Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962194
Identifier: 157962194
GI number: 157962194
Start: 2893452
End: 2895194
Strand: Direct
Name: 157962194
Synonym: Spea_2373
Alternate gene names: NA
Gene position: 2893452-2895194 (Clockwise)
Preceding gene: 157962193
Following gene: 157962195
Centisome position: 55.92
GC content: 43.26
Gene sequence:
>1743_bases ATGCAAAAATACACTTCAGTGCCAACAGTTAAACAATTTACTTGGCTATTAAGCCCATTGTTGTTTTTTGTTTGTTGGTT TAACACGGCAGCTCTGGCTGCCGTGTCTCCAATTCCGCTCCTTGTCGAACAATGTATGGCTTATCGTTTTCCCGATAAGC CATTTAATCATGCAAGCGACAGCCGTACTCTTGCCGTTAAACTCGAACGTGATTTAATTGGTTTTTTTAATATCAATGAC AGAATTAAGTACTATCGACAATTTTCACTCACCTACGCAGACCGAGAGCGCCTGCTACAATGCCAGCTATATTTAGCCGA TGAGTTAGCCCTATTTTTTAAGTCTACTCAGTTTCAGTCAATACGATTTAAACTCGCTGAAAGTGACAACCCTGACGTGC AAGCACTGGCTATGCGCATTAACCGAATTGCTAACAACACCGAAGCTCCCAAATACAAAGCGCAATTACATACCGCCCAA GCGGCATTTAAACAAGGTGTAAGCAGCCAATCACTTAGCCTTAATTTCGCCAACAATAGCTGTAAGCTCCCCCAAAACAA AGATGCTACAAAGGGAGCCGACTTTAATGGCTCATTAGCCAGTTATCTTATCAAGCAGCCTGATCAACAATGCCGCAAAG AAGTGTGGCAAGCCTATCAGGCTCGGGCATCGATTAAGAATAAAAGCTCGTTAGATTTAATTAAGGACTTACGCCAGCAA CAGGCGAAACATTACGGCTTTAACGATTTTGCCAGCGAGCAACTCGACCAGCAATGGCTATCTAACCCTAGCCTGGTTGC AGAATTCTTGCGTGTGCAAACTCAACAAATCGGTATCGCGCCCTGGGATCTCGGCTTCGTCCTATCCAAAGCGAGATCAA CCTCGGTTGAGCCTGTTTTAGCTGAACAATGGTTAATACAGATAGCGGCCAAACTTGAAGCTTTTGGTATTGCCGTGACC CCAATTAACGAAAGGGTGTATCGTGCATACTTAGACGGGCGTTTAATGGGTGAAATCTATCTCAGCCATGCCAAGACAAT CGGTGTAAAGCGGATCCGCCAGTTGGTTGTTGGTCAACAATTTGGCCAAGTCGAGCTATTGCTTAAACCTGAGTTAGATA GTTACCAACAACAAAGTGCTGTAATCGAGTCTATGGCGAAAATTATTACTCAATTTGCCTCTGGGCAGCCATTTTATTTA AATAATACAATAGGAGAAACTCAAGATACCGCACAGATCGACACACTTTGGTTGCAGCAATACCTTCAAAACCAGCTTAT GCCAAAGTTAGCAGCCGACAGCAGAGAAGCCATTGTTCTGAAATATGCCAAACAACTGCAAGTGTTCAGAGCAAAGGTCG CCCTTAATACCTATTTAGCGCCCGGTAGCTTATTAAAATTCGATTTGCATCATGCCTTTACTCAGGCATTTTCGGCCAAC TGGGACAATATCAAGGATGCACCATACACCTTCAGTGCCATCGTCTATGAAGGGCCGCTCTACTATCAAAAGATATGGCA ACAAGCACTTGCAAACGTTATTTACCAATCGACAAAAGACTGTCAGAATCAAAAACTTGTTTTCGATTATTTAGTCGTTA ATGAATCATCTAATAGCATCGCCAATATACTGCAACTGTTGTTCGATGGACCATTAACCAATGACTCATTCATCAAAAGG ACTCAACATGCCCTCAATCATCAAGATCAGCACCCTCGCCGCTGCTCTCTTTTGCGCAAATAG
Upstream 100 bases:
>100_bases CTAGCCATACAGATAGCCAACGGTCGTGGTATATTGCCCAATCTTCGTCATGTTGAAAAAATGGGCAACCACAACATGAC TGTAGAAGAACGTGTGGCGT
Downstream 100 bases:
>100_bases CTTTGCCGCAGACCTTGCTGTCACAGAGTCAACCAAGAGTCAGGTTTATCAAGGGATCAAAAACAATCTCGAAGAACACC TATTTGAACTGCCACCTCGC
Product: peptidase M3A and M3B, thimet/oligopeptidase F
Products: NA
Alternate protein names: Peptidase M3A And M3B Thimet/Oligopeptidase F
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MQKYTSVPTVKQFTWLLSPLLFFVCWFNTAALAAVSPIPLLVEQCMAYRFPDKPFNHASDSRTLAVKLERDLIGFFNIND RIKYYRQFSLTYADRERLLQCQLYLADELALFFKSTQFQSIRFKLAESDNPDVQALAMRINRIANNTEAPKYKAQLHTAQ AAFKQGVSSQSLSLNFANNSCKLPQNKDATKGADFNGSLASYLIKQPDQQCRKEVWQAYQARASIKNKSSLDLIKDLRQQ QAKHYGFNDFASEQLDQQWLSNPSLVAEFLRVQTQQIGIAPWDLGFVLSKARSTSVEPVLAEQWLIQIAAKLEAFGIAVT PINERVYRAYLDGRLMGEIYLSHAKTIGVKRIRQLVVGQQFGQVELLLKPELDSYQQQSAVIESMAKIITQFASGQPFYL NNTIGETQDTAQIDTLWLQQYLQNQLMPKLAADSREAIVLKYAKQLQVFRAKVALNTYLAPGSLLKFDLHHAFTQAFSAN WDNIKDAPYTFSAIVYEGPLYYQKIWQQALANVIYQSTKDCQNQKLVFDYLVVNESSNSIANILQLLFDGPLTNDSFIKR TQHALNHQDQHPRRCSLLRK
Sequences:
>Translated_580_residues MQKYTSVPTVKQFTWLLSPLLFFVCWFNTAALAAVSPIPLLVEQCMAYRFPDKPFNHASDSRTLAVKLERDLIGFFNIND RIKYYRQFSLTYADRERLLQCQLYLADELALFFKSTQFQSIRFKLAESDNPDVQALAMRINRIANNTEAPKYKAQLHTAQ AAFKQGVSSQSLSLNFANNSCKLPQNKDATKGADFNGSLASYLIKQPDQQCRKEVWQAYQARASIKNKSSLDLIKDLRQQ QAKHYGFNDFASEQLDQQWLSNPSLVAEFLRVQTQQIGIAPWDLGFVLSKARSTSVEPVLAEQWLIQIAAKLEAFGIAVT PINERVYRAYLDGRLMGEIYLSHAKTIGVKRIRQLVVGQQFGQVELLLKPELDSYQQQSAVIESMAKIITQFASGQPFYL NNTIGETQDTAQIDTLWLQQYLQNQLMPKLAADSREAIVLKYAKQLQVFRAKVALNTYLAPGSLLKFDLHHAFTQAFSAN WDNIKDAPYTFSAIVYEGPLYYQKIWQQALANVIYQSTKDCQNQKLVFDYLVVNESSNSIANILQLLFDGPLTNDSFIKR TQHALNHQDQHPRRCSLLRK >Mature_580_residues MQKYTSVPTVKQFTWLLSPLLFFVCWFNTAALAAVSPIPLLVEQCMAYRFPDKPFNHASDSRTLAVKLERDLIGFFNIND RIKYYRQFSLTYADRERLLQCQLYLADELALFFKSTQFQSIRFKLAESDNPDVQALAMRINRIANNTEAPKYKAQLHTAQ AAFKQGVSSQSLSLNFANNSCKLPQNKDATKGADFNGSLASYLIKQPDQQCRKEVWQAYQARASIKNKSSLDLIKDLRQQ QAKHYGFNDFASEQLDQQWLSNPSLVAEFLRVQTQQIGIAPWDLGFVLSKARSTSVEPVLAEQWLIQIAAKLEAFGIAVT PINERVYRAYLDGRLMGEIYLSHAKTIGVKRIRQLVVGQQFGQVELLLKPELDSYQQQSAVIESMAKIITQFASGQPFYL NNTIGETQDTAQIDTLWLQQYLQNQLMPKLAADSREAIVLKYAKQLQVFRAKVALNTYLAPGSLLKFDLHHAFTQAFSAN WDNIKDAPYTFSAIVYEGPLYYQKIWQQALANVIYQSTKDCQNQKLVFDYLVVNESSNSIANILQLLFDGPLTNDSFIKR TQHALNHQDQHPRRCSLLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66243; Mature: 66243
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKYTSVPTVKQFTWLLSPLLFFVCWFNTAALAAVSPIPLLVEQCMAYRFPDKPFNHASD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC SRTLAVKLERDLIGFFNINDRIKYYRQFSLTYADRERLLQCQLYLADELALFFKSTQFQS CCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE IRFKLAESDNPDVQALAMRINRIANNTEAPKYKAQLHTAQAAFKQGVSSQSLSLNFANNS EEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC CKLPQNKDATKGADFNGSLASYLIKQPDQQCRKEVWQAYQARASIKNKSSLDLIKDLRQQ CCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QAKHYGFNDFASEQLDQQWLSNPSLVAEFLRVQTQQIGIAPWDLGFVLSKARSTSVEPVL HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH AEQWLIQIAAKLEAFGIAVTPINERVYRAYLDGRLMGEIYLSHAKTIGVKRIRQLVVGQQ HHHHHHHHHHHHHHHCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC FGQVELLLKPELDSYQQQSAVIESMAKIITQFASGQPFYLNNTIGETQDTAQIDTLWLQQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHH YLQNQLMPKLAADSREAIVLKYAKQLQVFRAKVALNTYLAPGSLLKFDLHHAFTQAFSAN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC WDNIKDAPYTFSAIVYEGPLYYQKIWQQALANVIYQSTKDCQNQKLVFDYLVVNESSNSI CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHH ANILQLLFDGPLTNDSFIKRTQHALNHQDQHPRRCSLLRK HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC >Mature Secondary Structure MQKYTSVPTVKQFTWLLSPLLFFVCWFNTAALAAVSPIPLLVEQCMAYRFPDKPFNHASD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC SRTLAVKLERDLIGFFNINDRIKYYRQFSLTYADRERLLQCQLYLADELALFFKSTQFQS CCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE IRFKLAESDNPDVQALAMRINRIANNTEAPKYKAQLHTAQAAFKQGVSSQSLSLNFANNS EEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC CKLPQNKDATKGADFNGSLASYLIKQPDQQCRKEVWQAYQARASIKNKSSLDLIKDLRQQ CCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH QAKHYGFNDFASEQLDQQWLSNPSLVAEFLRVQTQQIGIAPWDLGFVLSKARSTSVEPVL HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHH AEQWLIQIAAKLEAFGIAVTPINERVYRAYLDGRLMGEIYLSHAKTIGVKRIRQLVVGQQ HHHHHHHHHHHHHHHCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC FGQVELLLKPELDSYQQQSAVIESMAKIITQFASGQPFYLNNTIGETQDTAQIDTLWLQQ CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHH YLQNQLMPKLAADSREAIVLKYAKQLQVFRAKVALNTYLAPGSLLKFDLHHAFTQAFSAN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC WDNIKDAPYTFSAIVYEGPLYYQKIWQQALANVIYQSTKDCQNQKLVFDYLVVNESSNSI CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHH ANILQLLFDGPLTNDSFIKRTQHALNHQDQHPRRCSLLRK HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA