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The map label for this gene is dcrA [H]

Identifier: 157962292

GI number: 157962292

Start: 3014768

End: 3016267

Strand: Direct

Name: dcrA [H]

Synonym: Spea_2471

Alternate gene names: 157962292

Gene position: 3014768-3016267 (Clockwise)

Preceding gene: 157962287

Following gene: 157962293

Centisome position: 58.26

GC content: 44.47

Gene sequence:

>1500_bases
ATGATGAAAGAAGTTAAGTTCCGCTGGGTGGATAAATACCTTATCCACATGACACTTAAAACAAAGTTTGCATTATTAGC
TATAATCCCCATCATCACCCTCTTAGGTTTATCAGCGTTGCTAAACAGCGAGTACAGACAAAACCTACTCGATAGCCAAG
TCACTCAAACCCATGAATTCAACCAGACGTTCAATGAAGCACTCAACGTTGCCTATCAATATATTCCCGAAGAAAACAAG
CAGGCATTCTTGGGTGCCATACAAGGCAAACTGTCTATCTATCAACAGCAAAATGCGCCCCATCAATTAACGGCTATCGC
CGCTAAAGGCGGTGAAGCTAATATCACAGGGGATAAGATCGAAAGTGTCAGCTCTAGTGGCTCACAAGGCATCATTACCG
TGTTAAGCACAGAGCAAAATACTAGCAGTCATAATGAATATCTGGCCTATGTTGCAACCAGCCTATTGATCTTGATTATC
CTTATAGTCAGTTACTATATTTCAAGTTTTGTTGGCGGCGCACTTTACACCAATGTCATGGCACTAAAGAGAGCTGCTGA
GGGTGATTTAACCGGTCGGCTTAACTTTTTTGAAGTAAAAGATGAATTCAGTATCCTTGCAATAAGCATAGATACCTTGG
TCGAGCGTCAACATAAACTCGTTAGCGAAGTCACTAACGCCAGCTTACAAATTCGCAATGTAGTTCAAGCCTTTAGAAAT
ACTGCAGAGGAAGGACAATCTTTAGCAATGAATCAGCGCCAGCATATCGACTCATTAGCAACGGCTATGGAACAGATGAC
AGCCGCGGTATCAGAAGTCGCTCGTAATGCTGAGTTGTCTTCCACTGAAACCCAAGAAGCCAATATCCAGGTCGATGCAG
GCTCTCGAGATATCGCCATTACAGTTGAAGCGATTGGTGGATTAGCGATGGAAATTGGCGATGCCTCTGAAGCGGTAAAC
CAGCTCAATGAAAATGCCGCAAAAATTGATGAAGTGGTCTCCACAATTAATGCTATTTCTGAGCAGACTAACTTATTAGC
CTTGAATGCAGCCATTGAGGCGGCGCGAGCGGGTGAACAAGGCCGTGGATTTGCAGTAGTCGCCGATGAGGTTAGAACCC
TTGCAGGTCGAACTCAAGCTGCAACTGTTGAGATAAAAACCATGATTGAAGCACTACAATCCGGGGCCCGTAACCTCAAG
CAAGTCATGCATCGCACCGTAGAAAAAGCCGAAGAAGGTAAGAAGCATGTACTCGATACGGGAAAAGACTTGGAAGGCAT
TGCTCACCATAGCGCCAAAGTCTTCGAAATGAGTGAGTTGATTGCCACATCAGCCGAAGAGCAGTCCTCTGTCGCAAACG
AGATAGCCACCAATCTTATGGGTATTCGCAATCAATCTCACGATGTAGAACAATCTGCAAATCAGTCGGTATCAAGCTGT
AATGAACTGCATGCAACTGCCGAACAGCTGGATAAACTGCTTATTGGCTTAAAGGTCTAG

Upstream 100 bases:

>100_bases
GAAAAGTCAACAAACTGGCCTTTATTGTAAAAAAATAATTAAGGAAACAGCCAAGCATTCCGATAAGTAACTAAGTCGTC
GCGATTATAATAAAGAGAAT

Downstream 100 bases:

>100_bases
TTAATAGCAATATTAAAAGCAGCCACTTGGCTGCTTTTTTGATTCTAAATAAATTTCACGCACTAAAACACCTTGTTTAT
TTTACAAAAAAACAACAAGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MMKEVKFRWVDKYLIHMTLKTKFALLAIIPIITLLGLSALLNSEYRQNLLDSQVTQTHEFNQTFNEALNVAYQYIPEENK
QAFLGAIQGKLSIYQQQNAPHQLTAIAAKGGEANITGDKIESVSSSGSQGIITVLSTEQNTSSHNEYLAYVATSLLILII
LIVSYYISSFVGGALYTNVMALKRAAEGDLTGRLNFFEVKDEFSILAISIDTLVERQHKLVSEVTNASLQIRNVVQAFRN
TAEEGQSLAMNQRQHIDSLATAMEQMTAAVSEVARNAELSSTETQEANIQVDAGSRDIAITVEAIGGLAMEIGDASEAVN
QLNENAAKIDEVVSTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVEIKTMIEALQSGARNLK
QVMHRTVEKAEEGKKHVLDTGKDLEGIAHHSAKVFEMSELIATSAEEQSSVANEIATNLMGIRNQSHDVEQSANQSVSSC
NELHATAEQLDKLLIGLKV

Sequences:

>Translated_499_residues
MMKEVKFRWVDKYLIHMTLKTKFALLAIIPIITLLGLSALLNSEYRQNLLDSQVTQTHEFNQTFNEALNVAYQYIPEENK
QAFLGAIQGKLSIYQQQNAPHQLTAIAAKGGEANITGDKIESVSSSGSQGIITVLSTEQNTSSHNEYLAYVATSLLILII
LIVSYYISSFVGGALYTNVMALKRAAEGDLTGRLNFFEVKDEFSILAISIDTLVERQHKLVSEVTNASLQIRNVVQAFRN
TAEEGQSLAMNQRQHIDSLATAMEQMTAAVSEVARNAELSSTETQEANIQVDAGSRDIAITVEAIGGLAMEIGDASEAVN
QLNENAAKIDEVVSTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVEIKTMIEALQSGARNLK
QVMHRTVEKAEEGKKHVLDTGKDLEGIAHHSAKVFEMSELIATSAEEQSSVANEIATNLMGIRNQSHDVEQSANQSVSSC
NELHATAEQLDKLLIGLKV
>Mature_499_residues
MMKEVKFRWVDKYLIHMTLKTKFALLAIIPIITLLGLSALLNSEYRQNLLDSQVTQTHEFNQTFNEALNVAYQYIPEENK
QAFLGAIQGKLSIYQQQNAPHQLTAIAAKGGEANITGDKIESVSSSGSQGIITVLSTEQNTSSHNEYLAYVATSLLILII
LIVSYYISSFVGGALYTNVMALKRAAEGDLTGRLNFFEVKDEFSILAISIDTLVERQHKLVSEVTNASLQIRNVVQAFRN
TAEEGQSLAMNQRQHIDSLATAMEQMTAAVSEVARNAELSSTETQEANIQVDAGSRDIAITVEAIGGLAMEIGDASEAVN
QLNENAAKIDEVVSTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVEIKTMIEALQSGARNLK
QVMHRTVEKAEEGKKHVLDTGKDLEGIAHHSAKVFEMSELIATSAEEQSSVANEIATNLMGIRNQSHDVEQSANQSVSSC
NELHATAEQLDKLLIGLKV

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=194, Percent_Identity=38.1443298969072, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788195, Length=201, Percent_Identity=36.318407960199, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1788194, Length=304, Percent_Identity=29.2763157894737, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI2367378, Length=323, Percent_Identity=27.2445820433437, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789453, Length=137, Percent_Identity=39.4160583941606, Blast_Score=83, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 54190; Mature: 54190

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKEVKFRWVDKYLIHMTLKTKFALLAIIPIITLLGLSALLNSEYRQNLLDSQVTQTHEF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQTFNEALNVAYQYIPEENKQAFLGAIQGKLSIYQQQNAPHQLTAIAAKGGEANITGDKI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHH
ESVSSSGSQGIITVLSTEQNTSSHNEYLAYVATSLLILIILIVSYYISSFVGGALYTNVM
HHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKRAAEGDLTGRLNFFEVKDEFSILAISIDTLVERQHKLVSEVTNASLQIRNVVQAFRN
HHHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEEGQSLAMNQRQHIDSLATAMEQMTAAVSEVARNAELSSTETQEANIQVDAGSRDIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE
TVEAIGGLAMEIGDASEAVNQLNENAAKIDEVVSTINAISEQTNLLALNAAIEAARAGEQ
EEEHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCC
GRGFAVVADEVRTLAGRTQAATVEIKTMIEALQSGARNLKQVMHRTVEKAEEGKKHVLDT
CCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GKDLEGIAHHSAKVFEMSELIATSAEEQSSVANEIATNLMGIRNQSHDVEQSANQSVSSC
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NELHATAEQLDKLLIGLKV
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKEVKFRWVDKYLIHMTLKTKFALLAIIPIITLLGLSALLNSEYRQNLLDSQVTQTHEF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQTFNEALNVAYQYIPEENKQAFLGAIQGKLSIYQQQNAPHQLTAIAAKGGEANITGDKI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHH
ESVSSSGSQGIITVLSTEQNTSSHNEYLAYVATSLLILIILIVSYYISSFVGGALYTNVM
HHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKRAAEGDLTGRLNFFEVKDEFSILAISIDTLVERQHKLVSEVTNASLQIRNVVQAFRN
HHHHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEEGQSLAMNQRQHIDSLATAMEQMTAAVSEVARNAELSSTETQEANIQVDAGSRDIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE
TVEAIGGLAMEIGDASEAVNQLNENAAKIDEVVSTINAISEQTNLLALNAAIEAARAGEQ
EEEHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCC
GRGFAVVADEVRTLAGRTQAATVEIKTMIEALQSGARNLKQVMHRTVEKAEEGKKHVLDT
CCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
GKDLEGIAHHSAKVFEMSELIATSAEEQSSVANEIATNLMGIRNQSHDVEQSANQSVSSC
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
NELHATAEQLDKLLIGLKV
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]