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The map label for this gene is agaC [H]

Identifier: 157372081

GI number: 157372081

Start: 4256620

End: 4257399

Strand: Reverse

Name: agaC [H]

Synonym: Spro_3846

Alternate gene names: 157372081

Gene position: 4257399-4256620 (Counterclockwise)

Preceding gene: 157372082

Following gene: 157372080

Centisome position: 78.13

GC content: 58.97

Gene sequence:

>780_bases
ATGTTGACTGATGCGTTATTGATTGCACTGCTGGCCGGGCTGGCGGGGGTCGATCTGTTCGACGGCCTGACCCACTTCCA
TCGTCCTGTGGTTCTGGGGCCGCTGGTCGGCCTGATCCTCGGGGATGTCTACACCGGCCTGCTGGTCGGCGGCACGCTGG
AACTGGTGTGGATGGGCATGGTGCCGCTGGCGGGGGCTCAGCCGCCGAACGTGGTGATCGGCGGGGTGATTGGCACGGCG
TTCGCCATTCTTACCAAAGCCGATCCCAAGGTGGCGATTGGCGTTGCGGTGCCGTTTTCGATTGCGGTGCAGGGCTGTAT
CACGCTGCTGTTCACCCTGTTTTCACCGATGATGCATCGCTGCGATCGCATGGTGAAAGAACTGAACTGGCGCGGTATTG
AACGGGTGAACTATCTCGGTATCACCATCCTGTTCGCGTTCTATTTCGTGGTGGCGTTTCTGCCGATTTATTTCGGCGCC
GATGCGGCCAGCGCCATGGTGCAAAAGGCCCCGGTCTGGCTGTTGGACGGCCTGGCGGTGGCGGGGGGCATGATGCCGGC
GATTGGTTTCTCACTGCTGATGAAAGTGATGATGAAAAAAACCTATGTGGCCTATTTCATCCTCGGTTTTATTTCCGTCA
CCTTCCTGAAACTGCCGATACTGGCCGTGGCGCTGGGCGCGCTGGCGATCGCCCTGATCGACTTCTTTAACAGTCAACGG
GCCGCTGCCGACCCGCTCAAACAACCTGTACCCCAGGAGGATGCTGAAGATGGCATTTAA

Upstream 100 bases:

>100_bases
GCGAACTGGCGGCGCTGGGCGTCGAGTGTGAGGTGCGTCGGGTGCCGGATGAAGCGGGTGAGCCTGTCGGCAAACTGCTG
TTTTGAGTTTGGGGGAAATC

Downstream 100 bases:

>100_bases
TGATTCTGACGATCTGCTGGCGCAAAAAGCGGAAAAACGTATGGCGCAGGCGCTGGCCACCAGTCAGGTGGAGCAGGACG
ACTACGTCGATAGCCAGCCC

Product: PTS system sorbose-specific transporter subunit IIC

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLTDALLIALLAGLAGVDLFDGLTHFHRPVVLGPLVGLILGDVYTGLLVGGTLELVWMGMVPLAGAQPPNVVIGGVIGTA
FAILTKADPKVAIGVAVPFSIAVQGCITLLFTLFSPMMHRCDRMVKELNWRGIERVNYLGITILFAFYFVVAFLPIYFGA
DAASAMVQKAPVWLLDGLAVAGGMMPAIGFSLLMKVMMKKTYVAYFILGFISVTFLKLPILAVALGALAIALIDFFNSQR
AAADPLKQPVPQEDAEDGI

Sequences:

>Translated_259_residues
MLTDALLIALLAGLAGVDLFDGLTHFHRPVVLGPLVGLILGDVYTGLLVGGTLELVWMGMVPLAGAQPPNVVIGGVIGTA
FAILTKADPKVAIGVAVPFSIAVQGCITLLFTLFSPMMHRCDRMVKELNWRGIERVNYLGITILFAFYFVVAFLPIYFGA
DAASAMVQKAPVWLLDGLAVAGGMMPAIGFSLLMKVMMKKTYVAYFILGFISVTFLKLPILAVALGALAIALIDFFNSQR
AAADPLKQPVPQEDAEDGI
>Mature_259_residues
MLTDALLIALLAGLAGVDLFDGLTHFHRPVVLGPLVGLILGDVYTGLLVGGTLELVWMGMVPLAGAQPPNVVIGGVIGTA
FAILTKADPKVAIGVAVPFSIAVQGCITLLFTLFSPMMHRCDRMVKELNWRGIERVNYLGITILFAFYFVVAFLPIYFGA
DAASAMVQKAPVWLLDGLAVAGGMMPAIGFSLLMKVMMKKTYVAYFILGFISVTFLKLPILAVALGALAIALIDFFNSQR
AAADPLKQPVPQEDAEDGI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=262, Percent_Identity=37.0229007633588, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1788121, Length=261, Percent_Identity=26.0536398467433, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 27569; Mature: 27569

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCHHHCCCCCCCCCCCC
>Mature Secondary Structure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HHHCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]