| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962042
Identifier: 157962042
GI number: 157962042
Start: 2693454
End: 2694146
Strand: Direct
Name: 157962042
Synonym: Spea_2221
Alternate gene names: NA
Gene position: 2693454-2694146 (Clockwise)
Preceding gene: 157962041
Following gene: 157962043
Centisome position: 52.05
GC content: 50.07
Gene sequence:
>693_bases GTGAATGATTTCAGCCTAATTGGGGCATTTATCGTCGGCGTAATGGGCGCGGGACACTGTATTGGTATGTGCGGTGGCCT TGTCGGGGCATTATCGGCTAACTTACCCAAGAATAGTGGCGCTAATGCTCTGGTATCCCAACTAGGTTACCTGCTGAGTT ACAACAGCGGTCGTATCATCAGTTACGCCACTGCCGGTGCGTTAATTGGTGGCAGTGCCAGTGCCCTTGGAGTCTTGTTC GATGCCGACTCCTATTTACTGGTTTTGCGCATTTTTGCTGGCCTTATGATGATCATCACCGGGCTTTACATCGCACAACT CTGGGCTGGCGTGGTTCAGATTGAGCGTATTGGAAAATTACTGTGGCAATATATCGCCCCAATTGCCAATAAATTCATTC CGATAAAAAACCGCTCCCACGCCTTTATTGCTGGTGCGCTTTGGGGCTGGCTCCCTTGTGGTCTGGTTTATAGCATGTTG ACCTGGGCTGTTGCTGCGGGGAACCCGCTTGAAGGCGCTCTTATCATGCTTTGCTTCGGCCTAGGCACATTACCCGCATT ATTAAGCGCAGGTATTGCAGCAAGCAGCTTTAGCCGCTGGGTGCAGAAGAAAACAGTACGAATAATAAGCGGACTGGCGT TAATCGGTTTCGGAGTACAAACCTTGTACGTGGCGATTAACCAGCTTAACTAG
Upstream 100 bases:
>100_bases AACAGAGTGTGTCGATTCTTTTTGAAGAAGATGAGGCGCCAAAGGAAAAACCACAAGCCAACAAACTCGATGAAAACAAC CCGAGTAAGAAGTCTGCTGA
Downstream 100 bases:
>100_bases CTCCGATTATCAAATTAGTTTAACATAGTAGATGAACAGTCAAAATTGAGAGAGACAATGTCAGCAGATAACAACAAGAA TCGCCGTCAGATGGCGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNDFSLIGAFIVGVMGAGHCIGMCGGLVGALSANLPKNSGANALVSQLGYLLSYNSGRIISYATAGALIGGSASALGVLF DADSYLLVLRIFAGLMMIITGLYIAQLWAGVVQIERIGKLLWQYIAPIANKFIPIKNRSHAFIAGALWGWLPCGLVYSML TWAVAAGNPLEGALIMLCFGLGTLPALLSAGIAASSFSRWVQKKTVRIISGLALIGFGVQTLYVAINQLN
Sequences:
>Translated_230_residues MNDFSLIGAFIVGVMGAGHCIGMCGGLVGALSANLPKNSGANALVSQLGYLLSYNSGRIISYATAGALIGGSASALGVLF DADSYLLVLRIFAGLMMIITGLYIAQLWAGVVQIERIGKLLWQYIAPIANKFIPIKNRSHAFIAGALWGWLPCGLVYSML TWAVAAGNPLEGALIMLCFGLGTLPALLSAGIAASSFSRWVQKKTVRIISGLALIGFGVQTLYVAINQLN >Mature_230_residues MNDFSLIGAFIVGVMGAGHCIGMCGGLVGALSANLPKNSGANALVSQLGYLLSYNSGRIISYATAGALIGGSASALGVLF DADSYLLVLRIFAGLMMIITGLYIAQLWAGVVQIERIGKLLWQYIAPIANKFIPIKNRSHAFIAGALWGWLPCGLVYSML TWAVAAGNPLEGALIMLCFGLGTLPALLSAGIAASSFSRWVQKKTVRIISGLALIGFGVQTLYVAINQLN
Specific function: Unknown
COG id: COG2836
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24070; Mature: 24070
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDFSLIGAFIVGVMGAGHCIGMCGGLVGALSANLPKNSGANALVSQLGYLLSYNSGRII CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEE SYATAGALIGGSASALGVLFDADSYLLVLRIFAGLMMIITGLYIAQLWAGVVQIERIGKL EEEHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWQYIAPIANKFIPIKNRSHAFIAGALWGWLPCGLVYSMLTWAVAAGNPLEGALIMLCFG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LGTLPALLSAGIAASSFSRWVQKKTVRIISGLALIGFGVQTLYVAINQLN HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNDFSLIGAFIVGVMGAGHCIGMCGGLVGALSANLPKNSGANALVSQLGYLLSYNSGRII CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEE SYATAGALIGGSASALGVLFDADSYLLVLRIFAGLMMIITGLYIAQLWAGVVQIERIGKL EEEHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWQYIAPIANKFIPIKNRSHAFIAGALWGWLPCGLVYSMLTWAVAAGNPLEGALIMLCFG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LGTLPALLSAGIAASSFSRWVQKKTVRIISGLALIGFGVQTLYVAINQLN HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA