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The map label for this gene is 157960725

Identifier: 157960725

GI number: 157960725

Start: 1092755

End: 1093591

Strand: Reverse

Name: 157960725

Synonym: Spea_0897

Alternate gene names: NA

Gene position: 1093591-1092755 (Counterclockwise)

Preceding gene: 157960727

Following gene: 157960724

Centisome position: 21.13

GC content: 50.54

Gene sequence:

>837_bases
ATGTTTGCTTCAGTTCGGCCTGCAGCCGTTGCCGGCCTCTTCTATCCCGCCTCAGCCGATGAGTTAAAGGCGGCACTTGA
TGGCTATCTGACGCAGGCCAGCTCTATCCTAGCTAGAAAAACAGACTGCCAAAATAGCCAAGATGAAAGCTACCCCTCAC
CTAAGGTGCTTATCGTGCCCCACGCGGGCTATCTCTATTCAGGCCAAGTCGCCGCTTATGCTTACGCCCTAATTCAGCCG
CTGGCCGATACAATCAAGAAGGTGCTACTAATTGGCCCCGCCCATCGGGTTTACCTGCAGGGAGGCGCACTGCCTCTAAG
CCGATATTTTGAAACGCCTCTAGGTCAGATACCTATTGCTCCCGACAGCGTTGAGATATTAGGCTGTCAGCAATGCATTT
GCATCTCAGAACTAGCCCACCAGCAAGAACACAGCCTCGAAGTACAACTGCCCTTTCTGCAACATTTTCTCAAGGAGTTT
GAGTTGCTCCCATTGCTAATCGGCGAGAGTGAGCCGAAAGAGATGGCTCTACTGTTAGAGCAGGTATGGGGAGGTAATGA
GACCTTAATTGTGGTGAGTACAGACTTAAGCCATTTTCATCAATATGATGAAGCACTTCGACTCGATAGAGTCACCTGTC
AAAAAATTTTAGCTGGGCAAGGTACTATTCTCTCCGAGCAAGCCTGTGGCTGTTCAAGCCTCAACGCGCTACTTCCACTT
CTTAAGCGCCATCAACTACGCCTCACTCAGTTGAGCTACCAGAACTCAGGCGATACTGCTGGAGACAAAAATCGAGTGGT
GGGCTATGCCAGCTTTGCCAGCTTTGCCAGCCGTTAA

Upstream 100 bases:

>100_bases
TGATTCGACTCCGTGAGCTGCTGTCATGACTAGGCCTTATGGACATTACCTCAGTGTTCTATACTTAAAGCCTAGTTTAA
AATCTTGGGCTAATCAGTCT

Downstream 100 bases:

>100_bases
ACTGACTATTGCCGAAAAGCGCCAACTGCTGAGTTTGGCCCGCATTACACTAACTAAGGCACTTGTGCCCCAGCAGAACT
TGGAAGTAAGCCAAGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFASVRPAAVAGLFYPASADELKAALDGYLTQASSILARKTDCQNSQDESYPSPKVLIVPHAGYLYSGQVAAYAYALIQP
LADTIKKVLLIGPAHRVYLQGGALPLSRYFETPLGQIPIAPDSVEILGCQQCICISELAHQQEHSLEVQLPFLQHFLKEF
ELLPLLIGESEPKEMALLLEQVWGGNETLIVVSTDLSHFHQYDEALRLDRVTCQKILAGQGTILSEQACGCSSLNALLPL
LKRHQLRLTQLSYQNSGDTAGDKNRVVGYASFASFASR

Sequences:

>Translated_278_residues
MFASVRPAAVAGLFYPASADELKAALDGYLTQASSILARKTDCQNSQDESYPSPKVLIVPHAGYLYSGQVAAYAYALIQP
LADTIKKVLLIGPAHRVYLQGGALPLSRYFETPLGQIPIAPDSVEILGCQQCICISELAHQQEHSLEVQLPFLQHFLKEF
ELLPLLIGESEPKEMALLLEQVWGGNETLIVVSTDLSHFHQYDEALRLDRVTCQKILAGQGTILSEQACGCSSLNALLPL
LKRHQLRLTQLSYQNSGDTAGDKNRVVGYASFASFASR
>Mature_278_residues
MFASVRPAAVAGLFYPASADELKAALDGYLTQASSILARKTDCQNSQDESYPSPKVLIVPHAGYLYSGQVAAYAYALIQP
LADTIKKVLLIGPAHRVYLQGGALPLSRYFETPLGQIPIAPDSVEILGCQQCICISELAHQQEHSLEVQLPFLQHFLKEF
ELLPLLIGESEPKEMALLLEQVWGGNETLIVVSTDLSHFHQYDEALRLDRVTCQKILAGQGTILSEQACGCSSLNALLPL
LKRHQLRLTQLSYQNSGDTAGDKNRVVGYASFASFASR

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=214, Percent_Identity=30.8411214953271, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI32566861, Length=252, Percent_Identity=26.984126984127, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25146594, Length=252, Percent_Identity=26.984126984127, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322467, Length=216, Percent_Identity=28.7037037037037, Blast_Score=82, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21357419, Length=204, Percent_Identity=30.3921568627451, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 30388; Mature: 30388

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFASVRPAAVAGLFYPASADELKAALDGYLTQASSILARKTDCQNSQDESYPSPKVLIVP
CCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
HAGYLYSGQVAAYAYALIQPLADTIKKVLLIGPAHRVYLQGGALPLSRYFETPLGQIPIA
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCC
PDSVEILGCQQCICISELAHQQEHSLEVQLPFLQHFLKEFELLPLLIGESEPKEMALLLE
CCCEEEHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
QVWGGNETLIVVSTDLSHFHQYDEALRLDRVTCQKILAGQGTILSEQACGCSSLNALLPL
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHH
LKRHQLRLTQLSYQNSGDTAGDKNRVVGYASFASFASR
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHCC
>Mature Secondary Structure
MFASVRPAAVAGLFYPASADELKAALDGYLTQASSILARKTDCQNSQDESYPSPKVLIVP
CCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
HAGYLYSGQVAAYAYALIQPLADTIKKVLLIGPAHRVYLQGGALPLSRYFETPLGQIPIA
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCC
PDSVEILGCQQCICISELAHQQEHSLEVQLPFLQHFLKEFELLPLLIGESEPKEMALLLE
CCCEEEHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
QVWGGNETLIVVSTDLSHFHQYDEALRLDRVTCQKILAGQGTILSEQACGCSSLNALLPL
HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHH
LKRHQLRLTQLSYQNSGDTAGDKNRVVGYASFASFASR
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11121031 [H]