| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960801
Identifier: 157960801
GI number: 157960801
Start: 1184433
End: 1185509
Strand: Direct
Name: 157960801
Synonym: Spea_0973
Alternate gene names: NA
Gene position: 1184433-1185509 (Clockwise)
Preceding gene: 157960800
Following gene: 157960804
Centisome position: 22.89
GC content: 49.4
Gene sequence:
>1077_bases ATGTCGATTTTACTCGATGCGGTGACACGAAATAGTCAGCAAGCTCAAGCGGTAACCCATGATGTGGTGTTAACGCCTAG AGCGCAATATAAGGCAAAACAAGAGTCGGGAAGAGGTCTTAAATACGCCGCAGTTTTTGTCTGTTTAGCGCTGCTAATGG TCGTGGCAGCCTGGTTATTAACACGGTTTATCTACCCAACGCCTAGCCAAGCATCGACAACCAGCCCAGTTGAGAGTATC AGCCAAAATTCGGCGTTAAACAGGACTGAAAGCCAGAGTGGCAGTTTGAATAATGACGAGGGCAAGAGCTTAACCATTCA ATCAAATGAAGACTTGTATGAACCAGAAGGCGAGCAAACTGAGATCCGTCTCGCCGGGAAGGTCGCGCTGCCACTGGCTC AACCTCTGACGGTTACTCAAGGTGTCATGGCGGCTAACTCTGTATCGCCAACAAATAACGTCGGCAACGAGCAGTCTGGT AATTTGATGGCCGCGTTGTTGAAGGCGCAGCAGAGTGTAGAGCAAGTTAGTCAGCCTGTTTCTAATCAAGCTGCTACCCA AGTAAGTAATCAAGCAAGTCACCAATCGAGCAGTCAAGCTGAGCTGGAGCCCATCATTCTCGGTGCAAATAGCAATCAGC GCGGTGACGAGCTGTTAGCGTCGTTAAAGCATCAAGTTGCAGATGCGGCGGCCGATGTCGGTCTTGAAAACACGCCTCCA GCTGATAACAATAACCTGCTAGCGGCATTTGAGGCGGCGCTTAAGGACGTTGAGCGTAATAATTCGGTGGCAACACCCGT GACTGAGCCTAAGCTAGATCCAATCCCAGCAACGCCAAAATCGGATGACATTCCCAAGTATGGTCAGTTACCGGCAGGGC TACAGTTACAAGTTCCAGAGTTCAGTATTAATGCTCATGTGTACTCGAGTGCGCCAGATAACCGCTGGCTCAATGTCGAT GGTGCAGAGCTGCAAGAGGGGGATAGCATCCAAGGTAAGCTGACCATTGTTGAGATCCGCCCAAGAGATGTGGTGTTAGC GATTCAAGGTACCGAATTTAAAGTACCTGCAATTTAA
Upstream 100 bases:
>100_bases TGAGCGCCGATGGCATTGCCGGGACGCAAACCCTGATACAGCTTAACTTGTACTTAAGTGATGCCGGACCGCGTCTAGGT CAAAGCAAGAGGTTGTATTA
Downstream 100 bases:
>100_bases GCTGAGCATATTTACAAATGAAAAAAGGAACACCTAGGTGTTCCTTTTTTGTCGATAGCGTTAACGCTTAGCGGCTTATA CTGATTGGTATAAGATTAAG
Product: general secretion pathway protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSILLDAVTRNSQQAQAVTHDVVLTPRAQYKAKQESGRGLKYAAVFVCLALLMVVAAWLLTRFIYPTPSQASTTSPVESI SQNSALNRTESQSGSLNNDEGKSLTIQSNEDLYEPEGEQTEIRLAGKVALPLAQPLTVTQGVMAANSVSPTNNVGNEQSG NLMAALLKAQQSVEQVSQPVSNQAATQVSNQASHQSSSQAELEPIILGANSNQRGDELLASLKHQVADAAADVGLENTPP ADNNNLLAAFEAALKDVERNNSVATPVTEPKLDPIPATPKSDDIPKYGQLPAGLQLQVPEFSINAHVYSSAPDNRWLNVD GAELQEGDSIQGKLTIVEIRPRDVVLAIQGTEFKVPAI
Sequences:
>Translated_358_residues MSILLDAVTRNSQQAQAVTHDVVLTPRAQYKAKQESGRGLKYAAVFVCLALLMVVAAWLLTRFIYPTPSQASTTSPVESI SQNSALNRTESQSGSLNNDEGKSLTIQSNEDLYEPEGEQTEIRLAGKVALPLAQPLTVTQGVMAANSVSPTNNVGNEQSG NLMAALLKAQQSVEQVSQPVSNQAATQVSNQASHQSSSQAELEPIILGANSNQRGDELLASLKHQVADAAADVGLENTPP ADNNNLLAAFEAALKDVERNNSVATPVTEPKLDPIPATPKSDDIPKYGQLPAGLQLQVPEFSINAHVYSSAPDNRWLNVD GAELQEGDSIQGKLTIVEIRPRDVVLAIQGTEFKVPAI >Mature_357_residues SILLDAVTRNSQQAQAVTHDVVLTPRAQYKAKQESGRGLKYAAVFVCLALLMVVAAWLLTRFIYPTPSQASTTSPVESIS QNSALNRTESQSGSLNNDEGKSLTIQSNEDLYEPEGEQTEIRLAGKVALPLAQPLTVTQGVMAANSVSPTNNVGNEQSGN LMAALLKAQQSVEQVSQPVSNQAATQVSNQASHQSSSQAELEPIILGANSNQRGDELLASLKHQVADAAADVGLENTPPA DNNNLLAAFEAALKDVERNNSVATPVTEPKLDPIPATPKSDDIPKYGQLPAGLQLQVPEFSINAHVYSSAPDNRWLNVDG AELQEGDSIQGKLTIVEIRPRDVVLAIQGTEFKVPAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38131; Mature: 38000
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILLDAVTRNSQQAQAVTHDVVLTPRAQYKAKQESGRGLKYAAVFVCLALLMVVAAWLL CCEEEEHHHCCCHHHHHHHHEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TRFIYPTPSQASTTSPVESISQNSALNRTESQSGSLNNDEGKSLTIQSNEDLYEPEGEQT HHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCE EIRLAGKVALPLAQPLTVTQGVMAANSVSPTNNVGNEQSGNLMAALLKAQQSVEQVSQPV EEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SNQAATQVSNQASHQSSSQAELEPIILGANSNQRGDELLASLKHQVADAAADVGLENTPP HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ADNNNLLAAFEAALKDVERNNSVATPVTEPKLDPIPATPKSDDIPKYGQLPAGLQLQVPE CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC FSINAHVYSSAPDNRWLNVDGAELQEGDSIQGKLTIVEIRPRDVVLAIQGTEFKVPAI EEEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCEEECCCC >Mature Secondary Structure SILLDAVTRNSQQAQAVTHDVVLTPRAQYKAKQESGRGLKYAAVFVCLALLMVVAAWLL CEEEEHHHCCCHHHHHHHHEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TRFIYPTPSQASTTSPVESISQNSALNRTESQSGSLNNDEGKSLTIQSNEDLYEPEGEQT HHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCE EIRLAGKVALPLAQPLTVTQGVMAANSVSPTNNVGNEQSGNLMAALLKAQQSVEQVSQPV EEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SNQAATQVSNQASHQSSSQAELEPIILGANSNQRGDELLASLKHQVADAAADVGLENTPP HHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC ADNNNLLAAFEAALKDVERNNSVATPVTEPKLDPIPATPKSDDIPKYGQLPAGLQLQVPE CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC FSINAHVYSSAPDNRWLNVDGAELQEGDSIQGKLTIVEIRPRDVVLAIQGTEFKVPAI EEEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA