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The map label for this gene is ybgC [H]

Identifier: 157962389

GI number: 157962389

Start: 3126733

End: 3127206

Strand: Reverse

Name: ybgC [H]

Synonym: Spea_2568

Alternate gene names: 157962389

Gene position: 3127206-3126733 (Counterclockwise)

Preceding gene: 157962390

Following gene: 157962388

Centisome position: 60.43

GC content: 43.67

Gene sequence:

>474_bases
ATGTCGATTCACAATTGCATACTGGCTAGGTATAGTAGGCCTCTATTTTATCTCATCGATTGGCGATTATCGTTTATGTT
TCGTTGGCCTATTTCGGTTTACTATGAAGATACGGATGCTGGTGGTGTCGTTTACCACTCAAATTACCTTAAGTTTTTTG
AGCGGGCTCGGACCGAGTGGCTTCGCGCTATGCAGGTCAGTCAAACAGCCTTATTAGCAGAGGACACTGCGTTTGTAGTT
AAAAGTGCAGAATTAGATTTTTGTAAGGCTGCACGCTTTGAGCAGAACCTTATTGTAGAAACGAAGGTCATACAACTTAA
GAAAGCATCAATGGTGTTTGAACAACGCCTAATTGACGAGCAAGGTGTGGTGTATTGTGAGGCTAACATTGTTGTTGCCT
GTGTTGCACTGTCACGTATGAGACCCAAAGCCATTCCCCAACATATTGCGCAGGAGTTCAAAGGTGGAAGCTGA

Upstream 100 bases:

>100_bases
TGCTTGCTTTAAGCGCGGCGTACTCATTGCTAGGGCGCCTATGCAACAAGGATTTAGTTGATTAACAAAATTTTATGAAG
AAGCGCATGGCATATCACAT

Downstream 100 bases:

>100_bases
TATTTCTTTTATTGGATTATTTTTACAGGCAAGCCTACTAGTTAAATTAGTCATGCTTACATTGTTAGGCTTGTCGATCG
CCTCTTGGGCGGTGATTATT

Product: Pol-Pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSIHNCILARYSRPLFYLIDWRLSFMFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMQVSQTALLAEDTAFVV
KSAELDFCKAARFEQNLIVETKVIQLKKASMVFEQRLIDEQGVVYCEANIVVACVALSRMRPKAIPQHIAQEFKGGS

Sequences:

>Translated_157_residues
MSIHNCILARYSRPLFYLIDWRLSFMFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMQVSQTALLAEDTAFVV
KSAELDFCKAARFEQNLIVETKVIQLKKASMVFEQRLIDEQGVVYCEANIVVACVALSRMRPKAIPQHIAQEFKGGS
>Mature_156_residues
SIHNCILARYSRPLFYLIDWRLSFMFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEWLRAMQVSQTALLAEDTAFVVK
SAELDFCKAARFEQNLIVETKVIQLKKASMVFEQRLIDEQGVVYCEANIVVACVALSRMRPKAIPQHIAQEFKGGS

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=129, Percent_Identity=46.5116279069767, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18184; Mature: 18053

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHNCILARYSRPLFYLIDWRLSFMFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEW
CCHHHHHHHHHCCCEEEEEEHEEEEEEECCEEEEEECCCCCCEEEEHHHHHHHHHHHHHH
LRAMQVSQTALLAEDTAFVVKSAELDFCKAARFEQNLIVETKVIQLKKASMVFEQRLIDE
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCC
QGVVYCEANIVVACVALSRMRPKAIPQHIAQEFKGGS
CCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SIHNCILARYSRPLFYLIDWRLSFMFRWPISVYYEDTDAGGVVYHSNYLKFFERARTEW
CHHHHHHHHHCCCEEEEEEHEEEEEEECCEEEEEECCCCCCEEEEHHHHHHHHHHHHHH
LRAMQVSQTALLAEDTAFVVKSAELDFCKAARFEQNLIVETKVIQLKKASMVFEQRLIDE
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCC
QGVVYCEANIVVACVALSRMRPKAIPQHIAQEFKGGS
CCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]