| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962005
Identifier: 157962005
GI number: 157962005
Start: 2647701
End: 2648342
Strand: Direct
Name: 157962005
Synonym: Spea_2184
Alternate gene names: NA
Gene position: 2647701-2648342 (Clockwise)
Preceding gene: 157962004
Following gene: 157962007
Centisome position: 51.17
GC content: 42.06
Gene sequence:
>642_bases ATGCCAGCTAATCAGATTAATACTCAAGAAGAGCCTTTAACGCTTTATTTTATCTATGACTCTCACTGCCCGTGGAGCTA TGCTGCCACGCCTGTTGTTGAAGAACTGCTTAATGCTTTCGACTATTCAGATGTCCATTTACTGCATTGCGCACATTTCA ACGGTTCTGACGCACCTAAAAAGGCACAGGTTGAGCAGGTTAGTGCACTCAGCAATGTGGAATTTAGTGATGCTTATTCT AAGCAAGTAAGTAATAAGGTGTCTTCAGTTAAGACGGCGAACTTTATGTCTTGGGTGCAGTCTAAGCAAGCTGATAAAGA GTTTGAGTTCCTAAAAGTACTTCAACATCAACACTTTGTTGAAGCCAACCCGTTAAATTCGAGAGACGATTTCGACAAGA TAATTAATCAATATAAATTATCGCCGTCAAATAAGGTGTTTAAAGATGCACTAAGCCATGAGGCAGAAAGTGTGTTAGCG GGTATTGCAGAGATTGGCGAGGCTATTGGCACCAATGCATTCCCAGTATTAGTGATGACATCAGGCGATCAGGCGATCTT TATCGATCACTCGCAACATTTGGCATCGCCAAAAGATGTGGTGGAAATGGTTCGTGCTGAGCTTGCTGATTTAAGCGATT AG
Upstream 100 bases:
>100_bases TTTGTGGTAAAAACAAGCATAAGCTCCAAATTGGTATTTGAATAAAAACAGTAAAGCCCTTAGGATCAAGGCAATTAAAA TATCAATAAGATCTCAGTAA
Downstream 100 bases:
>100_bases TGAGTTAAATACGTCATCATGTGTAAGTGGGCACTCGTACAATAGTTCATGTATATAATGCCCTTGTATATTGCCAGTTG CAGTTGAGTAACCTTGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MPANQINTQEEPLTLYFIYDSHCPWSYAATPVVEELLNAFDYSDVHLLHCAHFNGSDAPKKAQVEQVSALSNVEFSDAYS KQVSNKVSSVKTANFMSWVQSKQADKEFEFLKVLQHQHFVEANPLNSRDDFDKIINQYKLSPSNKVFKDALSHEAESVLA GIAEIGEAIGTNAFPVLVMTSGDQAIFIDHSQHLASPKDVVEMVRAELADLSD
Sequences:
>Translated_213_residues MPANQINTQEEPLTLYFIYDSHCPWSYAATPVVEELLNAFDYSDVHLLHCAHFNGSDAPKKAQVEQVSALSNVEFSDAYS KQVSNKVSSVKTANFMSWVQSKQADKEFEFLKVLQHQHFVEANPLNSRDDFDKIINQYKLSPSNKVFKDALSHEAESVLA GIAEIGEAIGTNAFPVLVMTSGDQAIFIDHSQHLASPKDVVEMVRAELADLSD >Mature_212_residues PANQINTQEEPLTLYFIYDSHCPWSYAATPVVEELLNAFDYSDVHLLHCAHFNGSDAPKKAQVEQVSALSNVEFSDAYSK QVSNKVSSVKTANFMSWVQSKQADKEFEFLKVLQHQHFVEANPLNSRDDFDKIINQYKLSPSNKVFKDALSHEAESVLAG IAEIGEAIGTNAFPVLVMTSGDQAIFIDHSQHLASPKDVVEMVRAELADLSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23721; Mature: 23589
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANQINTQEEPLTLYFIYDSHCPWSYAATPVVEELLNAFDYSDVHLLHCAHFNGSDAPK CCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC KAQVEQVSALSNVEFSDAYSKQVSNKVSSVKTANFMSWVQSKQADKEFEFLKVLQHQHFV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC EANPLNSRDDFDKIINQYKLSPSNKVFKDALSHEAESVLAGIAEIGEAIGTNAFPVLVMT CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SGDQAIFIDHSQHLASPKDVVEMVRAELADLSD CCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure PANQINTQEEPLTLYFIYDSHCPWSYAATPVVEELLNAFDYSDVHLLHCAHFNGSDAPK CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC KAQVEQVSALSNVEFSDAYSKQVSNKVSSVKTANFMSWVQSKQADKEFEFLKVLQHQHFV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC EANPLNSRDDFDKIINQYKLSPSNKVFKDALSHEAESVLAGIAEIGEAIGTNAFPVLVMT CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE SGDQAIFIDHSQHLASPKDVVEMVRAELADLSD CCCCEEEEECHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA