Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is hisA [H]
Identifier: 157962282
GI number: 157962282
Start: 3004674
End: 3005411
Strand: Direct
Name: hisA [H]
Synonym: Spea_2461
Alternate gene names: 157962282
Gene position: 3004674-3005411 (Clockwise)
Preceding gene: 157962281
Following gene: 157962283
Centisome position: 58.07
GC content: 45.53
Gene sequence:
>738_bases ATGATTATTCCAGCAATCGATCTTATCGATGGTCAAGTTGTTCGCCTCTATCAAGGGGATTATGCCCAGCAGACCACCTT TAATTTAAGCCCATTAGATCAGCTTAAGTCTTACCAGCAGCAAGGTGCCAGCCTACTGCATATCGTCGATCTTACCGGGG CTAAAGAGCCTGATAGACGTCAGACTGCGCTCATTTCAGAGTTAGTCAATAATCTGGATACCCCGATTCAAGTCGGCGGT GGCATTCGCACCGAAGCCCAGTTAAGTGAACTATTAGAGATTGGGGTTAGCCGTGTGGTTATCGGCTCATTGGCCGTAAA AGAGCCTGAATTGGTAAAAAGTTGGTTTACCAAATATGGTAGTGACGCTATCTGCCTAGCCTTAGACGTTAATATTAATG AACAAGGCGAAAAGATTGTCGCGGTATCGGGTTGGCAGTCAGGTGGCGGTAAGAGCTTAGAATCACTTGTGGAAGAATTT AAGTCCGTCGGTTTAAAACATGCCTTAGTGACCGATATTAGCCGTGATGGCACCCTTAAGGGCGCTAATACTGAGCTGTA TTATGAAATCGCGACTCTCTATCCAGAGATCCAATGGCAGGCTTCAGGAGGCATAGCGACTTTAGACGACGTTAATGCGG TAAAACAAAGTGGTGCAACAGGCATCATCATAGGAAAAGCCTTATTAATAAATCAGTTTACCGTTGAGGAGGCTATTGCA TGTTGGCCAAACGCATAG
Upstream 100 bases:
>100_bases AAGTCGGTGCAAGAATGCTTAAAAACTTCCTGACTATGGATCAAGCGACGTTCAGTCCAACAAATAACCAACTGGCGTAT GGCCAGCAAGAGGCGCAGTT
Downstream 100 bases:
>100_bases TTCCCTGCCTCGACGTCAAAGAGGGAAAAGTGGTAAAAGGGGTACAATTTCGAAACCATGAAATAGTCGGTGATATCGTT CCCCTCGCCCAACGCTACGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIIPAIDLIDGQVVRLYQGDYAQQTTFNLSPLDQLKSYQQQGASLLHIVDLTGAKEPDRRQTALISELVNNLDTPIQVGG GIRTEAQLSELLEIGVSRVVIGSLAVKEPELVKSWFTKYGSDAICLALDVNINEQGEKIVAVSGWQSGGGKSLESLVEEF KSVGLKHALVTDISRDGTLKGANTELYYEIATLYPEIQWQASGGIATLDDVNAVKQSGATGIIIGKALLINQFTVEEAIA CWPNA
Sequences:
>Translated_245_residues MIIPAIDLIDGQVVRLYQGDYAQQTTFNLSPLDQLKSYQQQGASLLHIVDLTGAKEPDRRQTALISELVNNLDTPIQVGG GIRTEAQLSELLEIGVSRVVIGSLAVKEPELVKSWFTKYGSDAICLALDVNINEQGEKIVAVSGWQSGGGKSLESLVEEF KSVGLKHALVTDISRDGTLKGANTELYYEIATLYPEIQWQASGGIATLDDVNAVKQSGATGIIIGKALLINQFTVEEAIA CWPNA >Mature_245_residues MIIPAIDLIDGQVVRLYQGDYAQQTTFNLSPLDQLKSYQQQGASLLHIVDLTGAKEPDRRQTALISELVNNLDTPIQVGG GIRTEAQLSELLEIGVSRVVIGSLAVKEPELVKSWFTKYGSDAICLALDVNINEQGEKIVAVSGWQSGGGKSLESLVEEF KSVGLKHALVTDISRDGTLKGANTELYYEIATLYPEIQWQASGGIATLDDVNAVKQSGATGIIIGKALLINQFTVEEAIA CWPNA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=245, Percent_Identity=58.3673469387755, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1788336, Length=219, Percent_Identity=24.2009132420091, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26399; Mature: 26399
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPAIDLIDGQVVRLYQGDYAQQTTFNLSPLDQLKSYQQQGASLLHIVDLTGAKEPDRR CCCCCEECCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHH QTALISELVNNLDTPIQVGGGIRTEAQLSELLEIGVSRVVIGSLAVKEPELVKSWFTKYG HHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC SDAICLALDVNINEQGEKIVAVSGWQSGGGKSLESLVEEFKSVGLKHALVTDISRDGTLK CCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC GANTELYYEIATLYPEIQWQASGGIATLDDVNAVKQSGATGIIIGKALLINQFTVEEAIA CCCCEEEEEEEHHCCCEEEECCCCEEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH CWPNA CCCCC >Mature Secondary Structure MIIPAIDLIDGQVVRLYQGDYAQQTTFNLSPLDQLKSYQQQGASLLHIVDLTGAKEPDRR CCCCCEECCCCCEEEEECCCCCCCEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHH QTALISELVNNLDTPIQVGGGIRTEAQLSELLEIGVSRVVIGSLAVKEPELVKSWFTKYG HHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC SDAICLALDVNINEQGEKIVAVSGWQSGGGKSLESLVEEFKSVGLKHALVTDISRDGTLK CCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC GANTELYYEIATLYPEIQWQASGGIATLDDVNAVKQSGATGIIIGKALLINQFTVEEAIA CCCCEEEEEEEHHCCCEEEECCCCEEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH CWPNA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA