BacMap

Definition	Rickettsia akari str. Hartford, complete genome.
Accession	NC_009881
Length	1,231,060

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The map label for this gene is cbiO1 [H]

Identifier: 157825631

GI number: 157825631

Start: 495976

End: 496719

Strand: Direct

Name: cbiO1 [H]

Synonym: A1C_02740

Alternate gene names: 157825631

Gene position: 495976-496719 (Clockwise)

Preceding gene: 157825630

Following gene: 157825634

Centisome position: 40.29

GC content: 36.42

Gene sequence:

>744_bases
ATGAAACCTTATTTATATGCAGAAAATATAGAGTTCAAAGTGAGAGAAAGAACCGAGTCTATAATTGCTGAAACTACTTT
AAATATTGCTAAAGAAGAGTTTATCGTAATATTAGGTCATAACGGGAGCGGCAAGTCTACTTTAGCTAAAATACTTGCCG
GTTATTTGAAGCCTACTAGTGGGAAAGTATTTTTAGATCAAATCAGAATTGATAAAATACCTAAAGCTCAGAAAGCTCGT
ACGCTGGTTACACTAACACAAAAAGCTGAGGAGAGGCTATTTACCGAGCTAACGCTTGAGGAAAATATTATCATATGGGA
AAGTAGATTCCCTAGTAATGAACGGTTAAGTTTTAGCGAGGTGCTAGAACTGACCGGTGCACCTCAGCGTTTTTTACCAT
TACTTTCACAGCCGCTTGGTAAATTTTCGGGCGGAGAAAAGCAGATTATATTGCTGGCATTTAGCATAGTTCATCCGCCT
AAAATATTATTTCTAGACGAGCATACAGCAAATTTAGATCCGAAAGCTTCTTTGGAAGTGATGAAAAAAACAGCAGAGAT
TATAGAACAACATAAGATAACTTCCGTGATGATCACGCATAATTTGGAAGATGCCGTAAATTACGGCAAAAGGCTTATAG
TACTTGATAGTGGTAAGGTAGTACTAGACTACCTAAAACCACCGGGTTTTTCTTTAAAAGAACTTAGAGAGATTTTACAA
TTCAATATTAATATCGACGGCTAA

Upstream 100 bases:

>100_bases
GTCATTGTTGTGTACGACTCCATGTGTTGTTGCATTATTGATGTCATTCCAGCGTAGGCGGGAATGACATCAATATAAAA
ACGCTTTAAAAGACAAAATT

Downstream 100 bases:

>100_bases
ATTAGTGCCAAATTACATTTGAGACCTTTTTGATAACCATTGCTTCAAATGCAATTATGTCATCAACATTACCGTTGATA
ATTTTAACAGCAATAATTTC

Product: putative ABC transporter ATP-binding protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKPYLYAENIEFKVRERTESIIAETTLNIAKEEFIVILGHNGSGKSTLAKILAGYLKPTSGKVFLDQIRIDKIPKAQKAR
TLVTLTQKAEERLFTELTLEENIIIWESRFPSNERLSFSEVLELTGAPQRFLPLLSQPLGKFSGGEKQIILLAFSIVHPP
KILFLDEHTANLDPKASLEVMKKTAEIIEQHKITSVMITHNLEDAVNYGKRLIVLDSGKVVLDYLKPPGFSLKELREILQ
FNINIDG

Sequences:

>Translated_247_residues
MKPYLYAENIEFKVRERTESIIAETTLNIAKEEFIVILGHNGSGKSTLAKILAGYLKPTSGKVFLDQIRIDKIPKAQKAR
TLVTLTQKAEERLFTELTLEENIIIWESRFPSNERLSFSEVLELTGAPQRFLPLLSQPLGKFSGGEKQIILLAFSIVHPP
KILFLDEHTANLDPKASLEVMKKTAEIIEQHKITSVMITHNLEDAVNYGKRLIVLDSGKVVLDYLKPPGFSLKELREILQ
FNINIDG
>Mature_247_residues
MKPYLYAENIEFKVRERTESIIAETTLNIAKEEFIVILGHNGSGKSTLAKILAGYLKPTSGKVFLDQIRIDKIPKAQKAR
TLVTLTQKAEERLFTELTLEENIIIWESRFPSNERLSFSEVLELTGAPQRFLPLLSQPLGKFSGGEKQIILLAFSIVHPP
KILFLDEHTANLDPKASLEVMKKTAEIIEQHKITSVMITHNLEDAVNYGKRLIVLDSGKVVLDYLKPPGFSLKELREILQ
FNINIDG

Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]

COG id: COG1101

COG function: function code R; ABC-type uncharacterized transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9665248, Length=219, Percent_Identity=25.5707762557078, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI27262624, Length=198, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI27262626, Length=198, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI89111135, Length=226, Percent_Identity=28.3185840707965, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI42490749, Length=218, Percent_Identity=25.6880733944954, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI153792144, Length=221, Percent_Identity=25.3393665158371, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI42741659, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI45446740, Length=208, Percent_Identity=30.2884615384615, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI47078218, Length=208, Percent_Identity=30.2884615384615, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9955966, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI45243524, Length=219, Percent_Identity=25.5707762557078, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI116734710, Length=218, Percent_Identity=24.3119266055046, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI66529005, Length=223, Percent_Identity=28.2511210762332, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI171184400, Length=221, Percent_Identity=28.0542986425339, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI157502201, Length=225, Percent_Identity=27.5555555555556, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI27881501, Length=215, Percent_Identity=23.2558139534884, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI21536376, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI30795238, Length=215, Percent_Identity=23.2558139534884, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87081791, Length=206, Percent_Identity=30.5825242718447, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1786253, Length=206, Percent_Identity=28.1553398058252, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082267, Length=205, Percent_Identity=27.8048780487805, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786345, Length=220, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790467, Length=206, Percent_Identity=30.0970873786408, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789864, Length=212, Percent_Identity=27.8301886792453, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=27.9620853080569, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=26.2910798122066, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082268, Length=206, Percent_Identity=29.6116504854369, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787164, Length=222, Percent_Identity=27.027027027027, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787029, Length=213, Percent_Identity=30.5164319248826, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786803, Length=205, Percent_Identity=27.3170731707317, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787370, Length=209, Percent_Identity=27.7511961722488, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081782, Length=200, Percent_Identity=31.5, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787112, Length=220, Percent_Identity=26.8181818181818, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786654, Length=223, Percent_Identity=28.6995515695067, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786698, Length=213, Percent_Identity=27.6995305164319, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=219, Percent_Identity=25.5707762557078, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790739, Length=224, Percent_Identity=29.9107142857143, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789672, Length=209, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=28.3653846153846, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790544, Length=217, Percent_Identity=26.2672811059908, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=27.6381909547739, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=25.2212389380531, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788897, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786872, Length=202, Percent_Identity=29.2079207920792, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI48994943, Length=238, Percent_Identity=27.7310924369748, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787547, Length=220, Percent_Identity=25.9090909090909, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=25, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=26.7605633802817, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790190, Length=224, Percent_Identity=24.5535714285714, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788450, Length=210, Percent_Identity=25.2380952380952, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786703, Length=207, Percent_Identity=28.5024154589372, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48994997, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI48995001, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788053, Length=208, Percent_Identity=25.4807692307692, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787548, Length=232, Percent_Identity=23.7068965517241, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786398, Length=215, Percent_Identity=24.1860465116279, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=225, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193211017, Length=225, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193211015, Length=225, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193208177, Length=224, Percent_Identity=26.7857142857143, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI115534520, Length=220, Percent_Identity=24.0909090909091, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=222, Percent_Identity=26.1261261261261, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=232, Percent_Identity=26.2931034482759, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=221, Percent_Identity=26.6968325791855, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=222, Percent_Identity=29.2792792792793, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=219, Percent_Identity=28.310502283105, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=209, Percent_Identity=25.3588516746411, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=224, Percent_Identity=24.5535714285714, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=221, Percent_Identity=26.2443438914027, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=26.1061946902655, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=194, Percent_Identity=26.8041237113402, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=218, Percent_Identity=26.1467889908257, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=221, Percent_Identity=29.8642533936652, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=211, Percent_Identity=25.5924170616114, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=224, Percent_Identity=27.2321428571429, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=216, Percent_Identity=26.8518518518519, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193209740, Length=235, Percent_Identity=26.8085106382979, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=212, Percent_Identity=24.0566037735849, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=212, Percent_Identity=24.0566037735849, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=219, Percent_Identity=23.7442922374429, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=219, Percent_Identity=26.4840182648402, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322980, Length=226, Percent_Identity=25.2212389380531, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323959, Length=246, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320339, Length=223, Percent_Identity=27.8026905829596, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221474134, Length=224, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24666092, Length=206, Percent_Identity=26.6990291262136, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI17136662, Length=224, Percent_Identity=28.125, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641565, Length=221, Percent_Identity=26.6968325791855, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281363262, Length=231, Percent_Identity=30.3030303030303, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24653245, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397593, Length=224, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643674, Length=216, Percent_Identity=24.0740740740741, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24649703, Length=185, Percent_Identity=30.8108108108108, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015856
- InterPro:   IPR003593
- InterPro:   IPR022112 [H]

Pfam domain/function: PF00005 ABC_tran; PF12370 CoABC_C [H]

EC number: NA

Molecular weight: Translated: 27911; Mature: 27911

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYLYAENIEFKVRERTESIIAETTLNIAKEEFIVILGHNGSGKSTLAKILAGYLKPTS
CCCCEEECCCEEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCC
GKVFLDQIRIDKIPKAQKARTLVTLTQKAEERLFTELTLEENIIIWESRFPSNERLSFSE
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHH
VLELTGAPQRFLPLLSQPLGKFSGGEKQIILLAFSIVHPPKILFLDEHTANLDPKASLEV
HHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHH
MKKTAEIIEQHKITSVMITHNLEDAVNYGKRLIVLDSGKVVLDYLKPPGFSLKELREILQ
HHHHHHHHHHHHHEEEEEECCHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHH
FNINIDG
HCCCCCC
>Mature Secondary Structure
MKPYLYAENIEFKVRERTESIIAETTLNIAKEEFIVILGHNGSGKSTLAKILAGYLKPTS
CCCCEEECCCEEEEHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCC
GKVFLDQIRIDKIPKAQKARTLVTLTQKAEERLFTELTLEENIIIWESRFPSNERLSFSE
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHH
VLELTGAPQRFLPLLSQPLGKFSGGEKQIILLAFSIVHPPKILFLDEHTANLDPKASLEV
HHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHH
MKKTAEIIEQHKITSVMITHNLEDAVNYGKRLIVLDSGKVVLDYLKPPGFSLKELREILQ
HHHHHHHHHHHHHEEEEEECCHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHH
FNINIDG
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]