Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962342
Identifier: 157962342
GI number: 157962342
Start: 3072832
End: 3073413
Strand: Direct
Name: 157962342
Synonym: Spea_2521
Alternate gene names: NA
Gene position: 3072832-3073413 (Clockwise)
Preceding gene: 157962341
Following gene: 157962346
Centisome position: 59.38
GC content: 46.91
Gene sequence:
>582_bases ATGTTTTCAATGCAACGCCCCACAGCCTCCAAAGGCTTTACCTTAATCGAACTCGTCATAGTGATCATTGTGCTTGGCAT ACTCGCCGTCATCGCCGCGGCTAAATATGTCGACTTAAAACGTGATGCCGAGATTGCACGAGTTAAAGGAGTTGCGGCGG CATTTGAGCAATCTTTGACATTTTCTCATACCAAATGGCAACTTGTCGCAGGCAGCGGCGCGCTTAACGATCTTCCCGAT TTTGCTGGCGGCAAGCTCGACATGAATAGCCATGGCTACCCCTTAGGCATAGATAAAAACAATCCGATGGGGCAACCTAA GAATATCGGTAAAGGTGAGCAAGGCTGTGTTGATCTTTGGAACACACTGCAACAGGATCCTCCATCGGTATCTTTGTCGA AAGTCAATAACAATAGTGACTTTCAAGCCTACCGCCATCAGGCCGAGGTTAATCCTGATGGCCAGACGCAATGCAGTTAT GTACTGCGTACTCTCGGCGATACTAAAGGCTATCAGCAAGCCGATATTAAAATTGTTTATGACTCAGTTGCAGGCAGTGC TACAGCAGTTATTCGTGAATAA
Upstream 100 bases:
>100_bases CTTCGTTGTCGGCTTGTTTTATTGATGCCGATAAGAATCTTTTATTTCAGCAATTAGTCTATATGCTCTATTATTGAAAC GTCCCTTTATAATCTAGAGA
Downstream 100 bases:
>100_bases CGATTAGCGAAGCAGAAAAACACACAGCAAAAAGGGCGGATATAATCCGCCCTTTGGTTTTTAAACGTGCTGTCCTCCAT TAAAAACTAGAGGTTAGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Prokaryotic N- Methylation Motif Domain Protein
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MFSMQRPTASKGFTLIELVIVIIVLGILAVIAAAKYVDLKRDAEIARVKGVAAAFEQSLTFSHTKWQLVAGSGALNDLPD FAGGKLDMNSHGYPLGIDKNNPMGQPKNIGKGEQGCVDLWNTLQQDPPSVSLSKVNNNSDFQAYRHQAEVNPDGQTQCSY VLRTLGDTKGYQQADIKIVYDSVAGSATAVIRE
Sequences:
>Translated_193_residues MFSMQRPTASKGFTLIELVIVIIVLGILAVIAAAKYVDLKRDAEIARVKGVAAAFEQSLTFSHTKWQLVAGSGALNDLPD FAGGKLDMNSHGYPLGIDKNNPMGQPKNIGKGEQGCVDLWNTLQQDPPSVSLSKVNNNSDFQAYRHQAEVNPDGQTQCSY VLRTLGDTKGYQQADIKIVYDSVAGSATAVIRE >Mature_193_residues MFSMQRPTASKGFTLIELVIVIIVLGILAVIAAAKYVDLKRDAEIARVKGVAAAFEQSLTFSHTKWQLVAGSGALNDLPD FAGGKLDMNSHGYPLGIDKNNPMGQPKNIGKGEQGCVDLWNTLQQDPPSVSLSKVNNNSDFQAYRHQAEVNPDGQTQCSY VLRTLGDTKGYQQADIKIVYDSVAGSATAVIRE
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20842; Mature: 20842
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSMQRPTASKGFTLIELVIVIIVLGILAVIAAAKYVDLKRDAEIARVKGVAAAFEQSLT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC FSHTKWQLVAGSGALNDLPDFAGGKLDMNSHGYPLGIDKNNPMGQPKNIGKGEQGCVDLW CCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHH NTLQQDPPSVSLSKVNNNSDFQAYRHQAEVNPDGQTQCSYVLRTLGDTKGYQQADIKIVY HHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE DSVAGSATAVIRE ECCCCCEEEEECC >Mature Secondary Structure MFSMQRPTASKGFTLIELVIVIIVLGILAVIAAAKYVDLKRDAEIARVKGVAAAFEQSLT CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC FSHTKWQLVAGSGALNDLPDFAGGKLDMNSHGYPLGIDKNNPMGQPKNIGKGEQGCVDLW CCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHH NTLQQDPPSVSLSKVNNNSDFQAYRHQAEVNPDGQTQCSYVLRTLGDTKGYQQADIKIVY HHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEE DSVAGSATAVIRE ECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA