| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pgpA [H]
Identifier: 157960996
GI number: 157960996
Start: 1412797
End: 1413291
Strand: Direct
Name: pgpA [H]
Synonym: Spea_1168
Alternate gene names: 157960996
Gene position: 1412797-1413291 (Clockwise)
Preceding gene: 157960995
Following gene: 157960999
Centisome position: 27.3
GC content: 48.69
Gene sequence:
>495_bases ATGAATCTACTCTCTAAAGACCCAGTGCTTGCAAAGCTATCACTGAAGAATCCTATACACTTCCTTGCGCTGGGTTTTGG CTCAGGCTTAGCAGCCAAAGCGCCGGGTACTTTTGGCACCTTGGCCGCTATTCCTGTTTTTCTGCTGATGGCACCGCTAA GCTTGCCTTGGTATATCGCCCTAACGGTATTGAGTGTGCTGGCGGGTTTTTATATCTGCGACAAAGCCTCGAAAGATATG GGGGTACACGATCATGGCGCCATAGTCTGGGATGAAGTGGCTGGGCTACTGATCACCATGATAGCCGCGCCAGCGGGTTG GCAATGGTTAGTTGTGGGTTTTGTACTGTTTCGTATCTTCGATATCTTAAAGCCATGGCCAATTCGCTGGCTTGATGCCA AGGTTCACGGTGGCTTCGGCATTATGATTGACGATGTCTTAGCGGGTATTTTTTCCATGCTATGTCTACAAGGCTTAGCC TACTACTTTGCTTAA
Upstream 100 bases:
>100_bases TTACTCAGATAGGGCAGGTGTGCACGGGTGGCCAGTTAAAGCTGCTTAGCGACAATAAACCGTTTGAACCGATAAACTTA GGTTTTGAGCACTTTAATTA
Downstream 100 bases:
>100_bases TCGCATCTGTTAGCATCAAATAGTTAGCAACATAAAAAATGCAGAGCTTAGCTCTGCATTTTGTTTTATGGGTTTTAGTT TTTATAAGTTTTAAAAATTA
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MNLLSKDPVLAKLSLKNPIHFLALGFGSGLAAKAPGTFGTLAAIPVFLLMAPLSLPWYIALTVLSVLAGFYICDKASKDM GVHDHGAIVWDEVAGLLITMIAAPAGWQWLVVGFVLFRIFDILKPWPIRWLDAKVHGGFGIMIDDVLAGIFSMLCLQGLA YYFA
Sequences:
>Translated_164_residues MNLLSKDPVLAKLSLKNPIHFLALGFGSGLAAKAPGTFGTLAAIPVFLLMAPLSLPWYIALTVLSVLAGFYICDKASKDM GVHDHGAIVWDEVAGLLITMIAAPAGWQWLVVGFVLFRIFDILKPWPIRWLDAKVHGGFGIMIDDVLAGIFSMLCLQGLA YYFA >Mature_164_residues MNLLSKDPVLAKLSLKNPIHFLALGFGSGLAAKAPGTFGTLAAIPVFLLMAPLSLPWYIALTVLSVLAGFYICDKASKDM GVHDHGAIVWDEVAGLLITMIAAPAGWQWLVVGFVLFRIFDILKPWPIRWLDAKVHGGFGIMIDDVLAGIFSMLCLQGLA YYFA
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=148, Percent_Identity=54.7297297297297, Blast_Score=169, Evalue=6e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 17762; Mature: 17762
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLSKDPVLAKLSLKNPIHFLALGFGSGLAAKAPGTFGTLAAIPVFLLMAPLSLPWYIA CCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH LTVLSVLAGFYICDKASKDMGVHDHGAIVWDEVAGLLITMIAAPAGWQWLVVGFVLFRIF HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DILKPWPIRWLDAKVHGGFGIMIDDVLAGIFSMLCLQGLAYYFA HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLLSKDPVLAKLSLKNPIHFLALGFGSGLAAKAPGTFGTLAAIPVFLLMAPLSLPWYIA CCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH LTVLSVLAGFYICDKASKDMGVHDHGAIVWDEVAGLLITMIAAPAGWQWLVVGFVLFRIF HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DILKPWPIRWLDAKVHGGFGIMIDDVLAGIFSMLCLQGLAYYFA HHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]