Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is arcB [C]
Identifier: 157962293
GI number: 157962293
Start: 3016457
End: 3019057
Strand: Direct
Name: arcB [C]
Synonym: Spea_2472
Alternate gene names: 157962293
Gene position: 3016457-3019057 (Clockwise)
Preceding gene: 157962292
Following gene: 157962302
Centisome position: 58.29
GC content: 41.14
Gene sequence:
>2601_bases ATGGCTAAACCCAATAGACAATATTCAAAATTAACCGACTGGCGCTCAAATTTACCGATGCAGTTTATGTTGGTTCAACT GCTCGTCGCCGCTGTTATCATCATCACCAGCGTATGGTTTCTCAAAACCATTGAAACAGAACGTTTAATTGATAACCAAG AGTTTTTGAGTATCAATCAGGGCAAAACCATCGTTGCTAAACTGCAGCAAAAAACCAATAAAATTGAAAACCTAGCCGTA TCAATTGGTGCATTGGGCGAACTGTACCAACATAGCCCTCAAGAGTTAAAAACTGCAATACCAGCGCTATTAGATCAGCC TGGGCAACAAGAAGTCATACTCGGCGGTGGAGTATGGCCCGAGCCGTTTTTATTTGCTCCTAACAATCAAAAAGACAGTT TCTTTTGGGCACGAAATTTTGCCGATGAGCTGATTGCAGTCAACGACTATAACGCAGAAGGTATATCGCCCTACTACCAA GAAGATTGGTACGTTCCCGCAAAGTTCTACCCAACGGATACGACCTACTGGTCTAAGTCCTATATTGACCCTTTTACCCA AAAAGCAATGCTGACAGCATCAGTCCCTATGTGGCAGGAACATGAATTTATCGGAGTGTCCACGGTAGATGTCGCACTAT CGAGTCTAGATAACTTTTTTAACACCGCAATATCGAGCCAAGGAGGCTATGTATTCGCGCTTGACCAACAAAACCGATTA TTATCCTATCCAGATCTGGACAATAACGGCACTGTCGATAGGCAGGCGCTGTTTCAACCGTTTGCCACATTTGCCCAAAA GCATCCCTCTTTCAAGCCACTTCAACAAACCATCAAACAGGTTGATACCGATTTTATTCAACGGGCTAATCTCAATAAAG CCTATGAAGAGACACAACTCGCAAATGTTATTGAAAATGTCCCTGAGCATGAACGCGCTAAGCTTGTGGCATTGATAAAT CAAAATGCTAATAACAAACTCCAACAGGTAGAGCTTGTAGCAAGCCTTAAACTTGATAGCGATCCAAGACTTAAGGAGCC CGTGATTGTCACCGTATTCTTAATGCCGGGAACCTACTGGAAGATTGTCTTAGTCACCCCCATCTCGAGTATCGCCTATA ACAGCGAGTCATTAGCAAGCTCTGTTGGCATCTACTTAGTTAGCATACAAATATTTGCGCTTATACTCCTTTTCATCGTG CAAAATAAACTGTTTATCACGCCGATTAGTCGTATGGTTCGTGCTTTAAATGATTCAAACCCAGCCAAAATTGAACTTGA AGCGACAACACGCAATGACGAAATTGGTATGCTCGCCAAGGCCTTTAGTTCTCGGACTCGGCAGTTAGAAATAGCCCTAG CTAGCTTAGACGCCACTAACCTAGCATTAGAGCAACAATTAGATGTTCAACAGCAGTCTAAAACTGAATTAGAAGAGAAA AAAGAGCAGCTGAACTCAGTACTAAACTCAGCGCACAACTTGATATTTATCAAGAATAAAAAAGGCGAATTTACCTTAGT CAACGACCAGTTCTGCAGTGTGCTATCACTTAAGCGAGAGAAGATACTAGGAGCTAAAGACCACCTGATAATGCCTAAAG ATATAGCCAAGGTAAATCAGGAAAAAGATCAGATTGTATTCAATGAAAAGCTTGAATTAAGTTACGAGCAAAGCTTCCCG CTCGATGGTAATCAACATATCTACCTTGTCACTAAGTTTCCTATTTTCAATGAGAAAAAAGAGCTAACCTCTGTTGGTAC AATCGCATTTGATATCAGTGCTAGTAAAGAGGTTGAGCTTAAGAAGCGAGCACAGTTTGAGATCCTTAGGCAGGAAACCT CAGACAATATTCGTGTCATTGAAAAACTAGAGCTGACGAATAAACGACTACAGAGTGAGAGTCAACAAGCCAAGTTTGAG AATAACCGCCAAAACAACTTTGAGAGAGTAAAGCGTGAGAATCAAACACTTTACCCTTCTCTTGTCTCAGCTATTGTAAA ACCCATATTCAGAAAACAAGACGATTTAGCAGCCAGTGCTTACAGGCTTGCAAATGACGAAATCAATGTGACTGACTTTA ACACCAAACTTGCCGATCAAACTGAGCGACTAAGACATCTTGAGTACCTGTTCTCCGCACAGGATTATATAGCCAAACCT ATCGACTTAGTCTCACTGCTTGAACATATTGTCGCGCTGTTACAACCCAAATTAGCCACAAGAAATATTGTTTTAGAAAT AGATAGCGATAACAGGCTGATTGTCGAAGGAGTCCATTGGCATTTTCTACTCATTTTCTATCGAGCTATCAGTAATACCA TTACCGATGCTTTTTATCAGCAAGGCAAGACTCAAAATATGAAGATCGGCTTAAGCAAAGCGAATCAGCAGATAGTGATG ACAATATATGATAATGGAAGAGGCTTCGATGAGACTCAATTAGCAGAGCTTCAAATGACACTTGATAAAGCAGAGGTAAA AGGAACCCTATCGGCACTCTCTGTATGGTTAAAGAGTGAGTTTAACGGGCAACTGAGTATAACGCCCTTACCAGCAAAAT CTGAATTTAATACTTTGGTAAGCTACAACTTATCTACGTAA
Upstream 100 bases:
>100_bases AAACAACAAGACTTATATAATTAGCTCTACAAGCCCCATATCTTATTTAGTACGGATGCCAATGGAGGGGGAAATTGATT ATTTGAGCAGATAACTATAC
Downstream 100 bases:
>100_bases GGAAACGGAAAAGACACCTTAAACATAAAGCTAAGTGTGCGGGTGTCTTTTCTAACAGTGCTATTTATTGACGTAATAAA CGAACCTAAAGCGACACATC
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: PAS/PAC Sensor Protein; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Sensory Box Histidine Kinase; Methyl-Accepting Chemotaxis Sensory Transducer; Multi-Sensor Signal Transduction Histidine Kinase; Methyl-Accepting Chemotaxis Transducer; Methyl-Accepting Chemotaxis Receptor Protein; LuxR Family Transcriptional Regulator; GGDEF Domain-Containing Protein; Histidine Kinase; Fog Ggdef Domain Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Methyl-Accepting Chemotaxis Protein I; Sensory Histidine Kinase; Sensory Box Protein; Chemotaxis Sensory Transducer; Signal Transduction Histidine Kinase Sensor; PAS Domain-Containing Protein; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 866; Mature: 865
Protein sequence:
>866_residues MAKPNRQYSKLTDWRSNLPMQFMLVQLLVAAVIIITSVWFLKTIETERLIDNQEFLSINQGKTIVAKLQQKTNKIENLAV SIGALGELYQHSPQELKTAIPALLDQPGQQEVILGGGVWPEPFLFAPNNQKDSFFWARNFADELIAVNDYNAEGISPYYQ EDWYVPAKFYPTDTTYWSKSYIDPFTQKAMLTASVPMWQEHEFIGVSTVDVALSSLDNFFNTAISSQGGYVFALDQQNRL LSYPDLDNNGTVDRQALFQPFATFAQKHPSFKPLQQTIKQVDTDFIQRANLNKAYEETQLANVIENVPEHERAKLVALIN QNANNKLQQVELVASLKLDSDPRLKEPVIVTVFLMPGTYWKIVLVTPISSIAYNSESLASSVGIYLVSIQIFALILLFIV QNKLFITPISRMVRALNDSNPAKIELEATTRNDEIGMLAKAFSSRTRQLEIALASLDATNLALEQQLDVQQQSKTELEEK KEQLNSVLNSAHNLIFIKNKKGEFTLVNDQFCSVLSLKREKILGAKDHLIMPKDIAKVNQEKDQIVFNEKLELSYEQSFP LDGNQHIYLVTKFPIFNEKKELTSVGTIAFDISASKEVELKKRAQFEILRQETSDNIRVIEKLELTNKRLQSESQQAKFE NNRQNNFERVKRENQTLYPSLVSAIVKPIFRKQDDLAASAYRLANDEINVTDFNTKLADQTERLRHLEYLFSAQDYIAKP IDLVSLLEHIVALLQPKLATRNIVLEIDSDNRLIVEGVHWHFLLIFYRAISNTITDAFYQQGKTQNMKIGLSKANQQIVM TIYDNGRGFDETQLAELQMTLDKAEVKGTLSALSVWLKSEFNGQLSITPLPAKSEFNTLVSYNLST
Sequences:
>Translated_866_residues MAKPNRQYSKLTDWRSNLPMQFMLVQLLVAAVIIITSVWFLKTIETERLIDNQEFLSINQGKTIVAKLQQKTNKIENLAV SIGALGELYQHSPQELKTAIPALLDQPGQQEVILGGGVWPEPFLFAPNNQKDSFFWARNFADELIAVNDYNAEGISPYYQ EDWYVPAKFYPTDTTYWSKSYIDPFTQKAMLTASVPMWQEHEFIGVSTVDVALSSLDNFFNTAISSQGGYVFALDQQNRL LSYPDLDNNGTVDRQALFQPFATFAQKHPSFKPLQQTIKQVDTDFIQRANLNKAYEETQLANVIENVPEHERAKLVALIN QNANNKLQQVELVASLKLDSDPRLKEPVIVTVFLMPGTYWKIVLVTPISSIAYNSESLASSVGIYLVSIQIFALILLFIV QNKLFITPISRMVRALNDSNPAKIELEATTRNDEIGMLAKAFSSRTRQLEIALASLDATNLALEQQLDVQQQSKTELEEK KEQLNSVLNSAHNLIFIKNKKGEFTLVNDQFCSVLSLKREKILGAKDHLIMPKDIAKVNQEKDQIVFNEKLELSYEQSFP LDGNQHIYLVTKFPIFNEKKELTSVGTIAFDISASKEVELKKRAQFEILRQETSDNIRVIEKLELTNKRLQSESQQAKFE NNRQNNFERVKRENQTLYPSLVSAIVKPIFRKQDDLAASAYRLANDEINVTDFNTKLADQTERLRHLEYLFSAQDYIAKP IDLVSLLEHIVALLQPKLATRNIVLEIDSDNRLIVEGVHWHFLLIFYRAISNTITDAFYQQGKTQNMKIGLSKANQQIVM TIYDNGRGFDETQLAELQMTLDKAEVKGTLSALSVWLKSEFNGQLSITPLPAKSEFNTLVSYNLST >Mature_865_residues AKPNRQYSKLTDWRSNLPMQFMLVQLLVAAVIIITSVWFLKTIETERLIDNQEFLSINQGKTIVAKLQQKTNKIENLAVS IGALGELYQHSPQELKTAIPALLDQPGQQEVILGGGVWPEPFLFAPNNQKDSFFWARNFADELIAVNDYNAEGISPYYQE DWYVPAKFYPTDTTYWSKSYIDPFTQKAMLTASVPMWQEHEFIGVSTVDVALSSLDNFFNTAISSQGGYVFALDQQNRLL SYPDLDNNGTVDRQALFQPFATFAQKHPSFKPLQQTIKQVDTDFIQRANLNKAYEETQLANVIENVPEHERAKLVALINQ NANNKLQQVELVASLKLDSDPRLKEPVIVTVFLMPGTYWKIVLVTPISSIAYNSESLASSVGIYLVSIQIFALILLFIVQ NKLFITPISRMVRALNDSNPAKIELEATTRNDEIGMLAKAFSSRTRQLEIALASLDATNLALEQQLDVQQQSKTELEEKK EQLNSVLNSAHNLIFIKNKKGEFTLVNDQFCSVLSLKREKILGAKDHLIMPKDIAKVNQEKDQIVFNEKLELSYEQSFPL DGNQHIYLVTKFPIFNEKKELTSVGTIAFDISASKEVELKKRAQFEILRQETSDNIRVIEKLELTNKRLQSESQQAKFEN NRQNNFERVKRENQTLYPSLVSAIVKPIFRKQDDLAASAYRLANDEINVTDFNTKLADQTERLRHLEYLFSAQDYIAKPI DLVSLLEHIVALLQPKLATRNIVLEIDSDNRLIVEGVHWHFLLIFYRAISNTITDAFYQQGKTQNMKIGLSKANQQIVMT IYDNGRGFDETQLAELQMTLDKAEVKGTLSALSVWLKSEFNGQLSITPLPAKSEFNTLVSYNLST
Specific function: Member Of The Two-Component Regulatory System Arcb/Arca. Sensor-Regulator Protein For Anaerobic Repression Of The Arc Modulon. Activates Arca Via A Four-Step Phosphorelay. Arcb Can Also Dephosphorylate Arca By A Reverse Phosphorelay Involving His- 717 And
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 98526; Mature: 98394
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS50112 PAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPNRQYSKLTDWRSNLPMQFMLVQLLVAAVIIITSVWFLKTIETERLIDNQEFLSINQ CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECC GKTIVAKLQQKTNKIENLAVSIGALGELYQHSPQELKTAIPALLDQPGQQEVILGGGVWP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCC EPFLFAPNNQKDSFFWARNFADELIAVNDYNAEGISPYYQEDWYVPAKFYPTDTTYWSKS CCEEECCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCEECCCCCCCCCHH YIDPFTQKAMLTASVPMWQEHEFIGVSTVDVALSSLDNFFNTAISSQGGYVFALDQQNRL HCCHHHHHHEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCE LSYPDLDNNGTVDRQALFQPFATFAQKHPSFKPLQQTIKQVDTDFIQRANLNKAYEETQL ECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ANVIENVPEHERAKLVALINQNANNKLQQVELVASLKLDSDPRLKEPVIVTVFLMPGTYW HHHHHCCCCHHHHEEEEEECCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCEE KIVLVTPISSIAYNSESLASSVGIYLVSIQIFALILLFIVQNKLFITPISRMVRALNDSN EEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC PAKIELEATTRNDEIGMLAKAFSSRTRQLEIALASLDATNLALEQQLDVQQQSKTELEEK CCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH KEQLNSVLNSAHNLIFIKNKKGEFTLVNDQFCSVLSLKREKILGAKDHLIMPKDIAKVNQ HHHHHHHHHCCCCEEEEECCCCCEEEECHHHHHHHHHHHHHHCCCCCCEECCHHHHHHCC EKDQIVFNEKLELSYEQSFPLDGNQHIYLVTKFPIFNEKKELTSVGTIAFDISASKEVEL CCCCEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHCEEEEEECCCCCHHH KKRAQFEILRQETSDNIRVIEKLELTNKRLQSESQQAKFENNRQNNFERVKRENQTLYPS HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH LVSAIVKPIFRKQDDLAASAYRLANDEINVTDFNTKLADQTERLRHLEYLFSAQDYIAKP HHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCH IDLVSLLEHIVALLQPKLATRNIVLEIDSDNRLIVEGVHWHFLLIFYRAISNTITDAFYQ HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH QGKTQNMKIGLSKANQQIVMTIYDNGRGFDETQLAELQMTLDKAEVKGTLSALSVWLKSE CCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FNGQLSITPLPAKSEFNTLVSYNLST CCCEEEEEECCCCCCCCEEEEEECCC >Mature Secondary Structure AKPNRQYSKLTDWRSNLPMQFMLVQLLVAAVIIITSVWFLKTIETERLIDNQEFLSINQ CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECC GKTIVAKLQQKTNKIENLAVSIGALGELYQHSPQELKTAIPALLDQPGQQEVILGGGVWP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCC EPFLFAPNNQKDSFFWARNFADELIAVNDYNAEGISPYYQEDWYVPAKFYPTDTTYWSKS CCEEECCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCEECCCCCCCCCHH YIDPFTQKAMLTASVPMWQEHEFIGVSTVDVALSSLDNFFNTAISSQGGYVFALDQQNRL HCCHHHHHHEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCE LSYPDLDNNGTVDRQALFQPFATFAQKHPSFKPLQQTIKQVDTDFIQRANLNKAYEETQL ECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ANVIENVPEHERAKLVALINQNANNKLQQVELVASLKLDSDPRLKEPVIVTVFLMPGTYW HHHHHCCCCHHHHEEEEEECCCCCCHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCEE KIVLVTPISSIAYNSESLASSVGIYLVSIQIFALILLFIVQNKLFITPISRMVRALNDSN EEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC PAKIELEATTRNDEIGMLAKAFSSRTRQLEIALASLDATNLALEQQLDVQQQSKTELEEK CCEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH KEQLNSVLNSAHNLIFIKNKKGEFTLVNDQFCSVLSLKREKILGAKDHLIMPKDIAKVNQ HHHHHHHHHCCCCEEEEECCCCCEEEECHHHHHHHHHHHHHHCCCCCCEECCHHHHHHCC EKDQIVFNEKLELSYEQSFPLDGNQHIYLVTKFPIFNEKKELTSVGTIAFDISASKEVEL CCCCEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHCEEEEEECCCCCHHH KKRAQFEILRQETSDNIRVIEKLELTNKRLQSESQQAKFENNRQNNFERVKRENQTLYPS HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH LVSAIVKPIFRKQDDLAASAYRLANDEINVTDFNTKLADQTERLRHLEYLFSAQDYIAKP HHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCH IDLVSLLEHIVALLQPKLATRNIVLEIDSDNRLIVEGVHWHFLLIFYRAISNTITDAFYQ HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH QGKTQNMKIGLSKANQQIVMTIYDNGRGFDETQLAELQMTLDKAEVKGTLSALSVWLKSE CCCCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FNGQLSITPLPAKSEFNTLVSYNLST CCCEEEEEECCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA