| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is lgt [H]
Identifier: 157960804
GI number: 157960804
Start: 1188205
End: 1189020
Strand: Direct
Name: lgt [H]
Synonym: Spea_0976
Alternate gene names: 157960804
Gene position: 1188205-1189020 (Clockwise)
Preceding gene: 157960801
Following gene: 157960812
Centisome position: 22.96
GC content: 46.32
Gene sequence:
>816_bases ATGCAGAACAATATATTTGGAAGGCTTAGTTTGGACCATTTTATTTGGAATATTGACCCAGTAGCAATCAGCTTTATGGG ACTTAAGGTACATTGGTACGGGATCTTGTTTGCGCTGGCAATAGCGTCAGGCTTTCAGGTGATGAAGCGTATCTATATTA AAGAAAGCTTACCGGTAGAATCGTTAGACAACCTGCTGATGTATTGCGTGGTGGGGATTATTGTCGGTGCGCGCTTGGCG CATTGCCTTTTCTACGACCCTGCGTATTACTTCAGTCATCCGCTGAAAATCTTGGCTATCTGGGAAGGTGGATTGGCTAG CCATGGTGGTGGTTTAGGCGCAATTTTAGCCCTGTACTATTATCAGCGTCAGGTGAAATTGCCTTTCCTATTCTTGCTAG ATCGTTTAGCTATTGCGACGGCCATTTTCGGCTTCTTTGTACGTATGGCAAATTTTGTCAACTCAGAAATTCTGGGTCTA CCAAGCACTGCGCCTTGGGCTATCGTGTTTGAGCGTGTCGACATGTTGCCGCGACACCCGGCTCAGTTGTATGAAGCGAT TGCTTACTTGCTGACCTTCATACTGCTCTGGGCTATCTATAAGCTCACCGATATGAAGCAGAAGCACGGCGCCATCTTTG GCCTGTTCCTGGTGCTCGTATTTAGCTCACGCTTCTTGATTGAGATGGTAAAGGTCAAGCAAGCCGTTTACGCCGATAGC TGGACCTTCAGCGCCGGTCAGTTGTTAAGTATTCCGTTTTTAATCGTGGGTGTAGCGCTGCTACTTATGCCTTATTTGCG AAAAAACAAAGCTTAA
Upstream 100 bases:
>100_bases ATAGCGGATGCTTACACTATTGTGCTTAAGCAAATTTCGCTTAAGCCTTGCCAAATGAGTTACTGACGGGTAAAACTGCG CATGAGTTATCATATTTTCG
Downstream 100 bases:
>100_bases TACTAAGCTGCTTTAGGCAAAAAAAAGCCGTTAGCGTGTTACGCCAACGGCTTTTTTATTGGTTAGCTTTCTAGACTAAC GCGATAGGTGTAAATACGAT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MQNNIFGRLSLDHFIWNIDPVAISFMGLKVHWYGILFALAIASGFQVMKRIYIKESLPVESLDNLLMYCVVGIIVGARLA HCLFYDPAYYFSHPLKILAIWEGGLASHGGGLGAILALYYYQRQVKLPFLFLLDRLAIATAIFGFFVRMANFVNSEILGL PSTAPWAIVFERVDMLPRHPAQLYEAIAYLLTFILLWAIYKLTDMKQKHGAIFGLFLVLVFSSRFLIEMVKVKQAVYADS WTFSAGQLLSIPFLIVGVALLLMPYLRKNKA
Sequences:
>Translated_271_residues MQNNIFGRLSLDHFIWNIDPVAISFMGLKVHWYGILFALAIASGFQVMKRIYIKESLPVESLDNLLMYCVVGIIVGARLA HCLFYDPAYYFSHPLKILAIWEGGLASHGGGLGAILALYYYQRQVKLPFLFLLDRLAIATAIFGFFVRMANFVNSEILGL PSTAPWAIVFERVDMLPRHPAQLYEAIAYLLTFILLWAIYKLTDMKQKHGAIFGLFLVLVFSSRFLIEMVKVKQAVYADS WTFSAGQLLSIPFLIVGVALLLMPYLRKNKA >Mature_271_residues MQNNIFGRLSLDHFIWNIDPVAISFMGLKVHWYGILFALAIASGFQVMKRIYIKESLPVESLDNLLMYCVVGIIVGARLA HCLFYDPAYYFSHPLKILAIWEGGLASHGGGLGAILALYYYQRQVKLPFLFLLDRLAIATAIFGFFVRMANFVNSEILGL PSTAPWAIVFERVDMLPRHPAQLYEAIAYLLTFILLWAIYKLTDMKQKHGAIFGLFLVLVFSSRFLIEMVKVKQAVYADS WTFSAGQLLSIPFLIVGVALLLMPYLRKNKA
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=280, Percent_Identity=28.5714285714286, Blast_Score=117, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30697; Mature: 30697
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNNIFGRLSLDHFIWNIDPVAISFMGLKVHWYGILFALAIASGFQVMKRIYIKESLPVE CCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SLDNLLMYCVVGIIVGARLAHCLFYDPAYYFSHPLKILAIWEGGLASHGGGLGAILALYY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHH YQRQVKLPFLFLLDRLAIATAIFGFFVRMANFVNSEILGLPSTAPWAIVFERVDMLPRHP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCH AQLYEAIAYLLTFILLWAIYKLTDMKQKHGAIFGLFLVLVFSSRFLIEMVKVKQAVYADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WTFSAGQLLSIPFLIVGVALLLMPYLRKNKA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQNNIFGRLSLDHFIWNIDPVAISFMGLKVHWYGILFALAIASGFQVMKRIYIKESLPVE CCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SLDNLLMYCVVGIIVGARLAHCLFYDPAYYFSHPLKILAIWEGGLASHGGGLGAILALYY HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHH YQRQVKLPFLFLLDRLAIATAIFGFFVRMANFVNSEILGLPSTAPWAIVFERVDMLPRHP HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCCH AQLYEAIAYLLTFILLWAIYKLTDMKQKHGAIFGLFLVLVFSSRFLIEMVKVKQAVYADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WTFSAGQLLSIPFLIVGVALLLMPYLRKNKA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA