| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960488
Identifier: 157960488
GI number: 157960488
Start: 818174
End: 819670
Strand: Reverse
Name: 157960488
Synonym: Spea_0660
Alternate gene names: NA
Gene position: 819670-818174 (Counterclockwise)
Preceding gene: 157960489
Following gene: 157960487
Centisome position: 15.84
GC content: 47.76
Gene sequence:
>1497_bases ATGACTTTGAGCTATAAAAGCATATTTGGCGCTTTCACCCTAGTTATCAGCTTGAGTGCTGCCCTACTCAGCTACCAGCT TTTCTTCCCCAAACAGATCAAAACCGAGCTCAATCATAGGCAATATCAGCAAGATCTGCTTATGTTTCTCGAAGCGACTA AGCAACACTCGGCGTTTGCCGCCATTGAACCTCAGCGCCTTATCACTATCACAGAAACTGCAAGCAGACTGATGCTAGAG GCTAGCGGCTTTAATCACTCAACCCTGTTACAACAACAGCTACAGCAACTACTTAGCCAGCTCAATGACCCCGCAGCCAT TGCTCTCGCTCATAATTCCACCAGTCTCGAAATGCTTCCTTTCGAGCCAATATTTGATGGTCAAAACTGGCAAGCATTCA CCCCACAAGGCAGGCTCATGGAGCCAGACTTCCCCTATCTGTCACACATAGATGGGATCCCGATTAGCCGCTGGGTACAG GCAAGCCAGCACTATTTGACTAACGCCCTAAAACACTCCAGCGTGGCGCAAGCAACTTGGATAAAGCAAATTGGCCAACT TAGAGCAGAGATAGGTCTTAGAGCCAGCAATGAGTCTGTGATAACCCTTAGCGATGGCGAAACCAGCGTGCAGCGTTCGC TGAGCTTAGTGCAACACAACAAGCTACAAACCAAAGTGCCTGTGAAGCAAGATAAGGCAAGCACAAGCCAAGCTCAAATT TTTCGCTTACCCTCACAGGTCGATGCCGAGACCTTGCTAAGCCTGACCCATCAACTAACCTCACAGCAAGCAGATGACCA TATCGGCTCGCCATCTTCAGCTTTGATTATCGACATACGTGAGATTAAGCAGCCACAACAGCAACTCACAGCATGGCTAA GTAAACACTTTAGCCATGCTGTCGGTAACGATGGTGATGGCTATGTCGATAACAAATTTAAACATCAGGCCATCGCAGTA CTGCAATACAAACGTTTTGCCACCGCCAGAGCCGACCGTATAGCCAGTCAATACCCCCCTATGGAGCAGTTAAGCTTTTT TGAACAAATCGAACTTAACAATCGAGGCTTTGATAATGATTTAATTCAAGACTCACCATTTAGTGATTACCTTATACGTA AACGCCCCACATTCGATGAAGCACCGACAACAGTAGCTGGGTTACAGGTTTTTCTGCGAATCGATGCTAGCTGCGAACAA GAGTGTGAGTGGTTAGCCCTCGCATCAAAGCAGTGGCCTCAAGTATCTCTAATCGGTGAAACAAGTCGCGGCAGCCTTAG CCCCCTGCACCGTTTCACCCTGCCAAACAGTGGGATCAAAATTCAATTTAGCTCGGCTCTGGTCTACGAGACTAACGGTC AGCTACTCTCAGGAGTCGGGATAGACCCGGAACTCCAGCTGCAACAACAGGCCTTTCGAAAGCATAATATTGACGAACTT ATTACCGAGAAATGGTTAGCCAAAACTTCCACGGCCAATATTAATCGCGCCCCCTGA
Upstream 100 bases:
>100_bases GATTAACGACATCTTATAATCGACTAGGTTAGCTCGATATCAAAAGCGTCTTTAGCAGGCTAAAAGTATAAGCTTTCAGC CTGCCTTAACAAGGATGGTT
Downstream 100 bases:
>100_bases GTAACAGGGATTGAGTGAAGTGCGTTTAATCCTGCCAACTCGGCGAATTCGAACATATTTTTCCATGATTCTAAACGAAT TCATTCCATCAATCGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MTLSYKSIFGAFTLVISLSAALLSYQLFFPKQIKTELNHRQYQQDLLMFLEATKQHSAFAAIEPQRLITITETASRLMLE ASGFNHSTLLQQQLQQLLSQLNDPAAIALAHNSTSLEMLPFEPIFDGQNWQAFTPQGRLMEPDFPYLSHIDGIPISRWVQ ASQHYLTNALKHSSVAQATWIKQIGQLRAEIGLRASNESVITLSDGETSVQRSLSLVQHNKLQTKVPVKQDKASTSQAQI FRLPSQVDAETLLSLTHQLTSQQADDHIGSPSSALIIDIREIKQPQQQLTAWLSKHFSHAVGNDGDGYVDNKFKHQAIAV LQYKRFATARADRIASQYPPMEQLSFFEQIELNNRGFDNDLIQDSPFSDYLIRKRPTFDEAPTTVAGLQVFLRIDASCEQ ECEWLALASKQWPQVSLIGETSRGSLSPLHRFTLPNSGIKIQFSSALVYETNGQLLSGVGIDPELQLQQQAFRKHNIDEL ITEKWLAKTSTANINRAP
Sequences:
>Translated_498_residues MTLSYKSIFGAFTLVISLSAALLSYQLFFPKQIKTELNHRQYQQDLLMFLEATKQHSAFAAIEPQRLITITETASRLMLE ASGFNHSTLLQQQLQQLLSQLNDPAAIALAHNSTSLEMLPFEPIFDGQNWQAFTPQGRLMEPDFPYLSHIDGIPISRWVQ ASQHYLTNALKHSSVAQATWIKQIGQLRAEIGLRASNESVITLSDGETSVQRSLSLVQHNKLQTKVPVKQDKASTSQAQI FRLPSQVDAETLLSLTHQLTSQQADDHIGSPSSALIIDIREIKQPQQQLTAWLSKHFSHAVGNDGDGYVDNKFKHQAIAV LQYKRFATARADRIASQYPPMEQLSFFEQIELNNRGFDNDLIQDSPFSDYLIRKRPTFDEAPTTVAGLQVFLRIDASCEQ ECEWLALASKQWPQVSLIGETSRGSLSPLHRFTLPNSGIKIQFSSALVYETNGQLLSGVGIDPELQLQQQAFRKHNIDEL ITEKWLAKTSTANINRAP >Mature_497_residues TLSYKSIFGAFTLVISLSAALLSYQLFFPKQIKTELNHRQYQQDLLMFLEATKQHSAFAAIEPQRLITITETASRLMLEA SGFNHSTLLQQQLQQLLSQLNDPAAIALAHNSTSLEMLPFEPIFDGQNWQAFTPQGRLMEPDFPYLSHIDGIPISRWVQA SQHYLTNALKHSSVAQATWIKQIGQLRAEIGLRASNESVITLSDGETSVQRSLSLVQHNKLQTKVPVKQDKASTSQAQIF RLPSQVDAETLLSLTHQLTSQQADDHIGSPSSALIIDIREIKQPQQQLTAWLSKHFSHAVGNDGDGYVDNKFKHQAIAVL QYKRFATARADRIASQYPPMEQLSFFEQIELNNRGFDNDLIQDSPFSDYLIRKRPTFDEAPTTVAGLQVFLRIDASCEQE CEWLALASKQWPQVSLIGETSRGSLSPLHRFTLPNSGIKIQFSSALVYETNGQLLSGVGIDPELQLQQQAFRKHNIDELI TEKWLAKTSTANINRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55938; Mature: 55807
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSYKSIFGAFTLVISLSAALLSYQLFFPKQIKTELNHRQYQQDLLMFLEATKQHSAFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE AIEPQRLITITETASRLMLEASGFNHSTLLQQQLQQLLSQLNDPAAIALAHNSTSLEMLP EECCCCEEEEEHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEC FEPIFDGQNWQAFTPQGRLMEPDFPYLSHIDGIPISRWVQASQHYLTNALKHSSVAQATW CCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IKQIGQLRAEIGLRASNESVITLSDGETSVQRSLSLVQHNKLQTKVPVKQDKASTSQAQI HHHHHHHHHHHCCEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHE FRLPSQVDAETLLSLTHQLTSQQADDHIGSPSSALIIDIREIKQPQQQLTAWLSKHFSHA EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHH VGNDGDGYVDNKFKHQAIAVLQYKRFATARADRIASQYPPMEQLSFFEQIELNNRGFDND CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC LIQDSPFSDYLIRKRPTFDEAPTTVAGLQVFLRIDASCEQECEWLALASKQWPQVSLIGE CCCCCCCCHHHHCCCCCCCCCCCHHHHHHEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC TSRGSLSPLHRFTLPNSGIKIQFSSALVYETNGQLLSGVGIDPELQLQQQAFRKHNIDEL CCCCCCCCHHHEECCCCCEEEEECCEEEEECCCCEEECCCCCCCHHHHHHHHHHCCHHHH ITEKWLAKTSTANINRAP HHHHHHHHCCCCCCCCCC >Mature Secondary Structure TLSYKSIFGAFTLVISLSAALLSYQLFFPKQIKTELNHRQYQQDLLMFLEATKQHSAFA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE AIEPQRLITITETASRLMLEASGFNHSTLLQQQLQQLLSQLNDPAAIALAHNSTSLEMLP EECCCCEEEEEHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEC FEPIFDGQNWQAFTPQGRLMEPDFPYLSHIDGIPISRWVQASQHYLTNALKHSSVAQATW CCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IKQIGQLRAEIGLRASNESVITLSDGETSVQRSLSLVQHNKLQTKVPVKQDKASTSQAQI HHHHHHHHHHHCCEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHE FRLPSQVDAETLLSLTHQLTSQQADDHIGSPSSALIIDIREIKQPQQQLTAWLSKHFSHA EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHH VGNDGDGYVDNKFKHQAIAVLQYKRFATARADRIASQYPPMEQLSFFEQIELNNRGFDND CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC LIQDSPFSDYLIRKRPTFDEAPTTVAGLQVFLRIDASCEQECEWLALASKQWPQVSLIGE CCCCCCCCHHHHCCCCCCCCCCCHHHHHHEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC TSRGSLSPLHRFTLPNSGIKIQFSSALVYETNGQLLSGVGIDPELQLQQQAFRKHNIDEL CCCCCCCCHHHEECCCCCEEEEECCEEEEECCCCEEECCCCCCCHHHHHHHHHHCCHHHH ITEKWLAKTSTANINRAP HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA