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The map label for this gene is 157960724

Identifier: 157960724

GI number: 157960724

Start: 1092187

End: 1092786

Strand: Reverse

Name: 157960724

Synonym: Spea_0896

Alternate gene names: NA

Gene position: 1092786-1092187 (Counterclockwise)

Preceding gene: 157960725

Following gene: 157960723

Centisome position: 21.12

GC content: 46.5

Gene sequence:

>600_bases
ATGCCAGCTTTGCCAGCTTTGCCAGCCGTTAAACTGACTATTGCCGAAAAGCGCCAACTGCTGAGTTTGGCCCGCATTAC
ACTAACTAAGGCACTTGTGCCCCAGCAGAACTTGGAAGTAAGCCAAGCCCCGCTCGATGACACACTTAATCGACTTAAAT
TGGGTTGTTTCGTAACTCTTACCCTAGAAGGGGAGCTAAAAGGCTGCATGGGCTGTATAGAGGGAGAGCGCACTCTCACA
GAATTGATCCCCGCATTGGCGAGCAGTAGTGCATTTAGCGATAGACGTTTTCTCCCCCTAGTTGAATCACAACTTAAACC
CCTTTGCATCGAGATCTCACTGCTTTCACAAATGAGTCCCATAGAAGTAAAAGATCAAATGCAATTACAAACCTATCTGC
AAGGCTCATCCCTCGGCCTAGTGTTGAAGGAGGGAGATAGAAAGGCTGTTTTTTTACCTCAAGTTTGGCAACAACTACCT
GAAGCAAAAGACTTTATCGAGGCGCTCAAAGCTAAAGGAGGTTGGGGGAGAAACGAATGGCCTCCTAATATGCAAGTCGA
GGTTTTTAGCGTGACTCAATTTAGTGAAGAAAAGCTGTAG

Upstream 100 bases:

>100_bases
GCGCTACTTCCACTTCTTAAGCGCCATCAACTACGCCTCACTCAGTTGAGCTACCAGAACTCAGGCGATACTGCTGGAGA
CAAAAATCGAGTGGTGGGCT

Downstream 100 bases:

>100_bases
CACCAAGGCCTTAAGTTTACATAAACTTAAAATTATATTAAATTTAACTCAACATCATTACCAGTGAGACTCTGAAAACC
ACTCTGTAATGATACCGAAA

Product: AMMECR1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPALPALPAVKLTIAEKRQLLSLARITLTKALVPQQNLEVSQAPLDDTLNRLKLGCFVTLTLEGELKGCMGCIEGERTLT
ELIPALASSSAFSDRRFLPLVESQLKPLCIEISLLSQMSPIEVKDQMQLQTYLQGSSLGLVLKEGDRKAVFLPQVWQQLP
EAKDFIEALKAKGGWGRNEWPPNMQVEVFSVTQFSEEKL

Sequences:

>Translated_199_residues
MPALPALPAVKLTIAEKRQLLSLARITLTKALVPQQNLEVSQAPLDDTLNRLKLGCFVTLTLEGELKGCMGCIEGERTLT
ELIPALASSSAFSDRRFLPLVESQLKPLCIEISLLSQMSPIEVKDQMQLQTYLQGSSLGLVLKEGDRKAVFLPQVWQQLP
EAKDFIEALKAKGGWGRNEWPPNMQVEVFSVTQFSEEKL
>Mature_198_residues
PALPALPAVKLTIAEKRQLLSLARITLTKALVPQQNLEVSQAPLDDTLNRLKLGCFVTLTLEGELKGCMGCIEGERTLTE
LIPALASSSAFSDRRFLPLVESQLKPLCIEISLLSQMSPIEVKDQMQLQTYLQGSSLGLVLKEGDRKAVFLPQVWQQLPE
AKDFIEALKAKGGWGRNEWPPNMQVEVFSVTQFSEEKL

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 22076; Mature: 21945

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALPALPAVKLTIAEKRQLLSLARITLTKALVPQQNLEVSQAPLDDTLNRLKLGCFVTL
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEEEE
TLEGELKGCMGCIEGERTLTELIPALASSSAFSDRRFLPLVESQLKPLCIEISLLSQMSP
EECCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEHHHCCCC
IEVKDQMQLQTYLQGSSLGLVLKEGDRKAVFLPQVWQQLPEAKDFIEALKAKGGWGRNEW
CCHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
PPNMQVEVFSVTQFSEEKL
CCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
PALPALPAVKLTIAEKRQLLSLARITLTKALVPQQNLEVSQAPLDDTLNRLKLGCFVTL
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEEEE
TLEGELKGCMGCIEGERTLTELIPALASSSAFSDRRFLPLVESQLKPLCIEISLLSQMSP
EECCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEHHHCCCC
IEVKDQMQLQTYLQGSSLGLVLKEGDRKAVFLPQVWQQLPEAKDFIEALKAKGGWGRNEW
CCHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
PPNMQVEVFSVTQFSEEKL
CCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]