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The map label for this gene is recJ [H]

Identifier: 157372124

GI number: 157372124

Start: 4310371

End: 4312104

Strand: Reverse

Name: recJ [H]

Synonym: Spro_3890

Alternate gene names: 157372124

Gene position: 4312104-4310371 (Counterclockwise)

Preceding gene: 157372125

Following gene: 157372123

Centisome position: 79.14

GC content: 62.8

Gene sequence:

>1734_bases
GTGAGCATCAAAACACAACTACGCCGCCGTGCGGCGACGGACGACAGCCATTTGCCAGCCAGCCTGCACCCGCTGTTGCG
CCGTTTATATGCGCTGCGCGGCGTTCAGGCTGAGCAGGAATTGGAACGCAGCGTCAAAGGCATGCTGCCGTGGCAGCAGT
TGGATGGCATTGACACCGCCGTTGGCATTCTGCAACAGGCGCTGGCGGCGAGTCGCCGCATCATGGTGGTGGGGGACTTC
GACGCCGATGGCGCCACCAGTACCGCGTTGACGGTGCTGGCACTGCGCAGCATGGGCGGCAGTGCGGTCGATTATCTGGT
GCCGAATCGTTTTGAGGACGGCTACGGCCTGAGTCCCGAAGTGGTCGAACAGGCGGCGACGCGCGGTGCCGAATTGATCC
TCACGGTGGATAACGGCATCTCTTCCCATGCGGGAGTGGACGTGGCCCACGCCAAAGGCATGCAGGTGCTGGTGACTGAC
CACCACCTGCCGGGGGAAACCCTGCCGGCGGCGGAAGCGATCGTCAACCCGAACCTGCGTGGCTGTGAGTTCCCTTCCAA
ATCCCTGGCCGGCGTCGGTGTGGCTTTTTATCTGATGCTGGCGCTGCGTGCGCGGCTGCGTGACAGCGGCTGGTTCGAAC
AACGTGCGCTGGCGATGCCGAACCTGGCGGAACTGCTGGATCTGGTCGCGCTCGGTACGGTGGCGGACGTGGTGCCACTC
GACGCCAACAACCGCATTCTGGTGTACCAGGGCCTGAACCGCATCCGCGCCGGTAAATGCCGGCCGGGCATCCGGGCGCT
GCTGGAAGTGGCTAATCGTGATGCACGTCAGCTGGCGGCCAACGATCTCGGCTTTGCGCTGGGGCCGCGGCTCAACGCCG
CCGGGCGGCTGGATGATATGTCGATCGGCGTGGCCTTGTTGTTGAGTGATGACATCGCGCAGGCGCGTATGTTGGCTAAC
GATCTTGATGCGCTCAATCTGACACGGCGTGAGATTGAACAGGGCATGCAGGTTGAAGCTCTGCAGCTGTGCGACGAACT
CGAGCGCAGCAGCACCGCCTTGCCATACGGGCTGGCGATGTATCATCCGGAGTGGCATCAGGGCGTGGTGGGGATTTTGG
CCTCACGGATCAAGGAGCGCTTCCATCGTCCGGTGATAGCCTTTGCACCGGCAGGTGAGGGCATTCTTAAAGGGTCGGGC
CGTTCGATAGCCGGTCTGCACATGCGTGATGCGCTGGAGCGGTTGGATACGCTGAATCCGGGGTTGATGATGAAGTTCGG
TGGTCATGCCATGGCGGCCGGGCTGTCGCTGGAAGAGAGCAAATTCGACGAGTTCCGCCAGCGCTTTGGCGATCTGGTGG
GTGAATGGCTCGATCCGGCGATGCTGGAAGGGGTGATTTGGTCTGACGGCGAACTGGCGATGCAGGAACTTTCGCTGGAA
ACGGCGGAGCTGTTGCGCGAGGGCGGCCCCTGGGGCCAGGCGTTCCCGGAACCGACCTTCGATGGCACATTCCGCATCCT
GCAGCAGCGGCTGGTGGGCGAGAAACACCTGAAACTGATGGTGGAACCGCTTGGCGGCGGCCCGCTGCTGGACGGTATCG
CTTTCAATGTCGATACCACCCTGTGGCCCGACAGCAGCGTGCGCGAAGTGGAGCTGGCCTACAAGCTCGACGTCAACGAG
TTCCGTGGCAACCGCAACGTGCAGTTACTGATCCAGCACCTCTGGCCGCGTTGA

Upstream 100 bases:

>100_bases
GGAAAACGGCATGATGATCCCAGGGTATCAGGGGCCAAAAGAGATGGCCGCCATGCTGGACGCGCATCAGACCGCAACCA
AAACCGGTGGTTAATCGCCG

Downstream 100 bases:

>100_bases
TTTGTGGCTGCTTTATCCCGGGGTTTGCTCTGCCAAACCCCGGCAAGTTTTCTTCCCCCACAAAAACTAACCAACCGGCT
ATAAACTGACGTCTGGATCC

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MSIKTQLRRRAATDDSHLPASLHPLLRRLYALRGVQAEQELERSVKGMLPWQQLDGIDTAVGILQQALAASRRIMVVGDF
DADGATSTALTVLALRSMGGSAVDYLVPNRFEDGYGLSPEVVEQAATRGAELILTVDNGISSHAGVDVAHAKGMQVLVTD
HHLPGETLPAAEAIVNPNLRGCEFPSKSLAGVGVAFYLMLALRARLRDSGWFEQRALAMPNLAELLDLVALGTVADVVPL
DANNRILVYQGLNRIRAGKCRPGIRALLEVANRDARQLAANDLGFALGPRLNAAGRLDDMSIGVALLLSDDIAQARMLAN
DLDALNLTRREIEQGMQVEALQLCDELERSSTALPYGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSG
RSIAGLHMRDALERLDTLNPGLMMKFGGHAMAAGLSLEESKFDEFRQRFGDLVGEWLDPAMLEGVIWSDGELAMQELSLE
TAELLREGGPWGQAFPEPTFDGTFRILQQRLVGEKHLKLMVEPLGGGPLLDGIAFNVDTTLWPDSSVREVELAYKLDVNE
FRGNRNVQLLIQHLWPR

Sequences:

>Translated_577_residues
MSIKTQLRRRAATDDSHLPASLHPLLRRLYALRGVQAEQELERSVKGMLPWQQLDGIDTAVGILQQALAASRRIMVVGDF
DADGATSTALTVLALRSMGGSAVDYLVPNRFEDGYGLSPEVVEQAATRGAELILTVDNGISSHAGVDVAHAKGMQVLVTD
HHLPGETLPAAEAIVNPNLRGCEFPSKSLAGVGVAFYLMLALRARLRDSGWFEQRALAMPNLAELLDLVALGTVADVVPL
DANNRILVYQGLNRIRAGKCRPGIRALLEVANRDARQLAANDLGFALGPRLNAAGRLDDMSIGVALLLSDDIAQARMLAN
DLDALNLTRREIEQGMQVEALQLCDELERSSTALPYGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSG
RSIAGLHMRDALERLDTLNPGLMMKFGGHAMAAGLSLEESKFDEFRQRFGDLVGEWLDPAMLEGVIWSDGELAMQELSLE
TAELLREGGPWGQAFPEPTFDGTFRILQQRLVGEKHLKLMVEPLGGGPLLDGIAFNVDTTLWPDSSVREVELAYKLDVNE
FRGNRNVQLLIQHLWPR
>Mature_576_residues
SIKTQLRRRAATDDSHLPASLHPLLRRLYALRGVQAEQELERSVKGMLPWQQLDGIDTAVGILQQALAASRRIMVVGDFD
ADGATSTALTVLALRSMGGSAVDYLVPNRFEDGYGLSPEVVEQAATRGAELILTVDNGISSHAGVDVAHAKGMQVLVTDH
HLPGETLPAAEAIVNPNLRGCEFPSKSLAGVGVAFYLMLALRARLRDSGWFEQRALAMPNLAELLDLVALGTVADVVPLD
ANNRILVYQGLNRIRAGKCRPGIRALLEVANRDARQLAANDLGFALGPRLNAAGRLDDMSIGVALLLSDDIAQARMLAND
LDALNLTRREIEQGMQVEALQLCDELERSSTALPYGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSGR
SIAGLHMRDALERLDTLNPGLMMKFGGHAMAAGLSLEESKFDEFRQRFGDLVGEWLDPAMLEGVIWSDGELAMQELSLET
AELLREGGPWGQAFPEPTFDGTFRILQQRLVGEKHLKLMVEPLGGGPLLDGIAFNVDTTLWPDSSVREVELAYKLDVNEF
RGNRNVQLLIQHLWPR

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=576, Percent_Identity=76.7361111111111, Blast_Score=915, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 63001; Mature: 62870

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKTQLRRRAATDDSHLPASLHPLLRRLYALRGVQAEQELERSVKGMLPWQQLDGIDTA
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCHHHH
VGILQQALAASRRIMVVGDFDADGATSTALTVLALRSMGGSAVDYLVPNRFEDGYGLSPE
HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCCCHH
VVEQAATRGAELILTVDNGISSHAGVDVAHAKGMQVLVTDHHLPGETLPAAEAIVNPNLR
HHHHHHCCCCEEEEEECCCCCCCCCCEEHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCC
GCEFPSKSLAGVGVAFYLMLALRARLRDSGWFEQRALAMPNLAELLDLVALGTVADVVPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEEC
DANNRILVYQGLNRIRAGKCRPGIRALLEVANRDARQLAANDLGFALGPRLNAAGRLDDM
CCCCEEEEECCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
SIGVALLLSDDIAQARMLANDLDALNLTRREIEQGMQVEALQLCDELERSSTALPYGLAM
HHCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEE
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSGRSIAGLHMRDALERLDTLNP
ECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCEECHHHHHHHHHHHCCCC
GLMMKFGGHAMAAGLSLEESKFDEFRQRFGDLVGEWLDPAMLEGVIWSDGELAMQELSLE
CEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEECCHHHHHHHHHHH
TAELLREGGPWGQAFPEPTFDGTFRILQQRLVGEKHLKLMVEPLGGGPLLDGIAFNVDTT
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCEEECCCCE
LWPDSSVREVELAYKLDVNEFRGNRNVQLLIQHLWPR
ECCCCCCCEEEEEEEECHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SIKTQLRRRAATDDSHLPASLHPLLRRLYALRGVQAEQELERSVKGMLPWQQLDGIDTA
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCHHHH
VGILQQALAASRRIMVVGDFDADGATSTALTVLALRSMGGSAVDYLVPNRFEDGYGLSPE
HHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEHHCCCCCCCCCCCCCHH
VVEQAATRGAELILTVDNGISSHAGVDVAHAKGMQVLVTDHHLPGETLPAAEAIVNPNLR
HHHHHHCCCCEEEEEECCCCCCCCCCEEHHCCCCEEEEECCCCCCCCCCHHHHHCCCCCC
GCEFPSKSLAGVGVAFYLMLALRARLRDSGWFEQRALAMPNLAELLDLVALGTVADVVPL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEEC
DANNRILVYQGLNRIRAGKCRPGIRALLEVANRDARQLAANDLGFALGPRLNAAGRLDDM
CCCCEEEEECCCCHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
SIGVALLLSDDIAQARMLANDLDALNLTRREIEQGMQVEALQLCDELERSSTALPYGLAM
HHCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEE
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGILKGSGRSIAGLHMRDALERLDTLNP
ECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCCEECHHHHHHHHHHHCCCC
GLMMKFGGHAMAAGLSLEESKFDEFRQRFGDLVGEWLDPAMLEGVIWSDGELAMQELSLE
CEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCEEECCHHHHHHHHHHH
TAELLREGGPWGQAFPEPTFDGTFRILQQRLVGEKHLKLMVEPLGGGPLLDGIAFNVDTT
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEEECCCCCCCCCEEECCCCE
LWPDSSVREVELAYKLDVNEFRGNRNVQLLIQHLWPR
ECCCCCCCEEEEEEEECHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]