| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961695
Identifier: 157961695
GI number: 157961695
Start: 2279689
End: 2281341
Strand: Direct
Name: 157961695
Synonym: Spea_1871
Alternate gene names: NA
Gene position: 2279689-2281341 (Clockwise)
Preceding gene: 157961694
Following gene: 157961696
Centisome position: 44.06
GC content: 35.87
Gene sequence:
>1653_bases TTGACAACAACATTAAGAGAACAAGCTTTAAAATTCGGTAGAATTAAAGAAGTTGACGGTAGCTCAATTATTCTTCACGC TGAGTTTTTAGAACGTGAATTTGAAGCTGTAAAACATTGTGCTGAGGTTGGTGCTTATGTTAATTGTGGCGGTGCGCACG GCAATACAATTTGTACTATCAGTAAGGTGCAAATCACAGAGGTTGAAAAAACGAAAAGAGCCACTGATGGCTTCGAGATC GTTAGAGAAGAAAGAAAAGTTGTAACCCTTTCAATTTTAGGGTGTGCAGTAGCAGGTAAATTCAGTAGAGGTGTTAAACG CCTCCCTACGATCAATTGTGAAACATATTTTCTAAGCAGCAATCAAGTAAACCAATTGATCGGTATAGACATAGAAGAAG ACCAAGAGCACTTTTGTGTCACGGATGAAAGCGATGACAATCAGACGTACTTAAATCTCGATAAACTCATGGGGCGTCAT ACTGCAATTCTGGGTACAACAGGAAGCGGAAAAAGTTGTACAGTTGCATCTATAGTCCAATCTATTTTGTCTAGTTATGA ATGTCCTCGTATGCTTTTTTTTGATATTCACAATGAATATCCATCAGCATTTGGCTACAACGAAGACACACCGAATACAA ATTTTAAAAATAGGACAAATGCTATTCCTTGGAACGATTTTACACTCCCGTATTGGTTTTTAGATTTAGAAGAGTTTATT GGCGTTTATAATCTCGATTTAGGATCTAATCAGAAAGCTATTATAAAGAAACTAATCACTAAATTAAAAGTCGCTGAAGT AAAAAAGCAGGATATTAAAAAGATTGTTGTTTCGGCGGATACACCTGTGTTCTTTAATATTGACACACTGGTAAGTGAGA TAGATGAAGAGAAAGAATCACAATCTACAGCCGCAAAGAAAGCTCCATATGAAAGTTTAACTTTGAAACTACAAGCTATT CGTCAAGATACAAGATATTCATTCCTACACAGTAAAATTGACTCTGAAACTTCAATAGCTGAGTATTTTGAATTTATTTT AGGGTTAGCAAAAAATGAAAGTTATCTTAATATACTTGATTTAAGTGGCTTACCAGCTGAAGTAAGAGCTGTGTGTGTAG GGGTTATATCAAGACTATGTTTTGATTTCAAATATTGGGATTTAGATCCTGAAAATATCCCTCTAAACTTAATCTTAGAA GAAGCACACACCTATATCCCAGAAGATAGTGATTTAAAGTTCAATATTTCAAAAGAGCGGGTTGAAAGAATTGCTAAAGA AGGCAGAAAATATGGTATTGGTTTGACGGTCGTAACTCAACGACCATCCAATGTTTCTACTACAGTATTATCTCAATGTG GTACGTACATAGCACTCCGACTTACCAATGACCTTGACCAAAATAAGATTAAGAGATTATTGCCTGATACATTGGCTGGT CAAGTAGATTTCTTACCCAGCCTTCGAGATGGTGAGGCATTCGTTTCTGGGGATTCAATTAATTTACCAAGAAAAGTTCA ATTTCGAGTTCCTAACCCAATGCCTAGAAGTAATGATGTTAGGTACCATAAATCTTGGACGATAGGAAAGCCTAGCAATT TTTCACTAAAGGAATTAGTTGACTCTTGGCATAAACAGGATAAATCTAAGTGA
Upstream 100 bases:
>100_bases GTTAATCGTATCGCAACTTATATAGGCGTTAAATGACCTTGCGCAACGTCACTTCACTCTAGTATAAAATACTCTGATAA ATCAATAAGGAAGTTATAAA
Downstream 100 bases:
>100_bases AAATTGATTCTATAAAGCTTTGTGGCTGGCGCTCATATGACTTAAATGGTATCCATATAGAGGGTTTGAAGTCAATGAAC CTAATAATTGGGCCAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTTTLREQALKFGRIKEVDGSSIILHAEFLEREFEAVKHCAEVGAYVNCGGAHGNTICTISKVQITEVEKTKRATDGFEI VREERKVVTLSILGCAVAGKFSRGVKRLPTINCETYFLSSNQVNQLIGIDIEEDQEHFCVTDESDDNQTYLNLDKLMGRH TAILGTTGSGKSCTVASIVQSILSSYECPRMLFFDIHNEYPSAFGYNEDTPNTNFKNRTNAIPWNDFTLPYWFLDLEEFI GVYNLDLGSNQKAIIKKLITKLKVAEVKKQDIKKIVVSADTPVFFNIDTLVSEIDEEKESQSTAAKKAPYESLTLKLQAI RQDTRYSFLHSKIDSETSIAEYFEFILGLAKNESYLNILDLSGLPAEVRAVCVGVISRLCFDFKYWDLDPENIPLNLILE EAHTYIPEDSDLKFNISKERVERIAKEGRKYGIGLTVVTQRPSNVSTTVLSQCGTYIALRLTNDLDQNKIKRLLPDTLAG QVDFLPSLRDGEAFVSGDSINLPRKVQFRVPNPMPRSNDVRYHKSWTIGKPSNFSLKELVDSWHKQDKSK
Sequences:
>Translated_550_residues MTTTLREQALKFGRIKEVDGSSIILHAEFLEREFEAVKHCAEVGAYVNCGGAHGNTICTISKVQITEVEKTKRATDGFEI VREERKVVTLSILGCAVAGKFSRGVKRLPTINCETYFLSSNQVNQLIGIDIEEDQEHFCVTDESDDNQTYLNLDKLMGRH TAILGTTGSGKSCTVASIVQSILSSYECPRMLFFDIHNEYPSAFGYNEDTPNTNFKNRTNAIPWNDFTLPYWFLDLEEFI GVYNLDLGSNQKAIIKKLITKLKVAEVKKQDIKKIVVSADTPVFFNIDTLVSEIDEEKESQSTAAKKAPYESLTLKLQAI RQDTRYSFLHSKIDSETSIAEYFEFILGLAKNESYLNILDLSGLPAEVRAVCVGVISRLCFDFKYWDLDPENIPLNLILE EAHTYIPEDSDLKFNISKERVERIAKEGRKYGIGLTVVTQRPSNVSTTVLSQCGTYIALRLTNDLDQNKIKRLLPDTLAG QVDFLPSLRDGEAFVSGDSINLPRKVQFRVPNPMPRSNDVRYHKSWTIGKPSNFSLKELVDSWHKQDKSK >Mature_549_residues TTTLREQALKFGRIKEVDGSSIILHAEFLEREFEAVKHCAEVGAYVNCGGAHGNTICTISKVQITEVEKTKRATDGFEIV REERKVVTLSILGCAVAGKFSRGVKRLPTINCETYFLSSNQVNQLIGIDIEEDQEHFCVTDESDDNQTYLNLDKLMGRHT AILGTTGSGKSCTVASIVQSILSSYECPRMLFFDIHNEYPSAFGYNEDTPNTNFKNRTNAIPWNDFTLPYWFLDLEEFIG VYNLDLGSNQKAIIKKLITKLKVAEVKKQDIKKIVVSADTPVFFNIDTLVSEIDEEKESQSTAAKKAPYESLTLKLQAIR QDTRYSFLHSKIDSETSIAEYFEFILGLAKNESYLNILDLSGLPAEVRAVCVGVISRLCFDFKYWDLDPENIPLNLILEE AHTYIPEDSDLKFNISKERVERIAKEGRKYGIGLTVVTQRPSNVSTTVLSQCGTYIALRLTNDLDQNKIKRLLPDTLAGQ VDFLPSLRDGEAFVSGDSINLPRKVQFRVPNPMPRSNDVRYHKSWTIGKPSNFSLKELVDSWHKQDKSK
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 62096; Mature: 61965
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLREQALKFGRIKEVDGSSIILHAEFLEREFEAVKHCAEVGAYVNCGGAHGNTICTI CCCCHHHHHHHHCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEE SKVQITEVEKTKRATDGFEIVREERKVVTLSILGCAVAGKFSRGVKRLPTINCETYFLSS EEEEEEHHHHHHHCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECC NQVNQLIGIDIEEDQEHFCVTDESDDNQTYLNLDKLMGRHTAILGTTGSGKSCTVASIVQ CCCCCEEECCCCCCCCCEEECCCCCCCCEEEEHHHHCCCCEEEEEECCCCCCCCHHHHHH SILSSYECPRMLFFDIHNEYPSAFGYNEDTPNTNFKNRTNAIPWNDFTLPYWFLDLEEFI HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHC GVYNLDLGSNQKAIIKKLITKLKVAEVKKQDIKKIVVSADTPVFFNIDTLVSEIDEEKES CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHHHHHH QSTAAKKAPYESLTLKLQAIRQDTRYSFLHSKIDSETSIAEYFEFILGLAKNESYLNILD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEE LSGLPAEVRAVCVGVISRLCFDFKYWDLDPENIPLNLILEEAHTYIPEDSDLKFNISKER CCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEECCHHH VERIAKEGRKYGIGLTVVTQRPSNVSTTVLSQCGTYIALRLTNDLDQNKIKRLLPDTLAG HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHCCHHHCC QVDFLPSLRDGEAFVSGDSINLPRKVQFRVPNPMPRSNDVRYHKSWTIGKPSNFSLKELV CHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCEEECEECCCCCCCCCHHHHH DSWHKQDKSK HHHHHHCCCC >Mature Secondary Structure TTTLREQALKFGRIKEVDGSSIILHAEFLEREFEAVKHCAEVGAYVNCGGAHGNTICTI CCCHHHHHHHHCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEE SKVQITEVEKTKRATDGFEIVREERKVVTLSILGCAVAGKFSRGVKRLPTINCETYFLSS EEEEEEHHHHHHHCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECC NQVNQLIGIDIEEDQEHFCVTDESDDNQTYLNLDKLMGRHTAILGTTGSGKSCTVASIVQ CCCCCEEECCCCCCCCCEEECCCCCCCCEEEEHHHHCCCCEEEEEECCCCCCCCHHHHHH SILSSYECPRMLFFDIHNEYPSAFGYNEDTPNTNFKNRTNAIPWNDFTLPYWFLDLEEFI HHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHC GVYNLDLGSNQKAIIKKLITKLKVAEVKKQDIKKIVVSADTPVFFNIDTLVSEIDEEKES CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHHHHHH QSTAAKKAPYESLTLKLQAIRQDTRYSFLHSKIDSETSIAEYFEFILGLAKNESYLNILD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEE LSGLPAEVRAVCVGVISRLCFDFKYWDLDPENIPLNLILEEAHTYIPEDSDLKFNISKER CCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEHHHHCCCCCCCEEEECCHHH VERIAKEGRKYGIGLTVVTQRPSNVSTTVLSQCGTYIALRLTNDLDQNKIKRLLPDTLAG HHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCEEEEEEECCCCHHHHHHHCCHHHCC QVDFLPSLRDGEAFVSGDSINLPRKVQFRVPNPMPRSNDVRYHKSWTIGKPSNFSLKELV CHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCEEECEECCCCCCCCCHHHHH DSWHKQDKSK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]