLLPLPLIFRNKQQKQPQGGHLLLPGASLPGQVAITEKSRQTRKRYWLVW
CCCHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHH
CLLVLACARPLWVGEAIELPSKGRDLMLSVDLSGSMQIEDMVIDGKVVDRFTLIQHVISD
HHHHHHHCCCCCCCCHHCCCCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHH
FIERRKGDRIGLILFADHAYLQSPLTQDRRSVAQYLKEAQIGLVGKQTAIGEAIALGVKR
HHHHCCCCEEEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDKVEQSNRVLILLTDGSNNAGAITPEQASQIAAQRGITIYTIGVGADVMERRTLFGKER
HHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
VNPSMDLDESQLQEIAKVTGGQYFRARNTEELEQIYQVIDTLEPVSRDQLSYRPQSELFY
CCCCCCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHH
WPLALALLASIINALTNITAFRASFSAKSHFVKGGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]