Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
---|---|
Accession | NC_009901 |
Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is hisB [H]
Identifier: 157962280
GI number: 157962280
Start: 3002843
End: 3003937
Strand: Direct
Name: hisB [H]
Synonym: Spea_2459
Alternate gene names: 157962280
Gene position: 3002843-3003937 (Clockwise)
Preceding gene: 157962279
Following gene: 157962281
Centisome position: 58.03
GC content: 46.76
Gene sequence:
>1095_bases ATGAAGCAGAAAATTTTATTTATCGACCGTGATGGCACCCTAATCGAAGAGCCAGTTACAGATAAACAAGTCGATAGTCT AGCTAAACTCGTGTTTGAGCCAAATGTGATCCCTGCGCTATTAAAGCTGCAGAATGCAGGTTACAGACTGGTCATGATCA GTAATCAGGATGGTCTTGGTACGCCTTCTTTCCCAAAAGATGATTTTGACGCGCCGCAAGATATGATGATGCAGATCTTA AATAGCCAAGGTGTGTTATTTGATGACGTGCTTATCTGCCCACACTTTGATGATGAAAACTGTAGCTGCCGTAAACCTAA GCTTGGCCTAGTTAAAGGTTACCTGACTTCTGGCAAGATAGACTTTACCCAGTCAGCCGTGATTGGCGATCGTGAAACTG ACCTTGGCCTTGCAGATTCAATGGGCATATTAGGGCTGCAATACCACCCTGAGACGCTTAATTGGAACGCTATTGCCGCT AAGTTGCTGAACAAGAACCGCTGCGCAACTGTCACTCGCACCACTAAAGAAACCGATATCCGCGTCACTGTTGATTTAGA CGCCGCAGATAAAGGTGCGATCAACACAGGCATAGGTTTCTTTGACCATATGCTGGAACAGATCTCGACACACGGTAATT TCAAGCTAGATGTTCAGGTCGATGGCGACTTAGAGATTGACGATCACCACAGTGTTGAAGATACGGCGCTCGCTATCGGT GATGCATTGCGACAAGCCCTTGGTGATAAACGCGGCATTGCACGCTTTGGTAACTCACTACCTAATGATGTATTCCAGCA GGCAATTCCTATGGATGAAGCCAGTGCTAGCTGTCTATTAGACTTATCTGGCCGTCCTTTTATCAAGTTTGACGGCGAGT TTGACCGTGAGCTTGTGGGGCAGCTGTCTACTGAAATGGTGCCGCACTTCTTCCGCTCATTCGCCGATGGCCTACGCTGC ACCCTACACATCAGCACTCAAGGTGATAATGATCACCACAAGGTTGAGAGCTTATTTAAAGTCCTTGGTCGTACTCTTCG ACAAGCAGTAGCGATAGAAGGTGATGCGCTGCCATCAAGTAAAGGTGTGTTATGA
Upstream 100 bases:
>100_bases TCAACAAAAATAAAATAGCTAGAAAGCTAATAATTAAAAAATAACGATAGCTTGACTGGTATTGATTTAGTTAAGCGCAA ATTTGAAAGGTATACCCGCT
Downstream 100 bases:
>100_bases GCCAACAAGATAAAGCAGGCTTGAGCGATGATCGTTCATTGAACAATAACAAAGCCATAGTCGGCAACACCGTTATTGTC GACACAGGTTGCGCCAATTT
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MKQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPNVIPALLKLQNAGYRLVMISNQDGLGTPSFPKDDFDAPQDMMMQIL NSQGVLFDDVLICPHFDDENCSCRKPKLGLVKGYLTSGKIDFTQSAVIGDRETDLGLADSMGILGLQYHPETLNWNAIAA KLLNKNRCATVTRTTKETDIRVTVDLDAADKGAINTGIGFFDHMLEQISTHGNFKLDVQVDGDLEIDDHHSVEDTALAIG DALRQALGDKRGIARFGNSLPNDVFQQAIPMDEASASCLLDLSGRPFIKFDGEFDRELVGQLSTEMVPHFFRSFADGLRC TLHISTQGDNDHHKVESLFKVLGRTLRQAVAIEGDALPSSKGVL
Sequences:
>Translated_364_residues MKQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPNVIPALLKLQNAGYRLVMISNQDGLGTPSFPKDDFDAPQDMMMQIL NSQGVLFDDVLICPHFDDENCSCRKPKLGLVKGYLTSGKIDFTQSAVIGDRETDLGLADSMGILGLQYHPETLNWNAIAA KLLNKNRCATVTRTTKETDIRVTVDLDAADKGAINTGIGFFDHMLEQISTHGNFKLDVQVDGDLEIDDHHSVEDTALAIG DALRQALGDKRGIARFGNSLPNDVFQQAIPMDEASASCLLDLSGRPFIKFDGEFDRELVGQLSTEMVPHFFRSFADGLRC TLHISTQGDNDHHKVESLFKVLGRTLRQAVAIEGDALPSSKGVL >Mature_364_residues MKQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPNVIPALLKLQNAGYRLVMISNQDGLGTPSFPKDDFDAPQDMMMQIL NSQGVLFDDVLICPHFDDENCSCRKPKLGLVKGYLTSGKIDFTQSAVIGDRETDLGLADSMGILGLQYHPETLNWNAIAA KLLNKNRCATVTRTTKETDIRVTVDLDAADKGAINTGIGFFDHMLEQISTHGNFKLDVQVDGDLEIDDHHSVEDTALAIG DALRQALGDKRGIARFGNSLPNDVFQQAIPMDEASASCLLDLSGRPFIKFDGEFDRELVGQLSTEMVPHFFRSFADGLRC TLHISTQGDNDHHKVESLFKVLGRTLRQAVAIEGDALPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=364, Percent_Identity=60.989010989011, Blast_Score=453, Evalue=1e-129, Organism=Escherichia coli, GI1786399, Length=140, Percent_Identity=29.2857142857143, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324776, Length=222, Percent_Identity=39.6396396396396, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 40032; Mature: 40032
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPNVIPALLKLQNAGYRLVMISNQDGLG CCCEEEEEECCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCC TPSFPKDDFDAPQDMMMQILNSQGVLFDDVLICPHFDDENCSCRKPKLGLVKGYLTSGKI CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCE DFTQSAVIGDRETDLGLADSMGILGLQYHPETLNWNAIAAKLLNKNRCATVTRTTKETDI ECCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCEE RVTVDLDAADKGAINTGIGFFDHMLEQISTHGNFKLDVQVDGDLEIDDHHSVEDTALAIG EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHH DALRQALGDKRGIARFGNSLPNDVFQQAIPMDEASASCLLDLSGRPFIKFDGEFDRELVG HHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCHHHHH QLSTEMVPHFFRSFADGLRCTLHISTQGDNDHHKVESLFKVLGRTLRQAVAIEGDALPSS HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KGVL CCCC >Mature Secondary Structure MKQKILFIDRDGTLIEEPVTDKQVDSLAKLVFEPNVIPALLKLQNAGYRLVMISNQDGLG CCCEEEEEECCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCC TPSFPKDDFDAPQDMMMQILNSQGVLFDDVLICPHFDDENCSCRKPKLGLVKGYLTSGKI CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCE DFTQSAVIGDRETDLGLADSMGILGLQYHPETLNWNAIAAKLLNKNRCATVTRTTKETDI ECCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCEE RVTVDLDAADKGAINTGIGFFDHMLEQISTHGNFKLDVQVDGDLEIDDHHSVEDTALAIG EEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHH DALRQALGDKRGIARFGNSLPNDVFQQAIPMDEASASCLLDLSGRPFIKFDGEFDRELVG HHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCCHHHHH QLSTEMVPHFFRSFADGLRCTLHISTQGDNDHHKVESLFKVLGRTLRQAVAIEGDALPSS HHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KGVL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]