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The map label for this gene is yhbH [C]

Identifier: 157961052

GI number: 157961052

Start: 1488993

End: 1489349

Strand: Direct

Name: yhbH [C]

Synonym: Spea_1224

Alternate gene names: 157961052

Gene position: 1488993-1489349 (Clockwise)

Preceding gene: 157961046

Following gene: 157961055

Centisome position: 28.78

GC content: 42.58

Gene sequence:

>357_bases
ATGAAAATAAATCTTTCTGGTCACCACGTTGAAATTACAGACGTAGTAAGACAGCATGTCCAAGAGAAGTTTTCGAAGAT
AGAGAGTCATTTTCCAACCCTGATCGCCCTAGATATTATCGTTTCGAAAGAGCACGGCCAGTTCCAGGTTGAAATTAGAA
CCAATTATGAGGGAAGTCGAATTTCGGCGTCTGGTAATGATCCCGTTATGTATCCCGCGATTACCAACGCAGCTAAAAAA
CTCGATGCGGCACTAAAGCATCGTAAAGGTCAACTAAAGGCCGATCTGCATTCTAAGCCTGTTGTGACGACACCTGAGAT
TGCACATGAGAAAGTTCAAGAGATGAACTTAGTCTAA

Upstream 100 bases:

>100_bases
TTTCTTCAAGAATTTGTATAAATTATTTTTAATAAAGCTTGTAATTTAAAGCGAAAGCCTCAAATGTATTAGGTAGAAGT
CATTGTAAAAAGGAAAACCT

Downstream 100 bases:

>100_bases
TCTCCAAGATCGATTCTTGTCATTAGACAATAGATAATAAGCCCCCGCTACCTAACGGTGACGGGGGCTTTTTTTGACCG
TTTTCTATTGGATATTGTTC

Product: sigma 54 modulation protein/30S ribosomal protein S30EA

Products: NA

Alternate protein names: ORF107 [H]

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKINLSGHHVEITDVVRQHVQEKFSKIESHFPTLIALDIIVSKEHGQFQVEIRTNYEGSRISASGNDPVMYPAITNAAKK
LDAALKHRKGQLKADLHSKPVVTTPEIAHEKVQEMNLV

Sequences:

>Translated_118_residues
MKINLSGHHVEITDVVRQHVQEKFSKIESHFPTLIALDIIVSKEHGQFQVEIRTNYEGSRISASGNDPVMYPAITNAAKK
LDAALKHRKGQLKADLHSKPVVTTPEIAHEKVQEMNLV
>Mature_118_residues
MKINLSGHHVEITDVVRQHVQEKFSKIESHFPTLIALDIIVSKEHGQFQVEIRTNYEGSRISASGNDPVMYPAITNAAKK
LDAALKHRKGQLKADLHSKPVVTTPEIAHEKVQEMNLV

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 13229; Mature: 13229

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINLSGHHVEITDVVRQHVQEKFSKIESHFPTLIALDIIVSKEHGQFQVEIRTNYEGSR
CEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEECCCCCE
ISASGNDPVMYPAITNAAKKLDAALKHRKGQLKADLHSKPVVTTPEIAHEKVQEMNLV
EECCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MKINLSGHHVEITDVVRQHVQEKFSKIESHFPTLIALDIIVSKEHGQFQVEIRTNYEGSR
CEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEECCCCCE
ISASGNDPVMYPAITNAAKKLDAALKHRKGQLKADLHSKPVVTTPEIAHEKVQEMNLV
EECCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 3481423 [H]