| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is thiL [H]
Identifier: 157960995
GI number: 157960995
Start: 1411838
End: 1412797
Strand: Direct
Name: thiL [H]
Synonym: Spea_1167
Alternate gene names: 157960995
Gene position: 1411838-1412797 (Clockwise)
Preceding gene: 157960994
Following gene: 157960996
Centisome position: 27.28
GC content: 47.29
Gene sequence:
>960_bases GTGAAAGAATTTCAATTAATCGAAAGTTTCTTTACTGGGCGTGCCCAGTCCCGCAAAGATGTCGTTGTTGGTATTGGCGA TGATTGCGCCATTGTTCAGCCAGCAGACAATAAATCTATTGCCATCTCTTGTGACACCTTAGTGGAAAATGTCCACTTCT TCCCCGATATGCCAGCAGCCGATCTCGGTTATAAGTCCTTGGCGGTGAATCTATCAGATCTAGCCTCTATGGGCGCAGAG CCTGCATGGATGACATTGGCACTGACACTACCTGAGGTCGATGAAACCTGGCTGGCTGAATTCAGTAGCGGCCTGTTTGA TATTGCCGAGTATTACGGCGTGGCATTGATAGGGGGGGATACGACGCGTGGTCCTCGCTCAATTACCATCACCATCAACG GCCAACTTCCAAATAATATCGGCTTGACCCGCAGCGGCGCTAAAAATGGTGATTGGATCTATGTGACGGGCACTTTAGGT GATTCAGCACTGGGTTTAGATCTACTGAGAAATAAAGCCGAAGCGAATGCAGAGGACAGAGCCTATCTTATTCAACGTCA TTATCGACCGACACCGAGAGTATTAGCTGGTCAGTCGCTTAGAAATATCGCCTCAAGTGCCATCGATATCTCAGATGGCA TCATGTCAGATATTCAGCACGTGCTGAAAGCCTCTAATGTGGGCGCAGTAATAAACGTCGACAATATTCCATTGTCTGAG CCACTTAAAGCCAGTGTTTCACCAGAGATGGCACTCAGTTATGCGCTGACAGGCGGTGAAGACTATGAGTTGTTGTTTAC CGTCAATGAAGCGCAAAAAGGCATGCTAGAAGTCGCCTTAGCCGAGTCAGGAGTTAAGTTTACTCAGATAGGGCAGGTGT GCACGGGTGGCCAGTTAAAGCTGCTTAGCGACAATAAACCGTTTGAACCGATAAACTTAGGTTTTGAGCACTTTAATTAA
Upstream 100 bases:
>100_bases TTGAGCAAGCCTTATGGCTTCCTTTTTCGCTTGAGTGACGGCCTGAACTACACTTATCTCATTTCTCCCTGAATACTTAC TCTTATTTGTGATTGGTATT
Downstream 100 bases:
>100_bases TGAATCTACTCTCTAAAGACCCAGTGCTTGCAAAGCTATCACTGAAGAATCCTATACACTTCCTTGCGCTGGGTTTTGGC TCAGGCTTAGCAGCCAAAGC
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKEFQLIESFFTGRAQSRKDVVVGIGDDCAIVQPADNKSIAISCDTLVENVHFFPDMPAADLGYKSLAVNLSDLASMGAE PAWMTLALTLPEVDETWLAEFSSGLFDIAEYYGVALIGGDTTRGPRSITITINGQLPNNIGLTRSGAKNGDWIYVTGTLG DSALGLDLLRNKAEANAEDRAYLIQRHYRPTPRVLAGQSLRNIASSAIDISDGIMSDIQHVLKASNVGAVINVDNIPLSE PLKASVSPEMALSYALTGGEDYELLFTVNEAQKGMLEVALAESGVKFTQIGQVCTGGQLKLLSDNKPFEPINLGFEHFN
Sequences:
>Translated_319_residues MKEFQLIESFFTGRAQSRKDVVVGIGDDCAIVQPADNKSIAISCDTLVENVHFFPDMPAADLGYKSLAVNLSDLASMGAE PAWMTLALTLPEVDETWLAEFSSGLFDIAEYYGVALIGGDTTRGPRSITITINGQLPNNIGLTRSGAKNGDWIYVTGTLG DSALGLDLLRNKAEANAEDRAYLIQRHYRPTPRVLAGQSLRNIASSAIDISDGIMSDIQHVLKASNVGAVINVDNIPLSE PLKASVSPEMALSYALTGGEDYELLFTVNEAQKGMLEVALAESGVKFTQIGQVCTGGQLKLLSDNKPFEPINLGFEHFN >Mature_319_residues MKEFQLIESFFTGRAQSRKDVVVGIGDDCAIVQPADNKSIAISCDTLVENVHFFPDMPAADLGYKSLAVNLSDLASMGAE PAWMTLALTLPEVDETWLAEFSSGLFDIAEYYGVALIGGDTTRGPRSITITINGQLPNNIGLTRSGAKNGDWIYVTGTLG DSALGLDLLRNKAEANAEDRAYLIQRHYRPTPRVLAGQSLRNIASSAIDISDGIMSDIQHVLKASNVGAVINVDNIPLSE PLKASVSPEMALSYALTGGEDYELLFTVNEAQKGMLEVALAESGVKFTQIGQVCTGGQLKLLSDNKPFEPINLGFEHFN
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=318, Percent_Identity=55.9748427672956, Blast_Score=353, Evalue=9e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34302; Mature: 34302
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEFQLIESFFTGRAQSRKDVVVGIGDDCAIVQPADNKSIAISCDTLVENVHFFPDMPAA CCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCC DLGYKSLAVNLSDLASMGAEPAWMTLALTLPEVDETWLAEFSSGLFDIAEYYGVALIGGD CCCCHHEEEEHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHCEEEECCC TTRGPRSITITINGQLPNNIGLTRSGAKNGDWIYVTGTLGDSALGLDLLRNKAEANAEDR CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHH AYLIQRHYRPTPRVLAGQSLRNIASSAIDISDGIMSDIQHVLKASNVGAVINVDNIPLSE HHHHHHCCCCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC PLKASVSPEMALSYALTGGEDYELLFTVNEAQKGMLEVALAESGVKFTQIGQVCTGGQLK CCCCCCCCCCEEEEEECCCCCEEEEEEECCHHCCCEEEEEHHCCCEEEHHCCCCCCCEEE LLSDNKPFEPINLGFEHFN EECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKEFQLIESFFTGRAQSRKDVVVGIGDDCAIVQPADNKSIAISCDTLVENVHFFPDMPAA CCHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEHHHHHHHHHCCCCCCCC DLGYKSLAVNLSDLASMGAEPAWMTLALTLPEVDETWLAEFSSGLFDIAEYYGVALIGGD CCCCHHEEEEHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHCEEEECCC TTRGPRSITITINGQLPNNIGLTRSGAKNGDWIYVTGTLGDSALGLDLLRNKAEANAEDR CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHH AYLIQRHYRPTPRVLAGQSLRNIASSAIDISDGIMSDIQHVLKASNVGAVINVDNIPLSE HHHHHHCCCCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC PLKASVSPEMALSYALTGGEDYELLFTVNEAQKGMLEVALAESGVKFTQIGQVCTGGQLK CCCCCCCCCCEEEEEECCCCCEEEEEEECCHHCCCEEEEEHHCCCEEEHHCCCCCCCEEE LLSDNKPFEPINLGFEHFN EECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]