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The map label for this gene is yfiO [C]

Identifier: 157825369

GI number: 157825369

Start: 248071

End: 248814

Strand: Reverse

Name: yfiO [C]

Synonym: A1C_01315

Alternate gene names: 157825369

Gene position: 248814-248071 (Counterclockwise)

Preceding gene: 157825370

Following gene: 157825368

Centisome position: 20.21

GC content: 35.22

Gene sequence:

>744_bases
ATGAAATTAACAAAATTATTGAGTACTCTTTTGGTTATAGGATTAGTTTTTAGCGGGTGTAAAAGCAAAAAAACCAGTGA
TGACATAGTAGTTCCTATTCCAACTCTTTATAACGAAGGTGTTACTTTGTTAGCAAAGCAAAAATATAAGAAAGCTGCGG
AAGAATTCGGAAGAGTATTTTACCAGCATCCAGGTAATGCAATGACGCCGCAAGCCGAATTGATGCAGGCTTATTCTTTG
TTCCTTGCCGCTCAATATGAAGAAGCGGTTGATGTACTTGAGATGTTCATTAATTTGCACCCTGCAAATGTTGACATTGC
TTATGCGTATTACCTTAAAGCATTATCATATTATATGTTAGTTTCAGACGTAAATCATGATCAATCTAGAACTTCCTTAG
CTAAAGATAGTTTTGAAGACGTAATAGCGAGATTCCCAAATACTAAATATGCTATTGATTCATCTTTAAAAATCGACCTA
GTAAACGATCATTTAGCAGGTAAAGAGATGATGGTAGGTCGGTTTTACTTAAAGAAACAGAACCCAATGGCAGCTATTAA
TAGATTTGAAGAGGTAATTGATAATTATCAAACTACTTCTCACTCAGTAGAAGCTCTTTACCGTTTAGTCGAAATCTATA
TGATGCTTGGGTTACCTGATGAAGCACAAAAATATGCCTCGGTGCTAGGTTATAACTATCCTGATAGTCCGTGGTATAGT
TATGCATATAAGTTGGTTAAGTAG

Upstream 100 bases:

>100_bases
TGAATAGATCTAATTTATAAGTTAGTAAGATTTTAAATTGAATCCTTGAAATTCTTTAAGCCTATATGTATATTTAGTTA
TTAACTGAATTTAAGTTCTT

Downstream 100 bases:

>100_bases
TGAGATATTCATAGTGCTTAAAACCCACTAGATGTCATCCCGTGGCTTGACAACGTGATCCATAAAAACAACTTGAAAAT
ACTAATAACTTAGTATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKLTKLLSTLLVIGLVFSGCKSKKTSDDIVVPIPTLYNEGVTLLAKQKYKKAAEEFGRVFYQHPGNAMTPQAELMQAYSL
FLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVNHDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDL
VNDHLAGKEMMVGRFYLKKQNPMAAINRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYS
YAYKLVK

Sequences:

>Translated_247_residues
MKLTKLLSTLLVIGLVFSGCKSKKTSDDIVVPIPTLYNEGVTLLAKQKYKKAAEEFGRVFYQHPGNAMTPQAELMQAYSL
FLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVNHDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDL
VNDHLAGKEMMVGRFYLKKQNPMAAINRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYS
YAYKLVK
>Mature_247_residues
MKLTKLLSTLLVIGLVFSGCKSKKTSDDIVVPIPTLYNEGVTLLAKQKYKKAAEEFGRVFYQHPGNAMTPQAELMQAYSL
FLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYMLVSDVNHDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDL
VNDHLAGKEMMVGRFYLKKQNPMAAINRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYS
YAYKLVK

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=244, Percent_Identity=22.1311475409836, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28164; Mature: 28164

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKLLSTLLVIGLVFSGCKSKKTSDDIVVPIPTLYNEGVTLLAKQKYKKAAEEFGRVF
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHH
YQHPGNAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYML
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VSDVNHDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQ
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCC
NPMAAINRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH
YAYKLVK
HHHHHCC
>Mature Secondary Structure
MKLTKLLSTLLVIGLVFSGCKSKKTSDDIVVPIPTLYNEGVTLLAKQKYKKAAEEFGRVF
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHH
YQHPGNAMTPQAELMQAYSLFLAAQYEEAVDVLEMFINLHPANVDIAYAYYLKALSYYML
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VSDVNHDQSRTSLAKDSFEDVIARFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKQ
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCC
NPMAAINRFEEVIDNYQTTSHSVEALYRLVEIYMMLGLPDEAQKYASVLGYNYPDSPWYS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH
YAYKLVK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]