Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

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The map label for this gene is 157825630

Identifier: 157825630

GI number: 157825630

Start: 495026

End: 495859

Strand: Direct

Name: 157825630

Synonym: A1C_02735

Alternate gene names: NA

Gene position: 495026-495859 (Clockwise)

Preceding gene: 157825629

Following gene: 157825631

Centisome position: 40.21

GC content: 34.53

Gene sequence:

>834_bases
ATGAACATTTTAGTTACTGCTCTTGAGCAATCCTTAATAATGCTGCCGCTTATTTTAGGAATGTATATAAGTTATCGTAT
TCTAACACTTACCGATCTTACCGTAGACGGTACTTATGTACTAGGAGCTGCTGTATTTGCCCGCACTATTTCATTGGGGT
TATTTCCTGCATTAATATTTGCCGTAATATCAGGAGGAATTATCGGCAGCATAGTGAGTTTTATGCAGAAAAATAACCGC
ATTAACGGGCTGATATCTGGAATACTTGCAAATTTTATGCTTTATTCCATGAACTTACAAATTATGCAGCGTCCTAATAT
ATCGGTTCTCGGTATGCCAACTCTGTTATCTATATTAGATCTTGATAATTGGTTAATACCTTTAATAACAATTAATTGTC
TTATTATATCTGCTGTTATAATTTTATTGAAAGGTAAGCTTGGTTTATTTCTTCGTGCTTTTGGTTTTAATAAAGATTTA
TTGATTAACTTAGGAAAACCTGCCGAGCTTTATCGCATGCTTGGGCTTAGTATAAGCAACTGCCTAGCTGCTTTAACTGG
CACTTTATCGGCACAAATAAACGGTTTTGCCGATATTAATATGGGTTTTGGGGTGGCGCTAGTTGGTATCGGTGCAATTG
TTATAGGGCGGCATATTTTAATCAATGCTAATAATTTCAATGCATTTAAAGAGATATTTTCTTGTTTTGTAGGTATATTA
TTTTACTTTATTGCTCTGAGCCTTTTACTCCAAATTGGCATCGATCCTATAAACCTTAAGCTTATTTTAGGGATAGTATT
GTTTATTTCGCTCAGTACTGTGAGTAAGCAGTAA

Upstream 100 bases:

>100_bases
TTATTTATTAACCTTAAATCATTTGTTAAACAAGATATTCTGACTAAGGAAAATTTATCCGTACTTCCTTTGACTAAAAA
AGAACTTACAGAGTAGTAAC

Downstream 100 bases:

>100_bases
TTGTGTGGATACTAGAGTCATTGTTGTGTACGACTCCATGTGTTGTTGCATTATTGATGTCATTCCAGCGTAGGCGGGAA
TGACATCAATATAAAAACGC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNILVTALEQSLIMLPLILGMYISYRILTLTDLTVDGTYVLGAAVFARTISLGLFPALIFAVISGGIIGSIVSFMQKNNR
INGLISGILANFMLYSMNLQIMQRPNISVLGMPTLLSILDLDNWLIPLITINCLIISAVIILLKGKLGLFLRAFGFNKDL
LINLGKPAELYRMLGLSISNCLAALTGTLSAQINGFADINMGFGVALVGIGAIVIGRHILINANNFNAFKEIFSCFVGIL
FYFIALSLLLQIGIDPINLKLILGIVLFISLSTVSKQ

Sequences:

>Translated_277_residues
MNILVTALEQSLIMLPLILGMYISYRILTLTDLTVDGTYVLGAAVFARTISLGLFPALIFAVISGGIIGSIVSFMQKNNR
INGLISGILANFMLYSMNLQIMQRPNISVLGMPTLLSILDLDNWLIPLITINCLIISAVIILLKGKLGLFLRAFGFNKDL
LINLGKPAELYRMLGLSISNCLAALTGTLSAQINGFADINMGFGVALVGIGAIVIGRHILINANNFNAFKEIFSCFVGIL
FYFIALSLLLQIGIDPINLKLILGIVLFISLSTVSKQ
>Mature_277_residues
MNILVTALEQSLIMLPLILGMYISYRILTLTDLTVDGTYVLGAAVFARTISLGLFPALIFAVISGGIIGSIVSFMQKNNR
INGLISGILANFMLYSMNLQIMQRPNISVLGMPTLLSILDLDNWLIPLITINCLIISAVIILLKGKLGLFLRAFGFNKDL
LINLGKPAELYRMLGLSISNCLAALTGTLSAQINGFADINMGFGVALVGIGAIVIGRHILINANNFNAFKEIFSCFVGIL
FYFIALSLLLQIGIDPINLKLILGIVLFISLSTVSKQ

Specific function: Unknown

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 29956; Mature: 29956

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILVTALEQSLIMLPLILGMYISYRILTLTDLTVDGTYVLGAAVFARTISLGLFPALIF
CCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
AVISGGIIGSIVSFMQKNNRINGLISGILANFMLYSMNLQIMQRPNISVLGMPTLLSILD
HHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHEEECCCCEEECHHHHHHHHH
LDNWLIPLITINCLIISAVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRMLGLSISN
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCHHH
CLAALTGTLSAQINGFADINMGFGVALVGIGAIVIGRHILINANNFNAFKEIFSCFVGIL
HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH
FYFIALSLLLQIGIDPINLKLILGIVLFISLSTVSKQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILVTALEQSLIMLPLILGMYISYRILTLTDLTVDGTYVLGAAVFARTISLGLFPALIF
CCEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
AVISGGIIGSIVSFMQKNNRINGLISGILANFMLYSMNLQIMQRPNISVLGMPTLLSILD
HHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHEEECCCCEEECHHHHHHHHH
LDNWLIPLITINCLIISAVIILLKGKLGLFLRAFGFNKDLLINLGKPAELYRMLGLSISN
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCHHH
CLAALTGTLSAQINGFADINMGFGVALVGIGAIVIGRHILINANNFNAFKEIFSCFVGIL
HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH
FYFIALSLLLQIGIDPINLKLILGIVLFISLSTVSKQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]