| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is cdsA [H]
Identifier: 157372019
GI number: 157372019
Start: 4184180
End: 4185028
Strand: Reverse
Name: cdsA [H]
Synonym: Spro_3784
Alternate gene names: 157372019
Gene position: 4185028-4184180 (Counterclockwise)
Preceding gene: 157372020
Following gene: 157372018
Centisome position: 76.81
GC content: 56.07
Gene sequence:
>849_bases TTGCTGAAGTATCGCCTCATAACTGCTCTGATCTTAATTCCGATTGTTATCGCGGCGCTGTTTTTGCTGCCGCCGGTGGG CTTTGCCCTGGTAACACTCGTGGTGTGCATGTTAGCGGCCTGGGAGTGGGGCCAGCTGGCCGGATTTACCTCCCGCTCGC AGCGCATCTGGTTGGCGATATTGTGCGGCTTCCTGCTGGCGTTGATGATGCTCAGTATTCCGGCCTATCATCAGTCGGTC CATTTACTTCAGGTAGGCGGCTCGCTGTGGCTGTCAATGGCCTGGTGGCTGGTGGCGCTGTTGCTGGTGCTGTTTTATCC CGGCTCGGCCGCACTGTGGCGTAACTCACGTCCGATACGTCTGGTTTTCGGTCTGCTGACCATAGTGCCGTTCTTCTGGG GTATGCTATCGCTGCGTCAGTTCGGCTACGAACAAAACCACTTCACCGGCGCCTGGTGGCTGCTGTATGTGATGTTGCTG GTTTGGGGGGCGGATTCCGGTGCCTACATGTTCGGCAAACTGTTCGGCAAGCATAAGCTGGCACCCAAAGTTTCTCCGGG GAAAACCTGGGAAGGGCTGGTCGGTGGCCTGATTACTTCGGCCCTGATATCCTGGCTGTTTGGTCGTTATGCCCCGCTCA ATGTGGTGCCGACAACCTTACTGATTTGTTCGGTGATTGCCGTGCTGGCCTCCGTGCTGGGCGATCTTACCGAGAGCATG TTCAAACGCGAAGCGGGTATCAAAGACAGCGGTCATTTGATACCGGGTCATGGCGGCATACTGGATCGTATCGATAGCCT GACCGCAGCAGTGCCTGTATTTGCCTGCCTGATGCTGTTAGTGTTTTAA
Upstream 100 bases:
>100_bases TGAACTTGTCTTTGAAGGTGCGCTGAATGCATTTGCACAACGCGAGCGTCGCTTCGGGGGAACAACACCTATCGGCGCCA ATGCGTCCTAGGGGGAACTT
Downstream 100 bases:
>100_bases TCCGTCAACGGCGGGGAGTGAAGGGATTATGGTTAGCGTGCTCTGGAACTTAGTCGCATTTCTTGTTGCGCTCGGTGTAT TGATCACCGTGCATGAGTTC
Product: CDP-diglyceride synthase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLKYRLITALILIPIVIAALFLLPPVGFALVTLVVCMLAAWEWGQLAGFTSRSQRIWLAILCGFLLALMMLSIPAYHQSV HLLQVGGSLWLSMAWWLVALLLVLFYPGSAALWRNSRPIRLVFGLLTIVPFFWGMLSLRQFGYEQNHFTGAWWLLYVMLL VWGADSGAYMFGKLFGKHKLAPKVSPGKTWEGLVGGLITSALISWLFGRYAPLNVVPTTLLICSVIAVLASVLGDLTESM FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVF
Sequences:
>Translated_282_residues MLKYRLITALILIPIVIAALFLLPPVGFALVTLVVCMLAAWEWGQLAGFTSRSQRIWLAILCGFLLALMMLSIPAYHQSV HLLQVGGSLWLSMAWWLVALLLVLFYPGSAALWRNSRPIRLVFGLLTIVPFFWGMLSLRQFGYEQNHFTGAWWLLYVMLL VWGADSGAYMFGKLFGKHKLAPKVSPGKTWEGLVGGLITSALISWLFGRYAPLNVVPTTLLICSVIAVLASVLGDLTESM FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVF >Mature_282_residues MLKYRLITALILIPIVIAALFLLPPVGFALVTLVVCMLAAWEWGQLAGFTSRSQRIWLAILCGFLLALMMLSIPAYHQSV HLLQVGGSLWLSMAWWLVALLLVLFYPGSAALWRNSRPIRLVFGLLTIVPFFWGMLSLRQFGYEQNHFTGAWWLLYVMLL VWGADSGAYMFGKLFGKHKLAPKVSPGKTWEGLVGGLITSALISWLFGRYAPLNVVPTTLLICSVIAVLASVLGDLTESM FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVF
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=282, Percent_Identity=78.3687943262411, Blast_Score=438, Evalue=1e-124, Organism=Escherichia coli, GI1787677, Length=111, Percent_Identity=47.7477477477478, Blast_Score=100, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31104; Mature: 31104
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYRLITALILIPIVIAALFLLPPVGFALVTLVVCMLAAWEWGQLAGFTSRSQRIWLAI CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH LCGFLLALMMLSIPAYHQSVHLLQVGGSLWLSMAWWLVALLLVLFYPGSAALWRNSRPIR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH LVFGLLTIVPFFWGMLSLRQFGYEQNHFTGAWWLLYVMLLVWGADSGAYMFGKLFGKHKL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC APKVSPGKTWEGLVGGLITSALISWLFGRYAPLNVVPTTLLICSVIAVLASVLGDLTESM CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVF HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLKYRLITALILIPIVIAALFLLPPVGFALVTLVVCMLAAWEWGQLAGFTSRSQRIWLAI CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHH LCGFLLALMMLSIPAYHQSVHLLQVGGSLWLSMAWWLVALLLVLFYPGSAALWRNSRPIR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHH LVFGLLTIVPFFWGMLSLRQFGYEQNHFTGAWWLLYVMLLVWGADSGAYMFGKLFGKHKL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC APKVSPGKTWEGLVGGLITSALISWLFGRYAPLNVVPTTLLICSVIAVLASVLGDLTESM CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLMLLVF HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]