Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is hisH [H]
Identifier: 157962281
GI number: 157962281
Start: 3003934
End: 3004677
Strand: Direct
Name: hisH [H]
Synonym: Spea_2460
Alternate gene names: 157962281
Gene position: 3003934-3004677 (Clockwise)
Preceding gene: 157962280
Following gene: 157962282
Centisome position: 58.05
GC content: 48.79
Gene sequence:
>744_bases ATGAGCCAACAAGATAAAGCAGGCTTGAGCGATGATCGTTCATTGAACAATAACAAAGCCATAGTCGGCAACACCGTTAT TGTCGACACAGGTTGCGCCAATTTAAGCTCTGTGCGTTACGCCTTCGAACGTCTAATGACGGATATTGAGCGCGAGCGCC TATTTGTCACCGATGATATCGAGATGATAAGAGCTGCCGAGCGGGTGATTTTGCCTGGTGTCGGCACTGCTGCGGCTGCC ATGAGCGCTTTACAAAGCAAAGGCTTAGTACAACTTATCCCTGAGTTGACCCAACCGGTACTCGGTGTGTGTTTAGGCAT GCAGATGCTGACAAGAGTATCTAAAGAACGTGGCAGCCAAAGTGAAGACTGTCCGTGTCTCAATATCATACCGACTGATA TCAATTTACTCGACACCAAAGGACTGCCACTGCCGCATATGGGCTGGAATCAGCTAGTGCCAGGCTCACATCCCATCTTT GACGGGATCACAGCGGGCAGTTATGTGTATTTTGTCCACAGCTACCGAGCACCAATCAGTGATTACACTATCGCTACGGC GCAGCACGGAGAAACATTTAGCGCGGCAATTGCCAAAGATAATTTTATCGGTCTGCAGTTCCACCCTGAAAAAAGCGCGG AAGTCGGTGCAAGAATGCTTAAAAACTTCCTGACTATGGATCAAGCGACGTTCAGTCCAACAAATAACCAACTGGCGTAT GGCCAGCAAGAGGCGCAGTTATGA
Upstream 100 bases:
>100_bases ATCACCACAAGGTTGAGAGCTTATTTAAAGTCCTTGGTCGTACTCTTCGACAAGCAGTAGCGATAGAAGGTGATGCGCTG CCATCAAGTAAAGGTGTGTT
Downstream 100 bases:
>100_bases TTATTCCAGCAATCGATCTTATCGATGGTCAAGTTGTTCGCCTCTATCAAGGGGATTATGCCCAGCAGACCACCTTTAAT TTAAGCCCATTAGATCAGCT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSQQDKAGLSDDRSLNNNKAIVGNTVIVDTGCANLSSVRYAFERLMTDIERERLFVTDDIEMIRAAERVILPGVGTAAAA MSALQSKGLVQLIPELTQPVLGVCLGMQMLTRVSKERGSQSEDCPCLNIIPTDINLLDTKGLPLPHMGWNQLVPGSHPIF DGITAGSYVYFVHSYRAPISDYTIATAQHGETFSAAIAKDNFIGLQFHPEKSAEVGARMLKNFLTMDQATFSPTNNQLAY GQQEAQL
Sequences:
>Translated_247_residues MSQQDKAGLSDDRSLNNNKAIVGNTVIVDTGCANLSSVRYAFERLMTDIERERLFVTDDIEMIRAAERVILPGVGTAAAA MSALQSKGLVQLIPELTQPVLGVCLGMQMLTRVSKERGSQSEDCPCLNIIPTDINLLDTKGLPLPHMGWNQLVPGSHPIF DGITAGSYVYFVHSYRAPISDYTIATAQHGETFSAAIAKDNFIGLQFHPEKSAEVGARMLKNFLTMDQATFSPTNNQLAY GQQEAQL >Mature_246_residues SQQDKAGLSDDRSLNNNKAIVGNTVIVDTGCANLSSVRYAFERLMTDIERERLFVTDDIEMIRAAERVILPGVGTAAAAM SALQSKGLVQLIPELTQPVLGVCLGMQMLTRVSKERGSQSEDCPCLNIIPTDINLLDTKGLPLPHMGWNQLVPGSHPIFD GITAGSYVYFVHSYRAPISDYTIATAQHGETFSAAIAKDNFIGLQFHPEKSAEVGARMLKNFLTMDQATFSPTNNQLAYG QQEAQL
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=204, Percent_Identity=49.0196078431373, Blast_Score=196, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6319725, Length=212, Percent_Identity=32.5471698113208, Blast_Score=105, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 26921; Mature: 26790
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQDKAGLSDDRSLNNNKAIVGNTVIVDTGCANLSSVRYAFERLMTDIERERLFVTDDI CCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEECCH EMIRAAERVILPGVGTAAAAMSALQSKGLVQLIPELTQPVLGVCLGMQMLTRVSKERGSQ HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SEDCPCLNIIPTDINLLDTKGLPLPHMGWNQLVPGSHPIFDGITAGSYVYFVHSYRAPIS CCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC DYTIATAQHGETFSAAIAKDNFIGLQFHPEKSAEVGARMLKNFLTMDQATFSPTNNQLAY CCEEEECCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEC GQQEAQL CHHHCCC >Mature Secondary Structure SQQDKAGLSDDRSLNNNKAIVGNTVIVDTGCANLSSVRYAFERLMTDIERERLFVTDDI CCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEEECCH EMIRAAERVILPGVGTAAAAMSALQSKGLVQLIPELTQPVLGVCLGMQMLTRVSKERGSQ HHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SEDCPCLNIIPTDINLLDTKGLPLPHMGWNQLVPGSHPIFDGITAGSYVYFVHSYRAPIS CCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC DYTIATAQHGETFSAAIAKDNFIGLQFHPEKSAEVGARMLKNFLTMDQATFSPTNNQLAY CCEEEECCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEC GQQEAQL CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA