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The map label for this gene is agaD [H]

Identifier: 157372080

GI number: 157372080

Start: 4255737

End: 4256630

Strand: Reverse

Name: agaD [H]

Synonym: Spro_3845

Alternate gene names: 157372080

Gene position: 4256630-4255737 (Counterclockwise)

Preceding gene: 157372081

Following gene: 157372079

Centisome position: 78.12

GC content: 57.72

Gene sequence:

>894_bases
ATGGCATTTAATGATTCTGACGATCTGCTGGCGCAAAAAGCGGAAAAACGTATGGCGCAGGCGCTGGCCACCAGTCAGGT
GGAGCAGGACGACTACGTCGATAGCCAGCCCGCCGAGGCTCTGACCCGCGGCGATATCAACCGGATGGCCTGGCGCTCGT
TGCTGTTGCAGGCGTCGTTCAACTATGAGCGTATGCAGGCCGGTGGCTGGCTGTATCAGTTGATCCCGGCATTGCGCAAG
ATCCACCGCAATCCGCAGGATCTGTCCAACTCGATGAAAATGCACATGGAGTTTATCAATGTGCATCCGTTTGACGTCAC
CTTCCTTTCCGGGTTGGTGCTGGCGATGGAGCAAAACAAAGAGAAGATCTCCACCATCCGTGCGGTAAAAGTGGCGCTGA
TGGGGCCGCTGGGCGGTATTGGTGATGCGCTGTTCTGGCTGACGCTGCTGCCGATCTGCGCCGGGATTGGTGCCTCGCTG
GCGCTGGAGGGCAGCCTGTTTGGGCCGATCGTCTTCCTGCTGCTGTTTAACGTCTTTCACTTCGGGCTGCGCTTCGGGCT
GGCTCACTACGGTTATCAGGCCGGAACCAGCGCGCTGGCGTTGCTGAAAACCCATACCCGACGAATATCCCACGCCGCCT
CGATTGTCGGCATGACGGTGATCGGTGCGCTGGTGGCTTCGTATGTTCATCTTTCTACCCCGCTGGTGATGCATGCCGGC
AAAGCCAGCGTGGCGCTTCAGACCGATGTGCTGGACAAGCTGATGCCCAACCTGCTGCCGCTGTGCTTTACGCTGCTGAT
TTTCTTCCTGATGAAGCGCGGCTTCTCACCGGTGAAACTGATCGGTGTGACGGTGGTGATTGGTGTGGTGGGCAAGTTTA
TCGGTTTATTGTGA

Upstream 100 bases:

>100_bases
GCGCTGGGCGCGCTGGCGATCGCCCTGATCGACTTCTTTAACAGTCAACGGGCCGCTGCCGACCCGCTCAAACAACCTGT
ACCCCAGGAGGATGCTGAAG

Downstream 100 bases:

>100_bases
GGAGCGGTTTATGCCAGGCATTGTGATTACCGGTCACGGCGGTTTCGCCAGTGGGCTGTTGCAGGCGGTTGAACAGGTGG
TGGGGCCGCAGCCGTACTGC

Product: PTS system mannose/fructose/sorbose family transporter subunit IID

Products: NA

Alternate protein names: EIID-Aga; PTS system N-acetylgalactosamine-specific EIID component [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MAFNDSDDLLAQKAEKRMAQALATSQVEQDDYVDSQPAEALTRGDINRMAWRSLLLQASFNYERMQAGGWLYQLIPALRK
IHRNPQDLSNSMKMHMEFINVHPFDVTFLSGLVLAMEQNKEKISTIRAVKVALMGPLGGIGDALFWLTLLPICAGIGASL
ALEGSLFGPIVFLLLFNVFHFGLRFGLAHYGYQAGTSALALLKTHTRRISHAASIVGMTVIGALVASYVHLSTPLVMHAG
KASVALQTDVLDKLMPNLLPLCFTLLIFFLMKRGFSPVKLIGVTVVIGVVGKFIGLL

Sequences:

>Translated_297_residues
MAFNDSDDLLAQKAEKRMAQALATSQVEQDDYVDSQPAEALTRGDINRMAWRSLLLQASFNYERMQAGGWLYQLIPALRK
IHRNPQDLSNSMKMHMEFINVHPFDVTFLSGLVLAMEQNKEKISTIRAVKVALMGPLGGIGDALFWLTLLPICAGIGASL
ALEGSLFGPIVFLLLFNVFHFGLRFGLAHYGYQAGTSALALLKTHTRRISHAASIVGMTVIGALVASYVHLSTPLVMHAG
KASVALQTDVLDKLMPNLLPLCFTLLIFFLMKRGFSPVKLIGVTVVIGVVGKFIGLL
>Mature_296_residues
AFNDSDDLLAQKAEKRMAQALATSQVEQDDYVDSQPAEALTRGDINRMAWRSLLLQASFNYERMQAGGWLYQLIPALRKI
HRNPQDLSNSMKMHMEFINVHPFDVTFLSGLVLAMEQNKEKISTIRAVKVALMGPLGGIGDALFWLTLLPICAGIGASLA
LEGSLFGPIVFLLLFNVFHFGLRFGLAHYGYQAGTSALALLKTHTRRISHAASIVGMTVIGALVASYVHLSTPLVMHAGK
ASVALQTDVLDKLMPNLLPLCFTLLIFFLMKRGFSPVKLIGVTVVIGVVGKFIGLL

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3716

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIID domain [H]

Homologues:

Organism=Escherichia coli, GI1789529, Length=260, Percent_Identity=46.9230769230769, Blast_Score=238, Evalue=4e-64,
Organism=Escherichia coli, GI1788122, Length=282, Percent_Identity=35.4609929078014, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004704
- InterPro:   IPR018405 [H]

Pfam domain/function: PF03613 EIID-AGA [H]

EC number: NA

Molecular weight: Translated: 32485; Mature: 32354

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS51108 PTS_EIID

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNDSDDLLAQKAEKRMAQALATSQVEQDDYVDSQPAEALTRGDINRMAWRSLLLQASF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC
NYERMQAGGWLYQLIPALRKIHRNPQDLSNSMKMHMEFINVHPFDVTFLSGLVLAMEQNK
CHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EKISTIRAVKVALMGPLGGIGDALFWLTLLPICAGIGASLALEGSLFGPIVFLLLFNVFH
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHHHHH
FGLRFGLAHYGYQAGTSALALLKTHTRRISHAASIVGMTVIGALVASYVHLSTPLVMHAG
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
KASVALQTDVLDKLMPNLLPLCFTLLIFFLMKRGFSPVKLIGVTVVIGVVGKFIGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFNDSDDLLAQKAEKRMAQALATSQVEQDDYVDSQPAEALTRGDINRMAWRSLLLQASF
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC
NYERMQAGGWLYQLIPALRKIHRNPQDLSNSMKMHMEFINVHPFDVTFLSGLVLAMEQNK
CHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EKISTIRAVKVALMGPLGGIGDALFWLTLLPICAGIGASLALEGSLFGPIVFLLLFNVFH
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHHHHHHH
FGLRFGLAHYGYQAGTSALALLKTHTRRISHAASIVGMTVIGALVASYVHLSTPLVMHAG
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
KASVALQTDVLDKLMPNLLPLCFTLLIFFLMKRGFSPVKLIGVTVVIGVVGKFIGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10931310; 9278503; 8932697 [H]