| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ppaC [H]
Identifier: 157962001
GI number: 157962001
Start: 2639909
End: 2640829
Strand: Direct
Name: ppaC [H]
Synonym: Spea_2180
Alternate gene names: 157962001
Gene position: 2639909-2640829 (Clockwise)
Preceding gene: 157961997
Following gene: 157962004
Centisome position: 51.02
GC content: 43.0
Gene sequence:
>921_bases ATGCCAGTTTATGTTGTGGGCCACAAAATCCCAGACTCAGATTCAATTTGTGGTGCTATTGCACTTGCACACCTAAAAAA CCAGATCGGTGAAGCGTCTGTTGCGACTCGTTTAGGTGATATTTCACCTGAGACTGCATTCATTCTTGATAAGTTTGGTT TCGAAGCGCCTGAGCTTAAGCTTAGTTATGCTGGCGAAGAAGTTTACATTGTTGACCATTCAGAACTGACTCAAGCACCT GACGACATCGCAGAAGCGACAATTGTTGGTATTGTTGATCACCATAAACTGGGCGATCTAACAACTTCAACGCCACTAGA GTGCTGGATCCGTCCAGTAGGTTGTAGTAATACCGTCATCAAGATGATGTATGACTTCTACAATGTTGAGATCCCAAAGA ATATCGCTGGCATTATGCTTTGCGCTATTTTAAGTGACACGGTTATTTTCAAGTCGCCAACTTGTACTACAGCCGATATT AAGTGCGTAGAAGCACTTGCTGAAATTGCTGGCATCGAAGACTTTAAAGCCTTAGGCATGGATATGTTTAAAGTGAAGTC TGCGGTTGAAGGCACTCCTGCACGTGACCTTGTTATGCGTGACTTTAAAGACTTCAACATGAACGGTAACCTAGTGGGTA TTGGTCAGTTAGAAGTGATCGATCTTTCAGTATTCGATGACATTAAAGCGGATCTAGAAGCGGATATTGCGGCGCTTAAA GCAGAAGGCAATCGTCACAGCGTACTATTGCTACTGACTGACATCATGAAGGAAGGTTCAGAAATGCTAATCGTCACTGA CGATCTAGCTAAAGTTGAATCGGCATACAACTGCAAGTCAGTAGATAACAAAGTTTGGTTAGATGGTGTACTAAGCCGTA AGAAGCAAGTTGTACCACCACTACAGGATGCTTTCGCTTAA
Upstream 100 bases:
>100_bases TAGCCTTTTGACACAAGAGTTTGCCATCTGAGACCTTTTGCTATTTCCGCATCGAGGAAAACTTTGTTAAAATCGGCGCA AATTAAAGGAGAGCTTTTAT
Downstream 100 bases:
>100_bases TTAAGCAATTCCTGAACAAGATTCAGACATAAAAAAGGCCGAACAGATGTTCGGCCTTTTTGTTGGCTCTTAACTAATGA AAGCTAGTCTTTGGTGTCTC
Product: putative manganese-dependent inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELKLSYAGEEVYIVDHSELTQAP DDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADI KCVEALAEIAGIEDFKALGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPPLQDAFA
Sequences:
>Translated_306_residues MPVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELKLSYAGEEVYIVDHSELTQAP DDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADI KCVEALAEIAGIEDFKALGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPPLQDAFA >Mature_305_residues PVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELKLSYAGEEVYIVDHSELTQAPD DIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADIK CVEALAEIAGIEDFKALGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALKA EGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPPLQDAFA
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase class C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004097 - InterPro: IPR022934 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 33269; Mature: 33137
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELK CCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEE LSYAGEEVYIVDHSELTQAPDDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVI EEECCCEEEEEECHHHHCCCHHHHHEEEEEEECCCCCCCCCCCCCHHHEEEECCCCHHHH KMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADIKCVEALAEIAGIEDFKALGM HHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCH DMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHEE AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPP CCCCCCEEEEEEHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC LQDAFA HHHHCC >Mature Secondary Structure PVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELK CEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEE LSYAGEEVYIVDHSELTQAPDDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVI EEECCCEEEEEECHHHHCCCHHHHHEEEEEEECCCCCCCCCCCCCHHHEEEECCCCHHHH KMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADIKCVEALAEIAGIEDFKALGM HHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCH DMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHEE AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPP CCCCCCEEEEEEHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC LQDAFA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]