| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961696
Identifier: 157961696
GI number: 157961696
Start: 2281416
End: 2283173
Strand: Direct
Name: 157961696
Synonym: Spea_1872
Alternate gene names: NA
Gene position: 2281416-2283173 (Clockwise)
Preceding gene: 157961695
Following gene: 157961699
Centisome position: 44.09
GC content: 33.96
Gene sequence:
>1758_bases ATGAACCTAATAATTGGGCCAAATAACTCTGGGAAATCTAATTTAGCCAAATATTTTTATTACTTAAAAAGTATAGCGTC GGAAGAATTATCTAAAGGTGGGGCCATTTCAGTGGCAACTGAACTTGATGAAAGTCAGACATGGAGTTGGAAAAAAGAAA AAATAGCCTGCGAGATTTTACTTTCAAGCGATAATGCATTTATAGATGAATCTAAGGCTTCATATAAAGTAAGTGAGCAT CAGATTGCTCTTTCTTGTTGTCATGATGTTATCGCAAACACATCAGTTTTAAACATGAAGGTTGGAGGGAAACCAATTTT CAATGACAGTAATTTAATTTGTTCTGATCTAGAGAGCGAAAAGTGGGTTGACCCAACCGACGACATAGCAGGGTTTAACG ATAACAATTTTTATTGGAATCATTTCTTAAACTCAATGGTATTTGTTGATCCAATTCGTCACCACTCTAGAAATTCAGAT AATTCTCAAAGCTACTATTTTGATGGTGCCTTAATCATTAAGGAGCTTAACAAGCTAAGAGTTGATAAAGCAAACCCGTC ATATTGGGCTGGTTATAAAAAACAAATTAAAGATTGGTTAACCGACATACTATCTGAAGTGGTAATTAATATCGACATTG TTGAAAATGAATTACGTCTTGAGTTTCAATCAGGCTTAACCTTTTCACTCGATGAGTTAGGAACAGGTGTTTCTCAAATT GTAATGTTGCTTTCACACCTTTGGATCAATAAAGATGTTCATTTAAATGTCTTTTTAGAAGAACCAGAAGCTAACTTGCA TCCTGAATCAGTGGTTAAACTTGTCAATATATTCGAAAAAGAATTAGTGAACCATAGGTTTTTTATCACTACTCACTCAC CTTCGCTAATTGACTGTATTAATGATAACTGGGCTGTGTACAGAACTTTAAAATCACAAAATGGGGCAAGTTCAATTACC CCAAATGACAATATAATCAAACACTACGAAACATTAGATGCGTTGGGAGTAAAAGCATCTCAAATCCTTCAAGCCAATAC CGTACTCTGGGTTGAAGGACCCAGTGACAGAATTTATTTGAAAAAGTTGATTGATATATTTTCAGATGGTGAATTGCAAG AGGGGAAAGACTATTCCTTCTTATATTTTGGAGGTACAAACCTAGCATCTTTCACTGTTCTTGATGATTTGGATCAGAAT CTGATCAATATTTTAAGCACAAGCAGAAAAGCTTATTTGATAACTGATTCTGATTGTTCTTCACAAACAAGCCGAGATAG CGAGACTTTTAAAACTTATTTAAGCTCTATGCTAGGTAGAGTTCAAGCTGCTAATGCTGACAATACAGGTTTAGATTCAT CTGTAGAAGATTATGTAAAAGTTTGGATTACGGAAGGTCGTGAAATTGAAAATTATATCTGTAAGGACTTGTTATTTGGG GTTTTAACGGAGCAAGGATTCAAACGTGAGTCGATCGGTAAAGGTGAAGAACGAAAGGAGCTGGAATTAACTATTACTCA ATCATCTGATTTTATTTTTGAAAAGTTTAATTCATTCGACAAAGCTATTTCCGATTATTATCAATATCAAGATCAAACTC TGCTTGATGAATCGACAATTAAAAACATCGCTTTAAGTTATGCAAATAAGAAAGTTCCGATTGCGAAAGCAATAGTTAAA AAATTAACAAAGACTCATTGCTCAATACTTGATCTAGAAAGTCAGATGGAACATTTGGTTGCGTTTATTAATAAATAA
Upstream 100 bases:
>100_bases GGCATAAACAGGATAAATCTAAGTGAAAATTGATTCTATAAAGCTTTGTGGCTGGCGCTCATATGACTTAAATGGTATCC ATATAGAGGGTTTGAAGTCA
Downstream 100 bases:
>100_bases CATAATCGGTATAGGCCATTTAATCAGGTAGTCGGAGGTATCTAGCCTCCTCACCACAGGGCGGTCCATTTAGAACACCT AACTAAACTTTCTGGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MNLIIGPNNSGKSNLAKYFYYLKSIASEELSKGGAISVATELDESQTWSWKKEKIACEILLSSDNAFIDESKASYKVSEH QIALSCCHDVIANTSVLNMKVGGKPIFNDSNLICSDLESEKWVDPTDDIAGFNDNNFYWNHFLNSMVFVDPIRHHSRNSD NSQSYYFDGALIIKELNKLRVDKANPSYWAGYKKQIKDWLTDILSEVVINIDIVENELRLEFQSGLTFSLDELGTGVSQI VMLLSHLWINKDVHLNVFLEEPEANLHPESVVKLVNIFEKELVNHRFFITTHSPSLIDCINDNWAVYRTLKSQNGASSIT PNDNIIKHYETLDALGVKASQILQANTVLWVEGPSDRIYLKKLIDIFSDGELQEGKDYSFLYFGGTNLASFTVLDDLDQN LINILSTSRKAYLITDSDCSSQTSRDSETFKTYLSSMLGRVQAANADNTGLDSSVEDYVKVWITEGREIENYICKDLLFG VLTEQGFKRESIGKGEERKELELTITQSSDFIFEKFNSFDKAISDYYQYQDQTLLDESTIKNIALSYANKKVPIAKAIVK KLTKTHCSILDLESQMEHLVAFINK
Sequences:
>Translated_585_residues MNLIIGPNNSGKSNLAKYFYYLKSIASEELSKGGAISVATELDESQTWSWKKEKIACEILLSSDNAFIDESKASYKVSEH QIALSCCHDVIANTSVLNMKVGGKPIFNDSNLICSDLESEKWVDPTDDIAGFNDNNFYWNHFLNSMVFVDPIRHHSRNSD NSQSYYFDGALIIKELNKLRVDKANPSYWAGYKKQIKDWLTDILSEVVINIDIVENELRLEFQSGLTFSLDELGTGVSQI VMLLSHLWINKDVHLNVFLEEPEANLHPESVVKLVNIFEKELVNHRFFITTHSPSLIDCINDNWAVYRTLKSQNGASSIT PNDNIIKHYETLDALGVKASQILQANTVLWVEGPSDRIYLKKLIDIFSDGELQEGKDYSFLYFGGTNLASFTVLDDLDQN LINILSTSRKAYLITDSDCSSQTSRDSETFKTYLSSMLGRVQAANADNTGLDSSVEDYVKVWITEGREIENYICKDLLFG VLTEQGFKRESIGKGEERKELELTITQSSDFIFEKFNSFDKAISDYYQYQDQTLLDESTIKNIALSYANKKVPIAKAIVK KLTKTHCSILDLESQMEHLVAFINK >Mature_585_residues MNLIIGPNNSGKSNLAKYFYYLKSIASEELSKGGAISVATELDESQTWSWKKEKIACEILLSSDNAFIDESKASYKVSEH QIALSCCHDVIANTSVLNMKVGGKPIFNDSNLICSDLESEKWVDPTDDIAGFNDNNFYWNHFLNSMVFVDPIRHHSRNSD NSQSYYFDGALIIKELNKLRVDKANPSYWAGYKKQIKDWLTDILSEVVINIDIVENELRLEFQSGLTFSLDELGTGVSQI VMLLSHLWINKDVHLNVFLEEPEANLHPESVVKLVNIFEKELVNHRFFITTHSPSLIDCINDNWAVYRTLKSQNGASSIT PNDNIIKHYETLDALGVKASQILQANTVLWVEGPSDRIYLKKLIDIFSDGELQEGKDYSFLYFGGTNLASFTVLDDLDQN LINILSTSRKAYLITDSDCSSQTSRDSETFKTYLSSMLGRVQAANADNTGLDSSVEDYVKVWITEGREIENYICKDLLFG VLTEQGFKRESIGKGEERKELELTITQSSDFIFEKFNSFDKAISDYYQYQDQTLLDESTIKNIALSYANKKVPIAKAIVK KLTKTHCSILDLESQMEHLVAFINK
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66277; Mature: 66277
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIIGPNNSGKSNLAKYFYYLKSIASEELSKGGAISVATELDESQTWSWKKEKIACEIL CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEE LSSDNAFIDESKASYKVSEHQIALSCCHDVIANTSVLNMKVGGKPIFNDSNLICSDLESE EECCCCEEECCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCEECCCCCC KWVDPTDDIAGFNDNNFYWNHFLNSMVFVDPIRHHSRNSDNSQSYYFDGALIIKELNKLR CCCCCCHHHCCCCCCCEEHHHHHCCCEEECCHHHCCCCCCCCCEEEECCHHHHHHHHHHC VDKANPSYWAGYKKQIKDWLTDILSEVVINIDIVENELRLEFQSGLTFSLDELGTGVSQI CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEEHHHHCCCHHHH VMLLSHLWINKDVHLNVFLEEPEANLHPESVVKLVNIFEKELVNHRFFITTHSPSLIDCI HHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEC NDNWAVYRTLKSQNGASSITPNDNIIKHYETLDALGVKASQILQANTVLWVEGPSDRIYL CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCHHHH KKLIDIFSDGELQEGKDYSFLYFGGTNLASFTVLDDLDQNLINILSTSRKAYLITDSDCS HHHHHHHCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCC SQTSRDSETFKTYLSSMLGRVQAANADNTGLDSSVEDYVKVWITEGREIENYICKDLLFG CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VLTEQGFKRESIGKGEERKELELTITQSSDFIFEKFNSFDKAISDYYQYQDQTLLDESTI HHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KNIALSYANKKVPIAKAIVKKLTKTHCSILDLESQMEHLVAFINK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLIIGPNNSGKSNLAKYFYYLKSIASEELSKGGAISVATELDESQTWSWKKEKIACEIL CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEE LSSDNAFIDESKASYKVSEHQIALSCCHDVIANTSVLNMKVGGKPIFNDSNLICSDLESE EECCCCEEECCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCEECCCCCC KWVDPTDDIAGFNDNNFYWNHFLNSMVFVDPIRHHSRNSDNSQSYYFDGALIIKELNKLR CCCCCCHHHCCCCCCCEEHHHHHCCCEEECCHHHCCCCCCCCCEEEECCHHHHHHHHHHC VDKANPSYWAGYKKQIKDWLTDILSEVVINIDIVENELRLEFQSGLTFSLDELGTGVSQI CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEEHHHHCCCHHHH VMLLSHLWINKDVHLNVFLEEPEANLHPESVVKLVNIFEKELVNHRFFITTHSPSLIDCI HHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEC NDNWAVYRTLKSQNGASSITPNDNIIKHYETLDALGVKASQILQANTVLWVEGPSDRIYL CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCEEEEEECCCCHHHH KKLIDIFSDGELQEGKDYSFLYFGGTNLASFTVLDDLDQNLINILSTSRKAYLITDSDCS HHHHHHHCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEECCCCC SQTSRDSETFKTYLSSMLGRVQAANADNTGLDSSVEDYVKVWITEGREIENYICKDLLFG CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VLTEQGFKRESIGKGEERKELELTITQSSDFIFEKFNSFDKAISDYYQYQDQTLLDESTI HHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH KNIALSYANKKVPIAKAIVKKLTKTHCSILDLESQMEHLVAFINK HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA