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The map label for this gene is oxyR [H]

Identifier: 157373007

GI number: 157373007

Start: 5289373

End: 5290290

Strand: Reverse

Name: oxyR [H]

Synonym: Spro_4775

Alternate gene names: 157373007

Gene position: 5290290-5289373 (Counterclockwise)

Preceding gene: 157373010

Following gene: 157373005

Centisome position: 97.09

GC content: 58.39

Gene sequence:

>918_bases
ATGAATATTCGTGATTTAGAGTACCTGGTCGCCTTGGCCGAGCACCGGCATTTCCGCCGTGCCGCCGATTCATGCCATGT
TAGCCAACCCACGCTCAGTGGGCAGATCCGCAAGCTGGAAGACGAACTGGGTGTGATGTTGCTCGAGCGCACCAGCCGCA
AGGTGTTATTTACCCAGGCGGGCCTGTTGCTGGTGGAGCAGGCGCGTACCGTGCTGCGCGAAGTCAAAGTTCTGAAAGAG
ATGGCCAGCCAGCAGGGCGAAGCCATGTCCGGGCCGTTGCATATCGGCCTGATCCCGACCGTCGGGCCTTATTTGCTGCC
GCAGATCATCCCTACGCTGCACAAAACCTTCCCCAAGCTGGAAATGTACCTGCATGAGGCGCAAACCCAACAGCTGCTGG
CGCAACTCGACAGCGGTAAACTGGACTGTGCGATCCTGGCGTTGGTGAAGGAAACCGAAGCCTTTATCGAAGTGCCGTTG
TTTGATGAGCCAATGAAGCTGGCGGTGTACTCCGATCACCCATGGTCGCAGCGTGACCGTGTGGCGATGCCGGACTTGGC
AGGGGAAAAACTGCTGATGCTGGAAGATGGGCACTGCTTGCGCGATCAGGCAATGGGCTTTTGCTTCCAGGCCGGTGCCG
ACGAGGATACCCATTTCCGGGCGACCAGCCTGGAAACGCTGCGCAATATGGTTGCGGCGGGCAGTGGTATTACGCTGTTG
CCTTCATTGGCGGTGCCGCCACAGCGTGAGCGTGACGGCGTGTGTTATCTCGACTGTTATAAACCCGAACCCAAGCGCAC
CATTGCGCTGGTGTACCGCCCCGGCTCCCCATTGCGCAGTCGTTATGAGCAATTGGCCGAGGCGATCCGCGAGCACATGC
AAAACTACCTGGGTACCACGCTAAAACAGGCGGTTTAA

Upstream 100 bases:

>100_bases
GCTTTGATGGGACACATTATTGCCGCCGGGGGTTGATAGATCTAATCGCTCATTGCTATCTTATCTATCGCCATGAGCTA
TCGTGGTCTGGAGGGAAACA

Downstream 100 bases:

>100_bases
GCCGTTCAGCGCTGCCACCCGGTAGGCTTCGGCCATGGTCGGATAGTTGAAGGTAGTATTAACGAAATACTCGATAGTAT
TGCCTTCACCTTTCTGTTCC

Product: DNA-binding transcriptional regulator OxyR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLLLVEQARTVLREVKVLKE
MASQQGEAMSGPLHIGLIPTVGPYLLPQIIPTLHKTFPKLEMYLHEAQTQQLLAQLDSGKLDCAILALVKETEAFIEVPL
FDEPMKLAVYSDHPWSQRDRVAMPDLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL
PSLAVPPQRERDGVCYLDCYKPEPKRTIALVYRPGSPLRSRYEQLAEAIREHMQNYLGTTLKQAV

Sequences:

>Translated_305_residues
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLLLVEQARTVLREVKVLKE
MASQQGEAMSGPLHIGLIPTVGPYLLPQIIPTLHKTFPKLEMYLHEAQTQQLLAQLDSGKLDCAILALVKETEAFIEVPL
FDEPMKLAVYSDHPWSQRDRVAMPDLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL
PSLAVPPQRERDGVCYLDCYKPEPKRTIALVYRPGSPLRSRYEQLAEAIREHMQNYLGTTLKQAV
>Mature_305_residues
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGLLLVEQARTVLREVKVLKE
MASQQGEAMSGPLHIGLIPTVGPYLLPQIIPTLHKTFPKLEMYLHEAQTQQLLAQLDSGKLDCAILALVKETEAFIEVPL
FDEPMKLAVYSDHPWSQRDRVAMPDLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL
PSLAVPPQRERDGVCYLDCYKPEPKRTIALVYRPGSPLRSRYEQLAEAIREHMQNYLGTTLKQAV

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=305, Percent_Identity=88.1967213114754, Blast_Score=552, Evalue=1e-159,
Organism=Escherichia coli, GI157672245, Length=273, Percent_Identity=30.7692307692308, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787530, Length=296, Percent_Identity=25.3378378378378, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787879, Length=248, Percent_Identity=29.8387096774194, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI145693105, Length=288, Percent_Identity=27.4305555555556, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788887, Length=251, Percent_Identity=30.6772908366534, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1788748, Length=292, Percent_Identity=26.3698630136986, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790208, Length=262, Percent_Identity=29.0076335877863, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788297, Length=254, Percent_Identity=28.740157480315, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI2367136, Length=240, Percent_Identity=27.0833333333333, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788296, Length=243, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790262, Length=249, Percent_Identity=28.5140562248996, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787601, Length=145, Percent_Identity=28.2758620689655, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789506, Length=225, Percent_Identity=24.4444444444444, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786401, Length=313, Percent_Identity=24.9201277955272, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788626, Length=292, Percent_Identity=24.6575342465753, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI48994962, Length=265, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI145693193, Length=309, Percent_Identity=25.8899676375405, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081904, Length=182, Percent_Identity=25.8241758241758, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34299; Mature: 34299

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHH
GLLLVEQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTVGPYLLPQIIPTLHKTFPKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
EMYLHEAQTQQLLAQLDSGKLDCAILALVKETEAFIEVPLFDEPMKLAVYSDHPWSQRDR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCC
VAMPDLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL
CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEC
PSLAVPPQRERDGVCYLDCYKPEPKRTIALVYRPGSPLRSRYEQLAEAIREHMQNYLGTT
CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKQAV
HHHCC
>Mature Secondary Structure
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHH
GLLLVEQARTVLREVKVLKEMASQQGEAMSGPLHIGLIPTVGPYLLPQIIPTLHKTFPKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
EMYLHEAQTQQLLAQLDSGKLDCAILALVKETEAFIEVPLFDEPMKLAVYSDHPWSQRDR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCC
VAMPDLAGEKLLMLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITLL
CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEC
PSLAVPPQRERDGVCYLDCYKPEPKRTIALVYRPGSPLRSRYEQLAEAIREHMQNYLGTT
CCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKQAV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA