Click here to switch to the map view.

The map label for this gene is chaB [H]

Identifier: 157825370

GI number: 157825370

Start: 249082

End: 249276

Strand: Reverse

Name: chaB [H]

Synonym: A1C_01320

Alternate gene names: 157825370

Gene position: 249276-249082 (Counterclockwise)

Preceding gene: 157825371

Following gene: 157825369

Centisome position: 20.25

GC content: 32.82

Gene sequence:

>195_bases
ATGCCTTATAACAATAATAACGATTTACCTAATTCAGTTAAAAATCATCTTCCAAGTCATGCTAAGGATATTTATCGCGA
AGCTTTTAATCATGCATTTGCACAATATAAGGATGCCGATAAAAAACGTGGAAATGGCTCTAAAGAGGCAGTTGCTCATA
AATTAGCATGGTCAACCGTAGAAAAAATATCATAA

Upstream 100 bases:

>100_bases
AAACAATCGCACAGATTCGGGTACCGGATTGATGTATAAATTACCTTTAGAAGGATGTTACGCAAGAAGTCTATTTGCAT
AATATGATCCGTAGGTCTCT

Downstream 100 bases:

>100_bases
AAATGATAAAGAACACTGGGTAGAAAAATAAGTCCAAGAATATAGACCTATTCCTTCTAGTGGTAATTTGTATGTCAATG
CAGTACTCGAATCCTTGCGT

Product: cation transport regulator ChaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPYNNNNDLPNSVKNHLPSHAKDIYREAFNHAFAQYKDADKKRGNGSKEAVAHKLAWSTVEKIS

Sequences:

>Translated_64_residues
MPYNNNNDLPNSVKNHLPSHAKDIYREAFNHAFAQYKDADKKRGNGSKEAVAHKLAWSTVEKIS
>Mature_63_residues
PYNNNNDLPNSVKNHLPSHAKDIYREAFNHAFAQYKDADKKRGNGSKEAVAHKLAWSTVEKIS

Specific function: Unknown

COG id: COG4572

COG function: function code R; Putative cation transport regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787469, Length=60, Percent_Identity=58.3333333333333, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009317 [H]

Pfam domain/function: PF06150 ChaB [H]

EC number: NA

Molecular weight: Translated: 7268; Mature: 7137

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYNNNNDLPNSVKNHLPSHAKDIYREAFNHAFAQYKDADKKRGNGSKEAVAHKLAWSTV
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EKIS
HHCC
>Mature Secondary Structure 
PYNNNNDLPNSVKNHLPSHAKDIYREAFNHAFAQYKDADKKRGNGSKEAVAHKLAWSTV
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EKIS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]