Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yitL [H]

Identifier: 157962302

GI number: 157962302

Start: 3027546

End: 3028379

Strand: Direct

Name: yitL [H]

Synonym: Spea_2481

Alternate gene names: 157962302

Gene position: 3027546-3028379 (Clockwise)

Preceding gene: 157962293

Following gene: 157962303

Centisome position: 58.51

GC content: 40.53

Gene sequence:

>834_bases
ATGATCCAGATAGGCAAAACCTGTAAGTTAGAAGTCGTCAAACAAGTTGATTTTGGTGTCTATTTAGACGCTAAAGAGAT
GGGCCAGGTACTTCTTCCTCGCAAAGCTGTACCAAAGGATTGCCATGTTGGAGATATGGTCAATGTGTTTCTCTATTTAG
ACTCAGAAGATATGATCATTGCAACGACTAAGCGTCCTTATGCACAAGTCGGTCAATTTGCTTATCTAGAAGCAAAAGAA
AATGGCCCATATGGCGCCTTTTTGGATTGGGGCTTAGAAAAAGACCTGTTATTACCTTTTGGTGAGCAACACAGAGAAAT
CGAGGTGGGTAAGTCCTACTTGGTTTACATCTATACCAGCCATGTCGACGACCGTATCGTTGCATCTGCTAAAGTCGATA
AATTCCTCGACTTATCTGAACCTAAATTCCGCAATGATGAAGAAGTTAATCTAATCATTGGTGGCTCAACCGATCTTGGT
TATAAAGCCATCATAAACAATACCCACTGGGGCGTATTGTACAAAAATGAAGTTTATACGCGTTTAAGTTTTGGCCAAAA
GCTGAAAGGCTTTATTAAGCGTATGAGAAGCGACGGTAAAATCGATCTGATTTTACAAAAAGGCGCGAAAGAGGAGCTTG
ATAAGCACTCTGTCACTATCATGATTAAACTAAATCAAGCTGGCGGTTTCCTACCACTCAATGATAAGACCGATGCTGAT
GTGATCTATTCACAACTGTCTATGAGTAAGAAAGCCTTTAAAAAGAGTATCGGTGGCCTTTATAAGAGTAAGCAGATCAC
TATTTCACCAGATGGGATCCGTCTAGCAGACTAA

Upstream 100 bases:

>100_bases
CTTTAGGGCATTAGTTTCAACAGGCTAAAGCATATTGGAACGTTTTCCACTATAATCCCAGCTGAATTTAATCGTTACTG
TTTTTAAAGTAGAGAACATC

Downstream 100 bases:

>100_bases
TCTATAGGCAGAAGTTGCTTACAAACCCAGCAACTGAAGAGTTTAGATAGTTAAGCGCACTAAACCACCTTTGCATTAAA
GCATGGCTCTGTTATAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMIIATTKRPYAQVGQFAYLEAKE
NGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTSHVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLG
YKAIINNTHWGVLYKNEVYTRLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD
VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD

Sequences:

>Translated_277_residues
MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMIIATTKRPYAQVGQFAYLEAKE
NGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTSHVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLG
YKAIINNTHWGVLYKNEVYTRLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD
VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD
>Mature_277_residues
MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMIIATTKRPYAQVGQFAYLEAKE
NGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTSHVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLG
YKAIINNTHWGVLYKNEVYTRLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD
VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31211; Mature: 31211

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMII
CCCCCCCCEEEEEEECCCEEEECHHHHCHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEE
ATTKRPYAQVGQFAYLEAKENGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTS
EECCCCHHHHCCEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCEEECCCEEEEEEEEC
HVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLGYKAIINNTHWGVLYKNEVYT
CCCCCEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCEEE
RLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD
EHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCEEEEEEEECCCCCEEECCCCCCHH
VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECC
>Mature Secondary Structure
MIQIGKTCKLEVVKQVDFGVYLDAKEMGQVLLPRKAVPKDCHVGDMVNVFLYLDSEDMII
CCCCCCCCEEEEEEECCCEEEECHHHHCHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEE
ATTKRPYAQVGQFAYLEAKENGPYGAFLDWGLEKDLLLPFGEQHREIEVGKSYLVYIYTS
EECCCCHHHHCCEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCEEECCCEEEEEEEEC
HVDDRIVASAKVDKFLDLSEPKFRNDEEVNLIIGGSTDLGYKAIINNTHWGVLYKNEVYT
CCCCCEEEHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEEEEECCCEEE
RLSFGQKLKGFIKRMRSDGKIDLILQKGAKEELDKHSVTIMIKLNQAGGFLPLNDKTDAD
EHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCCEEEEEEEECCCCCEEECCCCCCHH
VIYSQLSMSKKAFKKSIGGLYKSKQITISPDGIRLAD
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]