| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pldA [H]
Identifier: 157960489
GI number: 157960489
Start: 819752
End: 820717
Strand: Reverse
Name: pldA [H]
Synonym: Spea_0661
Alternate gene names: 157960489
Gene position: 820717-819752 (Counterclockwise)
Preceding gene: 157960496
Following gene: 157960488
Centisome position: 15.86
GC content: 45.24
Gene sequence:
>966_bases ATGAACAAATTAGCTGCGCGACTGTTAGCCATAGGCTTGTGCTGCTCTTTTAACCTTTATGCTCATAGTGAGACCCAAAC TAACAAGGGTGAAGAAAGCGAAACTGAAGCGAGTGATTCCGAGATTGAAGTGAAGCCCAAGCAAGAGGTGTCTTTGGTTG ATAAACGGATCTTGGAAGAAAGCGCAACTGATGATCTGCCTTATGTCATCACCCCCCATAAGGTGAATTATATTCTCCCC GTGACTTACAGTGCCTCGCCCAATATGGCACCTTTTGCAGAAGAAGCAGCCGAGCATCCGTTTACCTTAGATAATATGGA AGCCAAGTTTCAAATCAGCTTTAAGTTTCCACTTTGGCATAACGTCTTTGGCGATAATGGCCACTTGTTTGCGGCCTATA CCAATCAGTCCTATTGGCAGGTGTACAACAAAGAGATCTCCTCGCCATTTAGAGAGACTAACCATGAGCCCGAGATCTTT ATGATCTTTACCAACGACTGGCAACTTGGACCACTGAAAAATTCGTTTTGGGGTTTTGGTGCCGTGCATCAATCAAACGG TCAGTCTGGCTCGCGTTCACGCAGCTGGAACCGTTTATACGGCACCATGGTATTTGATAACGGCCCCTTCGCACTAGAAG CTAAGGCATGGTGGCGCATACCTGAAGATGAAAAGGAAACCCCTGAGTCACCCAAAGGCGATGATAACCCTGATATCACC GACTATATGGGCAATCTTGAACTCACTGGCGTATACGGCTTGGGCGAACACAGGTTCACCCTGATGGTTCGTAACTATAT TCAAAAGCCTAACTATGGCGCACTTGAATTCACCTGGAGCTACCCAATCTTGGGTAACTTAAGGCTTTATACTCAATATT TTAATGGCTACGGTGAAAGTTTAATCGACTACAATGTACATAATCAGCGCATAGGTATCGGGGTTTCGATTAACGACATC TTATAA
Upstream 100 bases:
>100_bases CGTCCAGTTACTAATTTGCTGAATAACTGTTAATACGACAGGCGGCTAGGTAGAATCTGCCACATAAGAAGAAACAGCTT AAATAAATTCAGGGAATACG
Downstream 100 bases:
>100_bases TCGACTAGGTTAGCTCGATATCAAAAGCGTCTTTAGCAGGCTAAAAGTATAAGCTTTCAGCCTGCCTTAACAAGGATGGT TATGACTTTGAGCTATAAAA
Product: phospholipase A(1)
Products: NA
Alternate protein names: Detergent-resistant phospholipase A; DR-phospholipase A; Outer membrane phospholipase A; OM PLA; Phosphatidylcholine 1-acylhydrolase [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNKLAARLLAIGLCCSFNLYAHSETQTNKGEESETEASDSEIEVKPKQEVSLVDKRILEESATDDLPYVITPHKVNYILP VTYSASPNMAPFAEEAAEHPFTLDNMEAKFQISFKFPLWHNVFGDNGHLFAAYTNQSYWQVYNKEISSPFRETNHEPEIF MIFTNDWQLGPLKNSFWGFGAVHQSNGQSGSRSRSWNRLYGTMVFDNGPFALEAKAWWRIPEDEKETPESPKGDDNPDIT DYMGNLELTGVYGLGEHRFTLMVRNYIQKPNYGALEFTWSYPILGNLRLYTQYFNGYGESLIDYNVHNQRIGIGVSINDI L
Sequences:
>Translated_321_residues MNKLAARLLAIGLCCSFNLYAHSETQTNKGEESETEASDSEIEVKPKQEVSLVDKRILEESATDDLPYVITPHKVNYILP VTYSASPNMAPFAEEAAEHPFTLDNMEAKFQISFKFPLWHNVFGDNGHLFAAYTNQSYWQVYNKEISSPFRETNHEPEIF MIFTNDWQLGPLKNSFWGFGAVHQSNGQSGSRSRSWNRLYGTMVFDNGPFALEAKAWWRIPEDEKETPESPKGDDNPDIT DYMGNLELTGVYGLGEHRFTLMVRNYIQKPNYGALEFTWSYPILGNLRLYTQYFNGYGESLIDYNVHNQRIGIGVSINDI L >Mature_321_residues MNKLAARLLAIGLCCSFNLYAHSETQTNKGEESETEASDSEIEVKPKQEVSLVDKRILEESATDDLPYVITPHKVNYILP VTYSASPNMAPFAEEAAEHPFTLDNMEAKFQISFKFPLWHNVFGDNGHLFAAYTNQSYWQVYNKEISSPFRETNHEPEIF MIFTNDWQLGPLKNSFWGFGAVHQSNGQSGSRSRSWNRLYGTMVFDNGPFALEAKAWWRIPEDEKETPESPKGDDNPDIT DYMGNLELTGVYGLGEHRFTLMVRNYIQKPNYGALEFTWSYPILGNLRLYTQYFNGYGESLIDYNVHNQRIGIGVSINDI L
Specific function: Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities [H]
COG id: COG2829
COG function: function code M; Outer membrane phospholipase A
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein. Note=One of the very few enzymes located there (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phospholipase A1 family [H]
Homologues:
Organism=Escherichia coli, GI2367300, Length=286, Percent_Identity=37.7622377622378, Blast_Score=187, Evalue=7e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003187 [H]
Pfam domain/function: PF02253 PLA1 [H]
EC number: =3.1.1.32; =3.1.1.4 [H]
Molecular weight: Translated: 36719; Mature: 36719
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLAARLLAIGLCCSFNLYAHSETQTNKGEESETEASDSEIEVKPKQEVSLVDKRILEE CCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH SATDDLPYVITPHKVNYILPVTYSASPNMAPFAEEAAEHPFTLDNMEAKFQISFKFPLWH CCCCCCCEEECCCCEEEEEEEEECCCCCCCCCHHHHHCCCEEECCCCEEEEEEEECCHHH NVFGDNGHLFAAYTNQSYWQVYNKEISSPFRETNHEPEIFMIFTNDWQLGPLKNSFWGFG HCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHCCCCCEEEEEEECCEEECCCCCCCCCCC AVHQSNGQSGSRSRSWNRLYGTMVFDNGPFALEAKAWWRIPEDEKETPESPKGDDNPDIT EEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEHEEECCCCCCCCCCCCCCCCCCCCHH DYMGNLELTGVYGLGEHRFTLMVRNYIQKPNYGALEFTWSYPILGNLRLYTQYFNGYGES HHCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCC LIDYNVHNQRIGIGVSINDIL EEEECCCCCEEEEEEEHHCCC >Mature Secondary Structure MNKLAARLLAIGLCCSFNLYAHSETQTNKGEESETEASDSEIEVKPKQEVSLVDKRILEE CCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHH SATDDLPYVITPHKVNYILPVTYSASPNMAPFAEEAAEHPFTLDNMEAKFQISFKFPLWH CCCCCCCEEECCCCEEEEEEEEECCCCCCCCCHHHHHCCCEEECCCCEEEEEEEECCHHH NVFGDNGHLFAAYTNQSYWQVYNKEISSPFRETNHEPEIFMIFTNDWQLGPLKNSFWGFG HCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHCCCCCEEEEEEECCEEECCCCCCCCCCC AVHQSNGQSGSRSRSWNRLYGTMVFDNGPFALEAKAWWRIPEDEKETPESPKGDDNPDIT EEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEHEEECCCCCCCCCCCCCCCCCCCCHH DYMGNLELTGVYGLGEHRFTLMVRNYIQKPNYGALEFTWSYPILGNLRLYTQYFNGYGES HHCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCCEEEEEEHHHCCCCC LIDYNVHNQRIGIGVSINDIL EEEECCCCCEEEEEEEHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8300539 [H]