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The map label for this gene is ydfJ [H]

Identifier: 157372698

GI number: 157372698

Start: 4937543

End: 4938925

Strand: Direct

Name: ydfJ [H]

Synonym: Spro_4465

Alternate gene names: 157372698

Gene position: 4937543-4938925 (Clockwise)

Preceding gene: 157372695

Following gene: 157372699

Centisome position: 90.62

GC content: 60.52

Gene sequence:

>1383_bases
ATGAGCGAAACAACGCTTGCAACCCCACAGGCCACCGACGAAACCTTGGCGGCCGATGAACGTTTGACCACCAAAGAAGG
GCGCGGCCAATTCTGGCGCGCCACTTTCTCGTGCTGGCTTGGCACGGCAATGGAATATGTCGATTTTGCCCTGTATGGCC
TGGCGGCCGGCATGGTGTTCGGCGACGTGTTCTTCCCAGAAGCCACCCCAATGGTGGCGTTGTTGGCCAGCTTCGCCACC
TACTCCGTCGGTTTTATTGCCCGACCTATCGGCGCGTTGATTTTCGGCTGGATTGGCGACCGTAAGGGCCGCCGCGTAGT
GCTGCTCACCACGGTAGCGTTGATGGGCGTCTCTACCACCTTGATCGGGCTGATCCCTTCTTACGCCCAAATCGGCGTCT
GGGCCCCCACCTGCCTGGTGATCCTGCGTTTTGCCCAGGGCTTCGGTGCCGGGGCCGAGCTGTCCGGGGGCGCGGTGATG
CTGGCAGAATATGCACCGGCCAAACGCCGTGGCCTGGTCGCTTCAATCATTGCGATCGGTTCCAACAGCGGTACTCTGTT
AGCCTCGCTGGTCTGGTTGCTGGTGTTGCAATTGGACAAGGCCGATCTGATCGCCTGGGGCTGGCGCATCCCGTTCCTCG
CCAGCATCCTGATCGCCGGGGGCGCTCTCTACCTGCGCCGTCACGTGCGTGAAACCCCGGTATTTGAACGCGAACTGCAA
CAAAACCGTCAGCGCATGCTGGACAACGCTCCCGTGGCAGCGGATAACCGCAGCTACCTGCAGCGCACCAAAGCCTTCTG
GATCATGCTCGGCCTGCGTATTGGTGAGAATGGCCCGTCCTATCTGTGCCAGGGTTTTATCGTCGGTTATGTGGCCAAGG
TGCTGATGGTGGATAAATCGGTGCCGGCGCTGGCGGTGATGATCGCCTCGCTGTGCGGTTTCCTGGTGATTCCGCTGGCG
GGTTGGCTTTCTGACCGCTTCGGCCGCCGCGTCACTTACCGCTGGTTCTGCCTGTTGCTGGTGCTGTACGCCTTCCCGGC
CTTCTGGCTGCTCGACAGCCGTGAGCCGGCGATAGTGATTTCGGTGATTGTGGTCGGCATGTGCATCGCATCTTTGGGCA
TTTTTGGCGTGCAGGCGGCCTATGGAGTGGAACTGTTCGGCGTCAAAAACCGCTACTCAAAAATGGCTTTCGCCAAGGAA
CTGGGGTCGATCCTCTCCGGCGGGACCGCACCGCTGATCGCTACCGCGCTGCTGGCCGGTTTCGGTCACTGGTGGCCTGT
TGCCTGCTATTTTGTTGTAATGGCAGGCATTGGCTTAATCACCACCTTCTTTGCACCGGAAACCCGCGGCCGCGACCTTA
ACCTGCCGCAGGACGCGGTGTAA

Upstream 100 bases:

>100_bases
CAAAACTTTGTTAGCAAACCTTCTTGCCGACACCAGGGAAACCATCTTTACCGCGTTCACGCTACAGGTGTGGCGCAGAC
GAAAAGAGGATATCAATGCC

Downstream 100 bases:

>100_bases
TCAGGGCGTACAGGAATCCAACTTGGATAATCAATCCGCGCGGCGTATCACCCGCGCCGACGTCGCCCGCGTAGCGGGCA
CCTCGGTCGCGGTAGTCAGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSETTLATPQATDETLAADERLTTKEGRGQFWRATFSCWLGTAMEYVDFALYGLAAGMVFGDVFFPEATPMVALLASFAT
YSVGFIARPIGALIFGWIGDRKGRRVVLLTTVALMGVSTTLIGLIPSYAQIGVWAPTCLVILRFAQGFGAGAELSGGAVM
LAEYAPAKRRGLVASIIAIGSNSGTLLASLVWLLVLQLDKADLIAWGWRIPFLASILIAGGALYLRRHVRETPVFERELQ
QNRQRMLDNAPVAADNRSYLQRTKAFWIMLGLRIGENGPSYLCQGFIVGYVAKVLMVDKSVPALAVMIASLCGFLVIPLA
GWLSDRFGRRVTYRWFCLLLVLYAFPAFWLLDSREPAIVISVIVVGMCIASLGIFGVQAAYGVELFGVKNRYSKMAFAKE
LGSILSGGTAPLIATALLAGFGHWWPVACYFVVMAGIGLITTFFAPETRGRDLNLPQDAV

Sequences:

>Translated_460_residues
MSETTLATPQATDETLAADERLTTKEGRGQFWRATFSCWLGTAMEYVDFALYGLAAGMVFGDVFFPEATPMVALLASFAT
YSVGFIARPIGALIFGWIGDRKGRRVVLLTTVALMGVSTTLIGLIPSYAQIGVWAPTCLVILRFAQGFGAGAELSGGAVM
LAEYAPAKRRGLVASIIAIGSNSGTLLASLVWLLVLQLDKADLIAWGWRIPFLASILIAGGALYLRRHVRETPVFERELQ
QNRQRMLDNAPVAADNRSYLQRTKAFWIMLGLRIGENGPSYLCQGFIVGYVAKVLMVDKSVPALAVMIASLCGFLVIPLA
GWLSDRFGRRVTYRWFCLLLVLYAFPAFWLLDSREPAIVISVIVVGMCIASLGIFGVQAAYGVELFGVKNRYSKMAFAKE
LGSILSGGTAPLIATALLAGFGHWWPVACYFVVMAGIGLITTFFAPETRGRDLNLPQDAV
>Mature_459_residues
SETTLATPQATDETLAADERLTTKEGRGQFWRATFSCWLGTAMEYVDFALYGLAAGMVFGDVFFPEATPMVALLASFATY
SVGFIARPIGALIFGWIGDRKGRRVVLLTTVALMGVSTTLIGLIPSYAQIGVWAPTCLVILRFAQGFGAGAELSGGAVML
AEYAPAKRRGLVASIIAIGSNSGTLLASLVWLLVLQLDKADLIAWGWRIPFLASILIAGGALYLRRHVRETPVFERELQQ
NRQRMLDNAPVAADNRSYLQRTKAFWIMLGLRIGENGPSYLCQGFIVGYVAKVLMVDKSVPALAVMIASLCGFLVIPLAG
WLSDRFGRRVTYRWFCLLLVLYAFPAFWLLDSREPAIVISVIVVGMCIASLGIFGVQAAYGVELFGVKNRYSKMAFAKEL
GSILSGGTAPLIATALLAGFGHWWPVACYFVVMAGIGLITTFFAPETRGRDLNLPQDAV

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790550, Length=442, Percent_Identity=36.1990950226244, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1788292, Length=419, Percent_Identity=34.8448687350835, Blast_Score=239, Evalue=3e-64,
Organism=Escherichia coli, GI1789941, Length=459, Percent_Identity=32.8976034858388, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=29.7560975609756, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI87082231, Length=221, Percent_Identity=29.8642533936652, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87082404, Length=390, Percent_Identity=21.5384615384615, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 49915; Mature: 49784

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETTLATPQATDETLAADERLTTKEGRGQFWRATFSCWLGTAMEYVDFALYGLAAGMVF
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDVFFPEATPMVALLASFATYSVGFIARPIGALIFGWIGDRKGRRVVLLTTVALMGVSTT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
LIGLIPSYAQIGVWAPTCLVILRFAQGFGAGAELSGGAVMLAEYAPAKRRGLVASIIAIG
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHCHHHHHHEEC
SNSGTLLASLVWLLVLQLDKADLIAWGWRIPFLASILIAGGALYLRRHVRETPVFERELQ
CCCCHHHHHHHHHHHHHCCCCHHEEECCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHH
QNRQRMLDNAPVAADNRSYLQRTKAFWIMLGLRIGENGPSYLCQGFIVGYVAKVLMVDKS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
VPALAVMIASLCGFLVIPLAGWLSDRFGRRVTYRWFCLLLVLYAFPAFWLLDSREPAIVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
SVIVVGMCIASLGIFGVQAAYGVELFGVKNRYSKMAFAKELGSILSGGTAPLIATALLAG
HHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGHWWPVACYFVVMAGIGLITTFFAPETRGRDLNLPQDAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETTLATPQATDETLAADERLTTKEGRGQFWRATFSCWLGTAMEYVDFALYGLAAGMVF
CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDVFFPEATPMVALLASFATYSVGFIARPIGALIFGWIGDRKGRRVVLLTTVALMGVSTT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH
LIGLIPSYAQIGVWAPTCLVILRFAQGFGAGAELSGGAVMLAEYAPAKRRGLVASIIAIG
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHCHHHHHHEEC
SNSGTLLASLVWLLVLQLDKADLIAWGWRIPFLASILIAGGALYLRRHVRETPVFERELQ
CCCCHHHHHHHHHHHHHCCCCHHEEECCHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHH
QNRQRMLDNAPVAADNRSYLQRTKAFWIMLGLRIGENGPSYLCQGFIVGYVAKVLMVDKS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
VPALAVMIASLCGFLVIPLAGWLSDRFGRRVTYRWFCLLLVLYAFPAFWLLDSREPAIVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
SVIVVGMCIASLGIFGVQAAYGVELFGVKNRYSKMAFAKELGSILSGGTAPLIATALLAG
HHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FGHWWPVACYFVVMAGIGLITTFFAPETRGRDLNLPQDAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]