| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is exeA [H]
Identifier: 157960800
GI number: 157960800
Start: 1182757
End: 1184433
Strand: Direct
Name: exeA [H]
Synonym: Spea_0972
Alternate gene names: 157960800
Gene position: 1182757-1184433 (Clockwise)
Preceding gene: 157960797
Following gene: 157960801
Centisome position: 22.86
GC content: 47.29
Gene sequence:
>1677_bases ATGTATAAGGCTTTCTTTGGCTTAAATGACAATCCATTTTCTATCGCGCCAAACCCTCATTATCTGTTTCTGAGTGATCG GCATAGAGAAGCTTTGGCACATCTTACTTATGGACTGGGTGAGACCGGTGGTTTCGTACTGCTCACGGGTGAAGTGGGGA CGGGTAAGACCACAGTATCTCGCTGTCTATTAAAGCAGCTTCCGGATAATACCGATACCGCGTTTATATTAAACCCCTCA CTTACAGAGTCTGAATTGCTGGCCACACTGTGTGATGAGTTAGGAATTGTTTATGGCGATGAACCTAGCCTCAAACAGCT GACCGATTTAATCAGTAAGTTTTTGCTGGAAAATCACAGTAAAGATCGCAATACGGTATTGATTATCGATGAGGCTCAGC ACTTAAGAGCGGAAGTGCTTGAGCAGTTAAGGTTGTTAACAAATTTAGAAACCGATACTAAGAAGCTGTTGCAGGTGATC TTAATTGGTCAGCCTGAGCTGCAACAGCTACTTAAGCGCCAAGAGCTGCGTCAGTTAGCGCAGCGCATCACCGCCCGTTA TCACCTATTGCCGCTAACACTTGAAGAGGTAGCGCTTTACGTACAGCACCGTTTGCAGGTTGCTGGGCGCCATGAGCCAC TGTTTCATAAGAGTGCGATTAAGGCGCTACATAAATACAGTGGCGGTATTCCAAGATTGATTAACTTGCTGTGTGAGCGG GCATTGATGGCGAGCTATGCGCAGTCTAAGGTGCCTATCGATAACAAGCTGGTACGCCTAGCCTCTGCTGAGGTGTTAGG TGAAGAGCCTGAGAAGAAGAGTTTGCTACTACCTGTGAGTATCGCAGCATCACTACTTGCTACTTTTGGTATTGCGTTTT ATCTGTTTTCACCAGCAGGCAGCATTGCTTCAAGCCCCAGTTCAAATCTAAGTCCAAATACGAATCTGAGCGCAGGTCAA AGTCAAAGCTCGGCTAATACTGCCGATACAGTAACAAGTCAAGCTATGGCTCAGGTTCAAACGGCTAAGCAAGATATCAA CACCCATAGCTTGAGCAGCAGTCAGCGAGTGCTAAATAGCGCTATAGCCCAAAGTCATGAGATAGATACGGCTTATGCCA GTATCTTAGGTCTTTGGGGCAAGGTGCCTTATATCGGTTTATCTGCATGTCAGTCGGCTAAGCAGCAAGGGCTTGATTGC TTTCAGCAGCAGGGCAATTGGCACTCACTTGTGCGACTCAATTACCCTGCGGTTGTCTATTTAGTCGATGATAACAACCA AGCTTTTTATGGCACTGTGGTATCTCGCCAAGGGGAGCAAATTTTGCTGCAGCTTAATGAGCAGCAGCTCTGGGTGAGTC GAGACTGGTTTACGCGACACTTCACTGGCACCTTCGAGATCCTCTGGCAAGCGCCTCAAAATCAGCCTAAAGAAATTGGC CAGTCTGCCAATCAGGCGCAGATCCAATGGTTAGAGAATAGTTTGGCGCGCATTAACGATAGGGCGCCGAGACTGGTCGA TTATTTTGACTCTGAGTTAGAGCAGCAGTTAAAGGCGTTTCAGCGCCAACATGGATTGAGCGCCGATGGCATTGCCGGGA CGCAAACCCTGATACAGCTTAACTTGTACTTAAGTGATGCCGGACCGCGTCTAGGTCAAAGCAAGAGGTTGTATTAA
Upstream 100 bases:
>100_bases AACTTAAGCCTGTGTGTATCTATAATGCATAAAATAATGCATAAAAAGTCCAGCAAGTGACTCGCTGGTTCATCATGGTT TTAAAAGGATAAAAGCTCGC
Downstream 100 bases:
>100_bases TGTCGATTTTACTCGATGCGGTGACACGAAATAGTCAGCAAGCTCAAGCGGTAACCCATGATGTGGTGTTAACGCCTAGA GCGCAATATAAGGCAAAACA
Product: peptidoglycan-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MYKAFFGLNDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLKQLPDNTDTAFILNPS LTESELLATLCDELGIVYGDEPSLKQLTDLISKFLLENHSKDRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVI LIGQPELQQLLKRQELRQLAQRITARYHLLPLTLEEVALYVQHRLQVAGRHEPLFHKSAIKALHKYSGGIPRLINLLCER ALMASYAQSKVPIDNKLVRLASAEVLGEEPEKKSLLLPVSIAASLLATFGIAFYLFSPAGSIASSPSSNLSPNTNLSAGQ SQSSANTADTVTSQAMAQVQTAKQDINTHSLSSSQRVLNSAIAQSHEIDTAYASILGLWGKVPYIGLSACQSAKQQGLDC FQQQGNWHSLVRLNYPAVVYLVDDNNQAFYGTVVSRQGEQILLQLNEQQLWVSRDWFTRHFTGTFEILWQAPQNQPKEIG QSANQAQIQWLENSLARINDRAPRLVDYFDSELEQQLKAFQRQHGLSADGIAGTQTLIQLNLYLSDAGPRLGQSKRLY
Sequences:
>Translated_558_residues MYKAFFGLNDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLKQLPDNTDTAFILNPS LTESELLATLCDELGIVYGDEPSLKQLTDLISKFLLENHSKDRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVI LIGQPELQQLLKRQELRQLAQRITARYHLLPLTLEEVALYVQHRLQVAGRHEPLFHKSAIKALHKYSGGIPRLINLLCER ALMASYAQSKVPIDNKLVRLASAEVLGEEPEKKSLLLPVSIAASLLATFGIAFYLFSPAGSIASSPSSNLSPNTNLSAGQ SQSSANTADTVTSQAMAQVQTAKQDINTHSLSSSQRVLNSAIAQSHEIDTAYASILGLWGKVPYIGLSACQSAKQQGLDC FQQQGNWHSLVRLNYPAVVYLVDDNNQAFYGTVVSRQGEQILLQLNEQQLWVSRDWFTRHFTGTFEILWQAPQNQPKEIG QSANQAQIQWLENSLARINDRAPRLVDYFDSELEQQLKAFQRQHGLSADGIAGTQTLIQLNLYLSDAGPRLGQSKRLY >Mature_558_residues MYKAFFGLNDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLKQLPDNTDTAFILNPS LTESELLATLCDELGIVYGDEPSLKQLTDLISKFLLENHSKDRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVI LIGQPELQQLLKRQELRQLAQRITARYHLLPLTLEEVALYVQHRLQVAGRHEPLFHKSAIKALHKYSGGIPRLINLLCER ALMASYAQSKVPIDNKLVRLASAEVLGEEPEKKSLLLPVSIAASLLATFGIAFYLFSPAGSIASSPSSNLSPNTNLSAGQ SQSSANTADTVTSQAMAQVQTAKQDINTHSLSSSQRVLNSAIAQSHEIDTAYASILGLWGKVPYIGLSACQSAKQQGLDC FQQQGNWHSLVRLNYPAVVYLVDDNNQAFYGTVVSRQGEQILLQLNEQQLWVSRDWFTRHFTGTFEILWQAPQNQPKEIG QSANQAQIQWLENSLARINDRAPRLVDYFDSELEQQLKAFQRQHGLSADGIAGTQTLIQLNLYLSDAGPRLGQSKRLY
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
Organism=Escherichia coli, GI1789720, Length=172, Percent_Identity=29.0697674418605, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 62035; Mature: 62035
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKAFFGLNDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS CCEEEECCCCCCEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH RCLLKQLPDNTDTAFILNPSLTESELLATLCDELGIVYGDEPSLKQLTDLISKFLLENHS HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCC KDRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLKRQELRQLA CCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRITARYHLLPLTLEEVALYVQHRLQVAGRHEPLFHKSAIKALHKYSGGIPRLINLLCER HHHHHHHEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ALMASYAQSKVPIDNKLVRLASAEVLGEEPEKKSLLLPVSIAASLLATFGIAFYLFSPAG HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC SIASSPSSNLSPNTNLSAGQSQSSANTADTVTSQAMAQVQTAKQDINTHSLSSSQRVLNS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH AIAQSHEIDTAYASILGLWGKVPYIGLSACQSAKQQGLDCFQQQGNWHSLVRLNYPAVVY HHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEE LVDDNNQAFYGTVVSRQGEQILLQLNEQQLWVSRDWFTRHFTGTFEILWQAPQNQPKEIG EEECCCCEEEEEHHHCCCCEEEEEECCCCEEEEHHHHHHHCCCEEEEEEECCCCCHHHHC QSANQAQIQWLENSLARINDRAPRLVDYFDSELEQQLKAFQRQHGLSADGIAGTQTLIQL CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE NLYLSDAGPRLGQSKRLY EEEEECCCCCCCCCCCCC >Mature Secondary Structure MYKAFFGLNDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS CCEEEECCCCCCEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH RCLLKQLPDNTDTAFILNPSLTESELLATLCDELGIVYGDEPSLKQLTDLISKFLLENHS HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCC KDRNTVLIIDEAQHLRAEVLEQLRLLTNLETDTKKLLQVILIGQPELQQLLKRQELRQLA CCCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QRITARYHLLPLTLEEVALYVQHRLQVAGRHEPLFHKSAIKALHKYSGGIPRLINLLCER HHHHHHHEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ALMASYAQSKVPIDNKLVRLASAEVLGEEPEKKSLLLPVSIAASLLATFGIAFYLFSPAG HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC SIASSPSSNLSPNTNLSAGQSQSSANTADTVTSQAMAQVQTAKQDINTHSLSSSQRVLNS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH AIAQSHEIDTAYASILGLWGKVPYIGLSACQSAKQQGLDCFQQQGNWHSLVRLNYPAVVY HHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEE LVDDNNQAFYGTVVSRQGEQILLQLNEQQLWVSRDWFTRHFTGTFEILWQAPQNQPKEIG EEECCCCEEEEEHHHCCCCEEEEEECCCCEEEEHHHHHHHCCCEEEEEEECCCCCHHHHC QSANQAQIQWLENSLARINDRAPRLVDYFDSELEQQLKAFQRQHGLSADGIAGTQTLIQL CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE NLYLSDAGPRLGQSKRLY EEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]