Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is tolQ [H]
Identifier: 157962388
GI number: 157962388
Start: 3126054
End: 3126743
Strand: Reverse
Name: tolQ [H]
Synonym: Spea_2567
Alternate gene names: 157962388
Gene position: 3126743-3126054 (Counterclockwise)
Preceding gene: 157962389
Following gene: 157962387
Centisome position: 60.43
GC content: 43.48
Gene sequence:
>690_bases GTGGAAGCTGATATTTCTTTTATTGGATTATTTTTACAGGCAAGCCTACTAGTTAAATTAGTCATGCTTACATTGTTAGG CTTGTCGATCGCCTCTTGGGCGGTGATTATTCAGCGCCGAAGGTTATTAAATGCAGCAAAGAAAGAAGCGCTAAAGTTTG AAGATAAGTTTTGGTCAGGTGTCGACTTGAACAAGCTTTATCAGGAGTTGTCGGCAAGACAAGACAGTAACTCAGGCTTG TCATCTTTATTTGTTACTGGCTTTAAAGAGTATGCTCGTTTAAGTAAGTTAAATGGCCGCGTACCAGAAGCTGTGATGGA TGGCAGTTATCGTGCAATGCGCGTATCGCTATCTCGTGAATTAGAAAAGCTTGAAACTCACCTGCCTTTATTGGCAACTA TTGGTTCTACCAGCCCTTATATTGGTTTGTTTGGTACGGTATGGGGGATCATGAACTCCTTTATCGCACTGGGCGCGGTT GAAAACGCCACACTTGCTATGGTCGCTCCAGGTATTGCTGAAGCCTTGATCGCAACGGCGATGGGCTTATTTGCAGCGAT CCCAGCGGTCATTGCTTATAACCGTTTCTCAACTCAAGTAGAAAAGGTTGAAATGTCTTATGCCAACTTTATGGAAGAGT TCTCTAGCATTTTGCATCGCCAAGCATACAGCGAGAAGGAACAGGCATAA
Upstream 100 bases:
>100_bases GGTGTGGTGTATTGTGAGGCTAACATTGTTGTTGCCTGTGTTGCACTGTCACGTATGAGACCCAAAGCCATTCCCCAACA TATTGCGCAGGAGTTCAAAG
Downstream 100 bases:
>100_bases TGCATCAAGGCTACCAAAGGAAGCGCCGTCGTCCGGTTGCTGAAATAAACGTGGTGCCCTATATCGATGTGATGTTGGTA CTGCTGATTATTTTTATGGT
Product: Tol-Pal system TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MEADISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSGVDLNKLYQELSARQDSNSGL SSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRELEKLETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAV ENATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQAYSEKEQA
Sequences:
>Translated_229_residues MEADISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSGVDLNKLYQELSARQDSNSGL SSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRELEKLETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAV ENATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQAYSEKEQA >Mature_229_residues MEADISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSGVDLNKLYQELSARQDSNSGL SSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRELEKLETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAV ENATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQAYSEKEQA
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=224, Percent_Identity=65.1785714285714, Blast_Score=304, Evalue=3e-84, Organism=Escherichia coli, GI1789381, Length=222, Percent_Identity=37.3873873873874, Blast_Score=124, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25229; Mature: 25229
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEADISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VDLNKLYQELSARQDSNSGLSSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRE CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHH LEKLETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATA HHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHH MGLFAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQAYSEKEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEADISFIGLFLQASLLVKLVMLTLLGLSIASWAVIIQRRRLLNAAKKEALKFEDKFWSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VDLNKLYQELSARQDSNSGLSSLFVTGFKEYARLSKLNGRVPEAVMDGSYRAMRVSLSRE CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHH LEKLETHLPLLATIGSTSPYIGLFGTVWGIMNSFIALGAVENATLAMVAPGIAEALIATA HHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHH MGLFAAIPAVIAYNRFSTQVEKVEMSYANFMEEFSSILHRQAYSEKEQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]