Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962346
Identifier: 157962346
GI number: 157962346
Start: 3076901
End: 3077626
Strand: Direct
Name: 157962346
Synonym: Spea_2525
Alternate gene names: NA
Gene position: 3076901-3077626 (Clockwise)
Preceding gene: 157962342
Following gene: 157962348
Centisome position: 59.46
GC content: 44.35
Gene sequence:
>726_bases ATGTCTCTGCCTACACTCTATTCTTTCAGACGTTGTCCCTATGCCATGCGCGCAAGACTCGGCATTTTATTATCTGGGCA AAGCGTTAACTTAAGAGAGATAGTCCTTAAACATAAGCCAGAGGCCATGCTCACTGCCTCACCAAAAGGCACAGTACCGG TGCTTATTTTACAAGATGGCAGTGTGATTGAAGAGAGCATAGAGATCATGTGTTGGGCGCTGATTAACGATGATCCTCAC AATCTGTTACTTAGTGAAAATCCACGGCAACAAGAAAACGCTCAGGCACTTATTCACGCCAACGATAATCAATTCAAACC TTGGTTAGATAAGTATAAATACGCCGATAGACACCCAGACAATAGTGAGCAGTATTATCGTCAACAAGGAGAGATATTTA TCGGCCAGATTGAGAGCTTATTGGCTAAGCAGACAGTAAAACTATCGCAAGCACAGACACCCGAGCTAATATCGGAACAA GCCTATTCAGCAACATCAAAGTCCCCACAACTGCTTGGCTTTGAGCCAAGTATTGCCGACTACGCCATCTATCCGTTTAT TCGGCAATTTGCCTCTGTAGATAGAGCTTGGTTTGATAATAGTGGCTACACGAATGTGCAGCGCTGGCTAAAGGCTCATA TCGAAAGTCATGAATTCGCCTCGATAATGAAAAAGTACCCAACGTGGCTTGAGAGCGGTGAAAGTTTTCAGCTTGGGCTG GATTAG
Upstream 100 bases:
>100_bases AAAAAACGCAAACCGCCCTCAAATAATTAACATCAGCGATTGTTATTTAACGGTTAAACATTGAAAATAGCGACATAATA CAGCGAGAAAAGATCACAAC
Downstream 100 bases:
>100_bases CTAAATTAAAAAGTCATACTAGATTCGAAACAGCTGCAATTAAATGTTTGGACGCTTTAGTGAATTATCATTGGAATGGT GACTAACAATAGACCGCCCA
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase N Terminus; Glutathione S-Transferase N-Terminal Domain; Glutaredoxin; Glutathione-S-Transferase Domain-Containing Protein; Rhodanese Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase C-Terminal-Like Domain; Glutathione S-Transferase Domain; Glutathione-S-Transferase Domain Protein; Glutathione S-Transferase Omega Class; Rhodanese Domain-Containing Protein; Glutathione S-Transferase N-Terminal Domain Protein; Stringent Starvation Protein A; Glutathione S-Transferase N Terminal Domain Protein; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSLPTLYSFRRCPYAMRARLGILLSGQSVNLREIVLKHKPEAMLTASPKGTVPVLILQDGSVIEESIEIMCWALINDDPH NLLLSENPRQQENAQALIHANDNQFKPWLDKYKYADRHPDNSEQYYRQQGEIFIGQIESLLAKQTVKLSQAQTPELISEQ AYSATSKSPQLLGFEPSIADYAIYPFIRQFASVDRAWFDNSGYTNVQRWLKAHIESHEFASIMKKYPTWLESGESFQLGL D
Sequences:
>Translated_241_residues MSLPTLYSFRRCPYAMRARLGILLSGQSVNLREIVLKHKPEAMLTASPKGTVPVLILQDGSVIEESIEIMCWALINDDPH NLLLSENPRQQENAQALIHANDNQFKPWLDKYKYADRHPDNSEQYYRQQGEIFIGQIESLLAKQTVKLSQAQTPELISEQ AYSATSKSPQLLGFEPSIADYAIYPFIRQFASVDRAWFDNSGYTNVQRWLKAHIESHEFASIMKKYPTWLESGESFQLGL D >Mature_240_residues SLPTLYSFRRCPYAMRARLGILLSGQSVNLREIVLKHKPEAMLTASPKGTVPVLILQDGSVIEESIEIMCWALINDDPHN LLLSENPRQQENAQALIHANDNQFKPWLDKYKYADRHPDNSEQYYRQQGEIFIGQIESLLAKQTVKLSQAQTPELISEQA YSATSKSPQLLGFEPSIADYAIYPFIRQFASVDRAWFDNSGYTNVQRWLKAHIESHEFASIMKKYPTWLESGESFQLGLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27583; Mature: 27451
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPTLYSFRRCPYAMRARLGILLSGQSVNLREIVLKHKPEAMLTASPKGTVPVLILQDG CCCCCHHHHHHCCHHHHHHEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCC SVIEESIEIMCWALINDDPHNLLLSENPRQQENAQALIHANDNQFKPWLDKYKYADRHPD HHHHHHHHEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCC NSEQYYRQQGEIFIGQIESLLAKQTVKLSQAQTPELISEQAYSATSKSPQLLGFEPSIAD CHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCHHH YAIYPFIRQFASVDRAWFDNSGYTNVQRWLKAHIESHEFASIMKKYPTWLESGESFQLGL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCEEECC D C >Mature Secondary Structure SLPTLYSFRRCPYAMRARLGILLSGQSVNLREIVLKHKPEAMLTASPKGTVPVLILQDG CCCCHHHHHHCCHHHHHHEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCC SVIEESIEIMCWALINDDPHNLLLSENPRQQENAQALIHANDNQFKPWLDKYKYADRHPD HHHHHHHHEEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCC NSEQYYRQQGEIFIGQIESLLAKQTVKLSQAQTPELISEQAYSATSKSPQLLGFEPSIAD CHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCHHH YAIYPFIRQFASVDRAWFDNSGYTNVQRWLKAHIESHEFASIMKKYPTWLESGESFQLGL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCEEECC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA