Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962195
Identifier: 157962195
GI number: 157962195
Start: 2895139
End: 2896233
Strand: Direct
Name: 157962195
Synonym: Spea_2374
Alternate gene names: NA
Gene position: 2895139-2896233 (Clockwise)
Preceding gene: 157962194
Following gene: 157962198
Centisome position: 55.95
GC content: 44.29
Gene sequence:
>1095_bases ATGCCCTCAATCATCAAGATCAGCACCCTCGCCGCTGCTCTCTTTTGCGCAAATAGCTTTGCCGCAGACCTTGCTGTCAC AGAGTCAACCAAGAGTCAGGTTTATCAAGGGATCAAAAACAATCTCGAAGAACACCTATTTGAACTGCCACCTCGCGTAC AAGGTCATTATGGCATTCGCCAATACCGTATGACTGGCGATGCTAAGTACGCTAATGCCGCACTCGTTGACCTTTATGCC GTTACCGAGGCACAAGCCTTCTACGCCTGTAATCTAGATAAGGAAAACTTCATCATTGAGCAAGCCGAACAAGCCATATC GGTATTAGGTAAAGGACCTCGCGCTAAGGCTCGCAAGAAAGCACTTCAGCCCTTCCCTGAATTCATCTTCTATACCGATG TATTATTGCGTTACTCAAGTCGTATCGATGAATTTGGATTTACAGGCCCCTGTCATGGCAAGCTTACCGCCGTTTTGAAA AAAGCCGATCTAAAAACCGGTTTAACTGATAAAGCTATGATTGAAACTTGGGCCGCACAGCTAGTGAACTATGTTTACTG GGCTAAACAGATTGGCGTAGGTGACTATCTTGCGGATTATAAGCAAGCCTTTATTGAGGTCTATCCAGATAACAAAGACG ATAAACTCAATAAGAAACAATATCGTAATAAGCTATACGGCATGACCCACTTTATCTTTGCCGCTAGCGAATATTATCAG CATAATGTCGACGCCAAAGAGTTCGCTTGGATCCTCGACCATTTTGAGCACAATATTGATCGCATCTTAGAAGATGCCAC CGACGATATTATTGCCGAAGTGGGGATCAGCTTCTTACTTGCAGGCAAAACTGATCACCCAGTGGTGAAGAAAACCCAGC AGCATATTATTAACGCCTTCGACACTAAGGAGCAGATAATCCCTTCACCGCGAGGAAACCCCGATCTGGTTATTGGTGAA CACCGAAATGTATTAGCCATGATGTTATTGGATTGGCCGGAAAAGTTGCACAAGGGTCCTTATCTGTCAGAGTTAAAGGC GACCAAAAAATATCTTCCGAAACAGGTAACACCGATAAAAAGACAAGCTAAATAA
Upstream 100 bases:
>100_bases TATTTAGTCGTTAATGAATCATCTAATAGCATCGCCAATATACTGCAACTGTTGTTCGATGGACCATTAACCAATGACTC ATTCATCAAAAGGACTCAAC
Downstream 100 bases:
>100_bases CCAACATTAGTTCCGAACATAATAATATCTAACATAACTAGATAGGGCTCAAACCTGAGCTCTATCTAGTCTCATTAAGC ATGTTAAACCATTCATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPSIIKISTLAAALFCANSFAADLAVTESTKSQVYQGIKNNLEEHLFELPPRVQGHYGIRQYRMTGDAKYANAALVDLYA VTEAQAFYACNLDKENFIIEQAEQAISVLGKGPRAKARKKALQPFPEFIFYTDVLLRYSSRIDEFGFTGPCHGKLTAVLK KADLKTGLTDKAMIETWAAQLVNYVYWAKQIGVGDYLADYKQAFIEVYPDNKDDKLNKKQYRNKLYGMTHFIFAASEYYQ HNVDAKEFAWILDHFEHNIDRILEDATDDIIAEVGISFLLAGKTDHPVVKKTQQHIINAFDTKEQIIPSPRGNPDLVIGE HRNVLAMMLLDWPEKLHKGPYLSELKATKKYLPKQVTPIKRQAK
Sequences:
>Translated_364_residues MPSIIKISTLAAALFCANSFAADLAVTESTKSQVYQGIKNNLEEHLFELPPRVQGHYGIRQYRMTGDAKYANAALVDLYA VTEAQAFYACNLDKENFIIEQAEQAISVLGKGPRAKARKKALQPFPEFIFYTDVLLRYSSRIDEFGFTGPCHGKLTAVLK KADLKTGLTDKAMIETWAAQLVNYVYWAKQIGVGDYLADYKQAFIEVYPDNKDDKLNKKQYRNKLYGMTHFIFAASEYYQ HNVDAKEFAWILDHFEHNIDRILEDATDDIIAEVGISFLLAGKTDHPVVKKTQQHIINAFDTKEQIIPSPRGNPDLVIGE HRNVLAMMLLDWPEKLHKGPYLSELKATKKYLPKQVTPIKRQAK >Mature_363_residues PSIIKISTLAAALFCANSFAADLAVTESTKSQVYQGIKNNLEEHLFELPPRVQGHYGIRQYRMTGDAKYANAALVDLYAV TEAQAFYACNLDKENFIIEQAEQAISVLGKGPRAKARKKALQPFPEFIFYTDVLLRYSSRIDEFGFTGPCHGKLTAVLKK ADLKTGLTDKAMIETWAAQLVNYVYWAKQIGVGDYLADYKQAFIEVYPDNKDDKLNKKQYRNKLYGMTHFIFAASEYYQH NVDAKEFAWILDHFEHNIDRILEDATDDIIAEVGISFLLAGKTDHPVVKKTQQHIINAFDTKEQIIPSPRGNPDLVIGEH RNVLAMMLLDWPEKLHKGPYLSELKATKKYLPKQVTPIKRQAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41357; Mature: 41226
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIIKISTLAAALFCANSFAADLAVTESTKSQVYQGIKNNLEEHLFELPPRVQGHYGIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE QYRMTGDAKYANAALVDLYAVTEAQAFYACNLDKENFIIEQAEQAISVLGKGPRAKARKK EEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHH ALQPFPEFIFYTDVLLRYSSRIDEFGFTGPCHGKLTAVLKKADLKTGLTDKAMIETWAAQ HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH LVNYVYWAKQIGVGDYLADYKQAFIEVYPDNKDDKLNKKQYRNKLYGMTHFIFAASEYYQ HHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HNVDAKEFAWILDHFEHNIDRILEDATDDIIAEVGISFLLAGKTDHPVVKKTQQHIINAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH DTKEQIIPSPRGNPDLVIGEHRNVLAMMLLDWPEKLHKGPYLSELKATKKYLPKQVTPIK CCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHH RQAK HCCC >Mature Secondary Structure PSIIKISTLAAALFCANSFAADLAVTESTKSQVYQGIKNNLEEHLFELPPRVQGHYGIR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE QYRMTGDAKYANAALVDLYAVTEAQAFYACNLDKENFIIEQAEQAISVLGKGPRAKARKK EEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHH ALQPFPEFIFYTDVLLRYSSRIDEFGFTGPCHGKLTAVLKKADLKTGLTDKAMIETWAAQ HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH LVNYVYWAKQIGVGDYLADYKQAFIEVYPDNKDDKLNKKQYRNKLYGMTHFIFAASEYYQ HHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HNVDAKEFAWILDHFEHNIDRILEDATDDIIAEVGISFLLAGKTDHPVVKKTQQHIINAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH DTKEQIIPSPRGNPDLVIGEHRNVLAMMLLDWPEKLHKGPYLSELKATKKYLPKQVTPIK CCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHH RQAK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA