| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962004
Identifier: 157962004
GI number: 157962004
Start: 2646480
End: 2647532
Strand: Direct
Name: 157962004
Synonym: Spea_2183
Alternate gene names: NA
Gene position: 2646480-2647532 (Clockwise)
Preceding gene: 157962001
Following gene: 157962005
Centisome position: 51.14
GC content: 43.21
Gene sequence:
>1053_bases ATGCTTTACAATCAAAATCTCGCTGAACGTTTTCCAAAAGGTAGGTTTGCAATGTGGAGCGTTTATAGCTTCACTGGCGC GTCTATTTTAGCCTCTATCATTTTTTCTTTATTGCTTTTCCTTTCGATTGATGACGATCCTGTCATGCAATTATTGTTTG GTGGACTCGCCGTTATTTTTGAACTAGGTAAATTCTTCGCCTGGTATGAAGTCGGTGAGCGCTATTCAAGAAAGAACTTT TTCGGTATGTTTTCCGCGCTTGGCTTTTATGCCGTACTAGCCGCCATCTCCATCGGTGGCTCGATTGGCGGTATTAATAG TGCTACCAATAAAGCCCAAGAGCATGTTCATGTACAGCAGAGTAAAGTGAACGCTTTCAACATGCAGATCGACGCTATCG ATAAGCAGATTGAGCTTAACAACGTTGCGGCAGAAAAGTATATCCAGATGGAGCGCATCGCAACGGGTGTCACTCGTATT CAAAAAGAGAACAACAAACTGCGTGAACAGCAGCAGCAACTCGCTATGCAACGTGACAGTGTTCCGGTTGTTAGCCAAGG CTCTATCGTTGGCCTAATTGAAAGCCTAGCGCTATCACTCAATATCAAAGCTGAAACGGCGCAACTTGGTTTAGTGGTGT TCCTGTCTATTTTATTGGATTTCTTCGCAGCCTTCTTTGTTGGTTTAATTGGTGAAGAGAACCGCTTCAGACAACGATTT AAGCAGCAATCTCAACAGCTAGAGCCTATTACGCTGGATGCTTATCGACGCCTGCATAATGATGACTCCGACTTTATTCC TATTTTCGAGCCAAAGCAGTTACCTGAGGCAGAACCTAAACCTCTATATGAACGCGTTCTAGATGCTCTTGGCAATAATC GAGTTAACTGTAGTAAACGTGCGGTGAGTCAATATTTGAATATTTCTACCGAAGAAGTAGATGAGGTTTTTGCGCGTATG TTCAGTGAAGGCGTAGTGACTAAAAAACCAAACAACCATTACCAATGGCATGGGGTGAATATGGACATTAACCCATCGCC TGAGCCTATTTAA
Upstream 100 bases:
>100_bases AGTGTAAGCTAAATGTTCTTATTCTCAAGTAATTACCTCGTGCATTACTGCTTAGAATTTCATCCGTATTCACTTAGAAC ACCAATATTAGAAGTCCACT
Downstream 100 bases:
>100_bases GCTACCTCAATAGAATAAATGACTCCATCAAAGGAAGCAGCATTAGTTGCTTCCTTTTTTATTGGCTTTTTGTGGTAAAA ACAAGCATAAGCTCCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MLYNQNLAERFPKGRFAMWSVYSFTGASILASIIFSLLLFLSIDDDPVMQLLFGGLAVIFELGKFFAWYEVGERYSRKNF FGMFSALGFYAVLAAISIGGSIGGINSATNKAQEHVHVQQSKVNAFNMQIDAIDKQIELNNVAAEKYIQMERIATGVTRI QKENNKLREQQQQLAMQRDSVPVVSQGSIVGLIESLALSLNIKAETAQLGLVVFLSILLDFFAAFFVGLIGEENRFRQRF KQQSQQLEPITLDAYRRLHNDDSDFIPIFEPKQLPEAEPKPLYERVLDALGNNRVNCSKRAVSQYLNISTEEVDEVFARM FSEGVVTKKPNNHYQWHGVNMDINPSPEPI
Sequences:
>Translated_350_residues MLYNQNLAERFPKGRFAMWSVYSFTGASILASIIFSLLLFLSIDDDPVMQLLFGGLAVIFELGKFFAWYEVGERYSRKNF FGMFSALGFYAVLAAISIGGSIGGINSATNKAQEHVHVQQSKVNAFNMQIDAIDKQIELNNVAAEKYIQMERIATGVTRI QKENNKLREQQQQLAMQRDSVPVVSQGSIVGLIESLALSLNIKAETAQLGLVVFLSILLDFFAAFFVGLIGEENRFRQRF KQQSQQLEPITLDAYRRLHNDDSDFIPIFEPKQLPEAEPKPLYERVLDALGNNRVNCSKRAVSQYLNISTEEVDEVFARM FSEGVVTKKPNNHYQWHGVNMDINPSPEPI >Mature_350_residues MLYNQNLAERFPKGRFAMWSVYSFTGASILASIIFSLLLFLSIDDDPVMQLLFGGLAVIFELGKFFAWYEVGERYSRKNF FGMFSALGFYAVLAAISIGGSIGGINSATNKAQEHVHVQQSKVNAFNMQIDAIDKQIELNNVAAEKYIQMERIATGVTRI QKENNKLREQQQQLAMQRDSVPVVSQGSIVGLIESLALSLNIKAETAQLGLVVFLSILLDFFAAFFVGLIGEENRFRQRF KQQSQQLEPITLDAYRRLHNDDSDFIPIFEPKQLPEAEPKPLYERVLDALGNNRVNCSKRAVSQYLNISTEEVDEVFARM FSEGVVTKKPNNHYQWHGVNMDINPSPEPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39564; Mature: 39564
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYNQNLAERFPKGRFAMWSVYSFTGASILASIIFSLLLFLSIDDDPVMQLLFGGLAVIF CCCCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ELGKFFAWYEVGERYSRKNFFGMFSALGFYAVLAAISIGGSIGGINSATNKAQEHVHVQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SKVNAFNMQIDAIDKQIELNNVAAEKYIQMERIATGVTRIQKENNKLREQQQQLAMQRDS HHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPVVSQGSIVGLIESLALSLNIKAETAQLGLVVFLSILLDFFAAFFVGLIGEENRFRQRF CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KQQSQQLEPITLDAYRRLHNDDSDFIPIFEPKQLPEAEPKPLYERVLDALGNNRVNCSKR HHHHHCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH AVSQYLNISTEEVDEVFARMFSEGVVTKKPNNHYQWHGVNMDINPSPEPI HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECEECCCCCCCCC >Mature Secondary Structure MLYNQNLAERFPKGRFAMWSVYSFTGASILASIIFSLLLFLSIDDDPVMQLLFGGLAVIF CCCCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ELGKFFAWYEVGERYSRKNFFGMFSALGFYAVLAAISIGGSIGGINSATNKAQEHVHVQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SKVNAFNMQIDAIDKQIELNNVAAEKYIQMERIATGVTRIQKENNKLREQQQQLAMQRDS HHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPVVSQGSIVGLIESLALSLNIKAETAQLGLVVFLSILLDFFAAFFVGLIGEENRFRQRF CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KQQSQQLEPITLDAYRRLHNDDSDFIPIFEPKQLPEAEPKPLYERVLDALGNNRVNCSKR HHHHHCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH AVSQYLNISTEEVDEVFARMFSEGVVTKKPNNHYQWHGVNMDINPSPEPI HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA