| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960496
Identifier: 157960496
GI number: 157960496
Start: 827407
End: 828267
Strand: Reverse
Name: 157960496
Synonym: Spea_0668
Alternate gene names: NA
Gene position: 828267-827407 (Counterclockwise)
Preceding gene: 157960497
Following gene: 157960489
Centisome position: 16.01
GC content: 50.52
Gene sequence:
>861_bases ATGGTTGAGACAATAGCAGACGCTGCCAAACAGGCAGGCAAACCGACAGCGAAAGACAGCAGCAAGGCCTCGGGCGTATC AGCCCGTAAGAAAGCCTTACTGCTGGGGCGTATGTTAGGTTTAGCCAGTGAAGACGACTATCGCGCCAGCAACGCTTCCA TTAGTGAGCGCGCCGCCTTTAGGGCGCAGAAGTTGGCGTGTCAGTATCAAGAAAACCTTGAAACCATCTACAAGATCGCC ATCAGCCACACGCCGTCTGACGTGACCGGAGTGGACTTAGATCCCGATTGGGCGCACCAGTTTTTTAAGCTGGCCGAGCA AATTCATAACCGTAAAATGCAGGAGTTGTGGGGGCGGATCTTAGCCAATGAGATTACCTCACCGGGCCACTTTAGTCTGC GCACCTTAAGCACGCTCAAGCAACTGACCCATAAAGAGGCGCAAATCTTAGAAAAGGCACTTGGCATGTCGGTGCTGGTC AACAATGAGACCCGCCTCAAGCTGATCATCGGCTTTAAACATGCCGGAGGCTTAGGACAGTTTTTTAAGAAGCCGACTTC GAGCAATATTGGGTTATCTCAGTTTGGCCTGCCCTACTCCAACATTCTCACCTTAGTCGAGGCGGGGATCTTACATCGCA GCGAGTTAGAAACCGGCCTGCTTAGCAATAAAACGCCGATAAGTTTCTCCTTGAGTGATTTGAAACTTAAACTCACCCCT AAGAGCGGTCAGCTATTCTTCAGTTACTACCGCTTTACCCCTATTGGCGACGAGCTAGCACAGCTGATCCCCTTCATTAC CGATAAAGACTATATCAAGGCGATGCGAGCGCTGTTTTCCCGCGACTTTAAGATTGAATAG
Upstream 100 bases:
>100_bases GCAAACTAGGGCTGACTCTATAAATTAGCTGGTTATCAAACAGATAGTCAAACCGGCCAGATAACAACAAGCACCGCTTG TTGATGGTGAATAACAGATC
Downstream 100 bases:
>100_bases TGACAGTAAATCTTAGATATAAAAATGCGATGCCTATGGATTACATAAAGGCATCGCATAATTACTATCCGTCAGAGTAA GTTTCGAGCCCTTCCCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MVETIADAAKQAGKPTAKDSSKASGVSARKKALLLGRMLGLASEDDYRASNASISERAAFRAQKLACQYQENLETIYKIA ISHTPSDVTGVDLDPDWAHQFFKLAEQIHNRKMQELWGRILANEITSPGHFSLRTLSTLKQLTHKEAQILEKALGMSVLV NNETRLKLIIGFKHAGGLGQFFKKPTSSNIGLSQFGLPYSNILTLVEAGILHRSELETGLLSNKTPISFSLSDLKLKLTP KSGQLFFSYYRFTPIGDELAQLIPFITDKDYIKAMRALFSRDFKIE
Sequences:
>Translated_286_residues MVETIADAAKQAGKPTAKDSSKASGVSARKKALLLGRMLGLASEDDYRASNASISERAAFRAQKLACQYQENLETIYKIA ISHTPSDVTGVDLDPDWAHQFFKLAEQIHNRKMQELWGRILANEITSPGHFSLRTLSTLKQLTHKEAQILEKALGMSVLV NNETRLKLIIGFKHAGGLGQFFKKPTSSNIGLSQFGLPYSNILTLVEAGILHRSELETGLLSNKTPISFSLSDLKLKLTP KSGQLFFSYYRFTPIGDELAQLIPFITDKDYIKAMRALFSRDFKIE >Mature_286_residues MVETIADAAKQAGKPTAKDSSKASGVSARKKALLLGRMLGLASEDDYRASNASISERAAFRAQKLACQYQENLETIYKIA ISHTPSDVTGVDLDPDWAHQFFKLAEQIHNRKMQELWGRILANEITSPGHFSLRTLSTLKQLTHKEAQILEKALGMSVLV NNETRLKLIIGFKHAGGLGQFFKKPTSSNIGLSQFGLPYSNILTLVEAGILHRSELETGLLSNKTPISFSLSDLKLKLTP KSGQLFFSYYRFTPIGDELAQLIPFITDKDYIKAMRALFSRDFKIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31794; Mature: 31794
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETIADAAKQAGKPTAKDSSKASGVSARKKALLLGRMLGLASEDDYRASNASISERAAF CCCHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RAQKLACQYQENLETIYKIAISHTPSDVTGVDLDPDWAHQFFKLAEQIHNRKMQELWGRI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LANEITSPGHFSLRTLSTLKQLTHKEAQILEKALGMSVLVNNETRLKLIIGFKHAGGLGQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCHHH FFKKPTSSNIGLSQFGLPYSNILTLVEAGILHRSELETGLLSNKTPISFSLSDLKLKLTP HHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEEC KSGQLFFSYYRFTPIGDELAQLIPFITDKDYIKAMRALFSRDFKIE CCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVETIADAAKQAGKPTAKDSSKASGVSARKKALLLGRMLGLASEDDYRASNASISERAAF CCCHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH RAQKLACQYQENLETIYKIAISHTPSDVTGVDLDPDWAHQFFKLAEQIHNRKMQELWGRI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LANEITSPGHFSLRTLSTLKQLTHKEAQILEKALGMSVLVNNETRLKLIIGFKHAGGLGQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCHHH FFKKPTSSNIGLSQFGLPYSNILTLVEAGILHRSELETGLLSNKTPISFSLSDLKLKLTP HHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEEEC KSGQLFFSYYRFTPIGDELAQLIPFITDKDYIKAMRALFSRDFKIE CCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA