| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962041
Identifier: 157962041
GI number: 157962041
Start: 2693248
End: 2693457
Strand: Direct
Name: 157962041
Synonym: Spea_2220
Alternate gene names: NA
Gene position: 2693248-2693457 (Clockwise)
Preceding gene: 157962040
Following gene: 157962042
Centisome position: 52.05
GC content: 42.38
Gene sequence:
>210_bases ATGAGTATTATCTATGTCCTGATCCCAATCGCTATGCTTTTCGTGCTCGTCGCGGTAGGTGTATTCTTCTGGGCCGTAAA ATCTGATCAGTTTGATGATTTAGAAAAACAGAGTGTGTCGATTCTTTTTGAAGAAGATGAGGCGCCAAAGGAAAAACCAC AAGCCAACAAACTCGATGAAAACAACCCGAGTAAGAAGTCTGCTGAGTGA
Upstream 100 bases:
>100_bases CCGTGAGCGGCCACGTTGCTCCTTACATCGCTGCATTGGGGATGTCAGCAAGCTCACTCATTGTTGTCAGCAATAGCCTA AGACTGCTTAAGGTTCGTTT
Downstream 100 bases:
>100_bases ATGATTTCAGCCTAATTGGGGCATTTATCGTCGGCGTAATGGGCGCGGGACACTGTATTGGTATGTGCGGTGGCCTTGTC GGGGCATTATCGGCTAACTT
Product: cbb3-type cytochrome oxidase maturation protein
Products: NA
Alternate protein names: Cytochrome Oxidase Maturation Protein Cbb3- Type; Cytochrome Oxidase Maturation -Type; FixS-Like Protein; Cbb3-Type Cytochrome C Oxidase Maturation Protein
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSIIYVLIPIAMLFVLVAVGVFFWAVKSDQFDDLEKQSVSILFEEDEAPKEKPQANKLDENNPSKKSAE
Sequences:
>Translated_69_residues MSIIYVLIPIAMLFVLVAVGVFFWAVKSDQFDDLEKQSVSILFEEDEAPKEKPQANKLDENNPSKKSAE >Mature_68_residues SIIYVLIPIAMLFVLVAVGVFFWAVKSDQFDDLEKQSVSILFEEDEAPKEKPQANKLDENNPSKKSAE
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7802; Mature: 7671
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIYVLIPIAMLFVLVAVGVFFWAVKSDQFDDLEKQSVSILFEEDEAPKEKPQANKLDE CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCCCCCCCCCCC NNPSKKSAE CCCCCCCCC >Mature Secondary Structure SIIYVLIPIAMLFVLVAVGVFFWAVKSDQFDDLEKQSVSILFEEDEAPKEKPQANKLDE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCCCCCCCCCCC NNPSKKSAE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA