Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961055
Identifier: 157961055
GI number: 157961055
Start: 1492366
End: 1493577
Strand: Direct
Name: 157961055
Synonym: Spea_1227
Alternate gene names: NA
Gene position: 1492366-1493577 (Clockwise)
Preceding gene: 157961052
Following gene: 157961056
Centisome position: 28.84
GC content: 47.03
Gene sequence:
>1212_bases ATGTTGAATATTGACGATCCAAAAGCGACTGAAAAGATTCCGGCCATTTTTCGCTTGGGATTTAGACCTTTTTTCTTAGG TGGTGCGGCGGTCGCAATGCTATTCGTGCCTCTATGGCTACTCACCTGGTTTTATCCGCAATACAGCCTGTTCCAAACCG ACTTCTGGGTGAAGGTCGTGCCGTTGTGGTGGCATCCTCATGAGATGTTATTTGGTTTTGCATTGGCGATAGTGTGTGGG TTCTTGCTGACTTCGGTACAGACATGGACTAATCAGCCCGGAATGAAAGGTTGGGCCTTGGCACTGACTTTCTCTTGCTG GCTATTAGCAAGACTGACCCTACTGTTACCTGTTTCTATTCCTCTGTGGCTACCAGCATTGCTCGACTCTTTGTTTTTAA CCTTCACCGCCATCAAGCTTTGGCGCTGCATTTATAAGGTGAAACAGTGGCATAACATCGGCTTTCCTATCATGTTGTTT GTGGCGATGCTGATTAATCTCTTAAGCTATTACGCCCTAAGTGAGAGAGATTTCTCTCTGAGCCAGAATATTTGGCAAGC TATGTTGTGGTGGTTAGGTCTGCTTATCACCATAGTCGGTGGACGTGTGATTCCCTTCTTTACTGCTATGCGTATAAAGG AAACCAAAGCTGAGCCTATCGCACTGCTCGATAGAAGCTTAATCGTTATTATGGTGGCGTTAGTTGTGCAGGCCATTACG CAGTTTATGCCAAAAGAGCTAGAGCAAGTATTACTCTACCTTGCTGGTGGATTACATTTAGTGCGCTGGTCACGTTGGAA GCCGTTGAAGACACTCAAAGAGCCGATGCTCTGGTCGCTGCATATCTCATATGTGCTATTACCTATTACATTATTAGCCA TGGCTTGGAGCATAGATGACACCATGGCCTATCGCCACCTGTTGCATCTATTTGCAATCGGCTCGCTCGCAGGGATCTGT CTATCCATGATCTCCAGAGTTTCCCTAGGCCACACCAGCCGCAATATCTACGAAGGGCCTAATATGGCGCTAGCCTTTGC TTGTTTGCCTATAGCGGCAATCCTGCGTGCTGTGATGCCGATAGTTGCACCAGGTCAATATCAGCTTTGGTTATGGCTAG CGGGAGGACTTTGGTCGTTAGCCTTTGCAATGTTCGTATTTAATTATGCCTCGATACTGTCTAAACCGCGTATCGATGGC CGACCAGGATAG
Upstream 100 bases:
>100_bases TATAATCTAAACCAATAGTGATTGTTATCACGAATAGGCGCAGATACACTGACGATCAAATTAAAAGCTGTATTTTAAAT GCGTGTTTGTGGGGTGGACT
Downstream 100 bases:
>100_bases TTTTCATCCTTAATATGAAGACAGATAGAAAATAGAAAAAAAACAGTTAGATAAATGCTAAATAAAAAGATGATAAGGTT GATAAAAAACAGATGACAGT
Product: NnrS family protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Heme-Cu Protein NnrS; Protein Involved In Response NO; NnrS Transmembrane Protein; Transmembrane Protein; NnrS Dehydrogenase; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; Nnrs Family Protein; ATP Synthase F0 A Subunit; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MLNIDDPKATEKIPAIFRLGFRPFFLGGAAVAMLFVPLWLLTWFYPQYSLFQTDFWVKVVPLWWHPHEMLFGFALAIVCG FLLTSVQTWTNQPGMKGWALALTFSCWLLARLTLLLPVSIPLWLPALLDSLFLTFTAIKLWRCIYKVKQWHNIGFPIMLF VAMLINLLSYYALSERDFSLSQNIWQAMLWWLGLLITIVGGRVIPFFTAMRIKETKAEPIALLDRSLIVIMVALVVQAIT QFMPKELEQVLLYLAGGLHLVRWSRWKPLKTLKEPMLWSLHISYVLLPITLLAMAWSIDDTMAYRHLLHLFAIGSLAGIC LSMISRVSLGHTSRNIYEGPNMALAFACLPIAAILRAVMPIVAPGQYQLWLWLAGGLWSLAFAMFVFNYASILSKPRIDG RPG
Sequences:
>Translated_403_residues MLNIDDPKATEKIPAIFRLGFRPFFLGGAAVAMLFVPLWLLTWFYPQYSLFQTDFWVKVVPLWWHPHEMLFGFALAIVCG FLLTSVQTWTNQPGMKGWALALTFSCWLLARLTLLLPVSIPLWLPALLDSLFLTFTAIKLWRCIYKVKQWHNIGFPIMLF VAMLINLLSYYALSERDFSLSQNIWQAMLWWLGLLITIVGGRVIPFFTAMRIKETKAEPIALLDRSLIVIMVALVVQAIT QFMPKELEQVLLYLAGGLHLVRWSRWKPLKTLKEPMLWSLHISYVLLPITLLAMAWSIDDTMAYRHLLHLFAIGSLAGIC LSMISRVSLGHTSRNIYEGPNMALAFACLPIAAILRAVMPIVAPGQYQLWLWLAGGLWSLAFAMFVFNYASILSKPRIDG RPG >Mature_403_residues MLNIDDPKATEKIPAIFRLGFRPFFLGGAAVAMLFVPLWLLTWFYPQYSLFQTDFWVKVVPLWWHPHEMLFGFALAIVCG FLLTSVQTWTNQPGMKGWALALTFSCWLLARLTLLLPVSIPLWLPALLDSLFLTFTAIKLWRCIYKVKQWHNIGFPIMLF VAMLINLLSYYALSERDFSLSQNIWQAMLWWLGLLITIVGGRVIPFFTAMRIKETKAEPIALLDRSLIVIMVALVVQAIT QFMPKELEQVLLYLAGGLHLVRWSRWKPLKTLKEPMLWSLHISYVLLPITLLAMAWSIDDTMAYRHLLHLFAIGSLAGIC LSMISRVSLGHTSRNIYEGPNMALAFACLPIAAILRAVMPIVAPGQYQLWLWLAGGLWSLAFAMFVFNYASILSKPRIDG RPG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45962; Mature: 45962
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIDDPKATEKIPAIFRLGFRPFFLGGAAVAMLFVPLWLLTWFYPQYSLFQTDFWVKVV CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEE PLWWHPHEMLFGFALAIVCGFLLTSVQTWTNQPGMKGWALALTFSCWLLARLTLLLPVSI EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLWLPALLDSLFLTFTAIKLWRCIYKVKQWHNIGFPIMLFVAMLINLLSYYALSERDFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH SQNIWQAMLWWLGLLITIVGGRVIPFFTAMRIKETKAEPIALLDRSLIVIMVALVVQAIT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QFMPKELEQVLLYLAGGLHLVRWSRWKPLKTLKEPMLWSLHISYVLLPITLLAMAWSIDD HHHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH TMAYRHLLHLFAIGSLAGICLSMISRVSLGHTSRNIYEGPNMALAFACLPIAAILRAVMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IVAPGQYQLWLWLAGGLWSLAFAMFVFNYASILSKPRIDGRPG HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLNIDDPKATEKIPAIFRLGFRPFFLGGAAVAMLFVPLWLLTWFYPQYSLFQTDFWVKVV CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEE PLWWHPHEMLFGFALAIVCGFLLTSVQTWTNQPGMKGWALALTFSCWLLARLTLLLPVSI EEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLWLPALLDSLFLTFTAIKLWRCIYKVKQWHNIGFPIMLFVAMLINLLSYYALSERDFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH SQNIWQAMLWWLGLLITIVGGRVIPFFTAMRIKETKAEPIALLDRSLIVIMVALVVQAIT HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QFMPKELEQVLLYLAGGLHLVRWSRWKPLKTLKEPMLWSLHISYVLLPITLLAMAWSIDD HHHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH TMAYRHLLHLFAIGSLAGICLSMISRVSLGHTSRNIYEGPNMALAFACLPIAAILRAVMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IVAPGQYQLWLWLAGGLWSLAFAMFVFNYASILSKPRIDGRPG HCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA