Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is ppaC [H]

Identifier: 157962001

GI number: 157962001

Start: 2639909

End: 2640829

Strand: Direct

Name: ppaC [H]

Synonym: Spea_2180

Alternate gene names: 157962001

Gene position: 2639909-2640829 (Clockwise)

Preceding gene: 157961997

Following gene: 157962004

Centisome position: 51.02

GC content: 43.0

Gene sequence:

>921_bases
ATGCCAGTTTATGTTGTGGGCCACAAAATCCCAGACTCAGATTCAATTTGTGGTGCTATTGCACTTGCACACCTAAAAAA
CCAGATCGGTGAAGCGTCTGTTGCGACTCGTTTAGGTGATATTTCACCTGAGACTGCATTCATTCTTGATAAGTTTGGTT
TCGAAGCGCCTGAGCTTAAGCTTAGTTATGCTGGCGAAGAAGTTTACATTGTTGACCATTCAGAACTGACTCAAGCACCT
GACGACATCGCAGAAGCGACAATTGTTGGTATTGTTGATCACCATAAACTGGGCGATCTAACAACTTCAACGCCACTAGA
GTGCTGGATCCGTCCAGTAGGTTGTAGTAATACCGTCATCAAGATGATGTATGACTTCTACAATGTTGAGATCCCAAAGA
ATATCGCTGGCATTATGCTTTGCGCTATTTTAAGTGACACGGTTATTTTCAAGTCGCCAACTTGTACTACAGCCGATATT
AAGTGCGTAGAAGCACTTGCTGAAATTGCTGGCATCGAAGACTTTAAAGCCTTAGGCATGGATATGTTTAAAGTGAAGTC
TGCGGTTGAAGGCACTCCTGCACGTGACCTTGTTATGCGTGACTTTAAAGACTTCAACATGAACGGTAACCTAGTGGGTA
TTGGTCAGTTAGAAGTGATCGATCTTTCAGTATTCGATGACATTAAAGCGGATCTAGAAGCGGATATTGCGGCGCTTAAA
GCAGAAGGCAATCGTCACAGCGTACTATTGCTACTGACTGACATCATGAAGGAAGGTTCAGAAATGCTAATCGTCACTGA
CGATCTAGCTAAAGTTGAATCGGCATACAACTGCAAGTCAGTAGATAACAAAGTTTGGTTAGATGGTGTACTAAGCCGTA
AGAAGCAAGTTGTACCACCACTACAGGATGCTTTCGCTTAA

Upstream 100 bases:

>100_bases
TAGCCTTTTGACACAAGAGTTTGCCATCTGAGACCTTTTGCTATTTCCGCATCGAGGAAAACTTTGTTAAAATCGGCGCA
AATTAAAGGAGAGCTTTTAT

Downstream 100 bases:

>100_bases
TTAAGCAATTCCTGAACAAGATTCAGACATAAAAAAGGCCGAACAGATGTTCGGCCTTTTTGTTGGCTCTTAACTAATGA
AAGCTAGTCTTTGGTGTCTC

Product: putative manganese-dependent inorganic pyrophosphatase

Products: NA

Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELKLSYAGEEVYIVDHSELTQAP
DDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADI
KCVEALAEIAGIEDFKALGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK
AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPPLQDAFA

Sequences:

>Translated_306_residues
MPVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELKLSYAGEEVYIVDHSELTQAP
DDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADI
KCVEALAEIAGIEDFKALGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK
AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPPLQDAFA
>Mature_305_residues
PVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELKLSYAGEEVYIVDHSELTQAPD
DIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVIKMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADIK
CVEALAEIAGIEDFKALGMDMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALKA
EGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPPLQDAFA

Specific function: Unknown

COG id: COG1227

COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PPase class C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004097
- InterPro:   IPR022934
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]

EC number: =3.6.1.1 [H]

Molecular weight: Translated: 33269; Mature: 33137

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELK
CCEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEE
LSYAGEEVYIVDHSELTQAPDDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVI
EEECCCEEEEEECHHHHCCCHHHHHEEEEEEECCCCCCCCCCCCCHHHEEEECCCCHHHH
KMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADIKCVEALAEIAGIEDFKALGM
HHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCH
DMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHEE
AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPP
CCCCCCEEEEEEHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
LQDAFA
HHHHCC
>Mature Secondary Structure 
PVYVVGHKIPDSDSICGAIALAHLKNQIGEASVATRLGDISPETAFILDKFGFEAPELK
CEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCCEE
LSYAGEEVYIVDHSELTQAPDDIAEATIVGIVDHHKLGDLTTSTPLECWIRPVGCSNTVI
EEECCCEEEEEECHHHHCCCHHHHHEEEEEEECCCCCCCCCCCCCHHHEEEECCCCHHHH
KMMYDFYNVEIPKNIAGIMLCAILSDTVIFKSPTCTTADIKCVEALAEIAGIEDFKALGM
HHHHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCH
DMFKVKSAVEGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKADLEADIAALK
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHHEE
AEGNRHSVLLLLTDIMKEGSEMLIVTDDLAKVESAYNCKSVDNKVWLDGVLSRKKQVVPP
CCCCCCEEEEEEHHHHHCCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
LQDAFA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]