| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yadI [H]
Identifier: 157372079
GI number: 157372079
Start: 4255292
End: 4255726
Strand: Reverse
Name: yadI [H]
Synonym: Spro_3844
Alternate gene names: 157372079
Gene position: 4255726-4255292 (Counterclockwise)
Preceding gene: 157372080
Following gene: 157372077
Centisome position: 78.1
GC content: 60.69
Gene sequence:
>435_bases ATGCCAGGCATTGTGATTACCGGTCACGGCGGTTTCGCCAGTGGGCTGTTGCAGGCGGTTGAACAGGTGGTGGGGCCGCA GCCGTACTGCGTTGCGGTCAATTTTCCCGAGCAGATGAGTACTGCCGAGTTAAAAGCGGCGTTGAGCTCGGCGTTGGCCG AAGTGGCACAGCCGGACGGCGTGGTGTTTCTCACCGATATGCTCGGCGGTTCGCCGTTTCGCTGTGCCAGCGAACTGGCG GATACGCACGGGGATTGTGAGGTGCTGACCGGGGTGAATATGCAGTTGGCGGCGGAAATGATGCTGGAAAGGGACGGGCT GAGCCTGGACGAATTCCGCGAAGTGGCACTGGCGTGCGGTAAGCGCGGGTTGACCAGCCTGTGGCACGAAAGACGCCGGG TAAAATGTGAGGACGTACAGACCGACGGCATTTGA
Upstream 100 bases:
>100_bases TTCCTGATGAAGCGCGGCTTCTCACCGGTGAAACTGATCGGTGTGACGGTGGTGATTGGTGTGGTGGGCAAGTTTATCGG TTTATTGTGAGGAGCGGTTT
Downstream 100 bases:
>100_bases GGCAAGCCGGGTGACGCTGCGATGAACACCACCCGGTTGATTAACCGACGACCGGCAGCGGGCTAAGCGCCATGCGGGCC GGTTGATTCTCCTCCGGGCG
Product: PTS system fructose subfamily transporter subunit IIA
Products: protein histidine; sugar phosphate
Alternate protein names: Putative PTS system EIIA component [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPGIVITGHGGFASGLLQAVEQVVGPQPYCVAVNFPEQMSTAELKAALSSALAEVAQPDGVVFLTDMLGGSPFRCASELA DTHGDCEVLTGVNMQLAAEMMLERDGLSLDEFREVALACGKRGLTSLWHERRRVKCEDVQTDGI
Sequences:
>Translated_144_residues MPGIVITGHGGFASGLLQAVEQVVGPQPYCVAVNFPEQMSTAELKAALSSALAEVAQPDGVVFLTDMLGGSPFRCASELA DTHGDCEVLTGVNMQLAAEMMLERDGLSLDEFREVALACGKRGLTSLWHERRRVKCEDVQTDGI >Mature_143_residues PGIVITGHGGFASGLLQAVEQVVGPQPYCVAVNFPEQMSTAELKAALSSALAEVAQPDGVVFLTDMLGGSPFRCASELAD THGDCEVLTGVNMQLAAEMMLERDGLSLDEFREVALACGKRGLTSLWHERRRVKCEDVQTDGI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1786321, Length=133, Percent_Identity=39.0977443609023, Blast_Score=96, Evalue=7e-22, Organism=Escherichia coli, GI1788120, Length=126, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 [H]
Pfam domain/function: PF03610 EIIA-man [H]
EC number: 2.7.1.69
Molecular weight: Translated: 15338; Mature: 15207
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIVITGHGGFASGLLQAVEQVVGPQPYCVAVNFPEQMSTAELKAALSSALAEVAQPDG CCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC VVFLTDMLGGSPFRCASELADTHGDCEVLTGVNMQLAAEMMLERDGLSLDEFREVALACG EEEEHHHHCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHC KRGLTSLWHERRRVKCEDVQTDGI CCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PGIVITGHGGFASGLLQAVEQVVGPQPYCVAVNFPEQMSTAELKAALSSALAEVAQPDG CCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCC VVFLTDMLGGSPFRCASELADTHGDCEVLTGVNMQLAAEMMLERDGLSLDEFREVALACG EEEEHHHHCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHC KRGLTSLWHERRRVKCEDVQTDGI CCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]