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The map label for this gene is ccmC [H]

Identifier: 157371626

GI number: 157371626

Start: 3749270

End: 3750007

Strand: Reverse

Name: ccmC [H]

Synonym: Spro_3389

Alternate gene names: 157371626

Gene position: 3750007-3749270 (Counterclockwise)

Preceding gene: 157371627

Following gene: 157371625

Centisome position: 68.82

GC content: 58.54

Gene sequence:

>738_bases
ATGTGGAAATGGTTACATCAGTTTGCCCAGCCTGAACGGCTGTATCGTGTCTGTGGCCGCTTTATCCCCTGGCTGGGGCT
GGCCGGAGCGGCCTGCCTGCTGTTGGGTTGGGTATGGGGCTTTGGTTTCGCACCCAAGGATTATCAGCAGGGCGACAGCT
TCCGCATCATGTATATCCATGTGCCGGCCGCCATGTGGTCGATGGGGATCTATGGCTCCATGGCAGTAGCGGCATTTATC
GGCCTGGTGTGGCAGATGAAAATGTCCGATACGGTGGTGGCGGCGATGGCGCCGGTCGGCGCGGTATTTACCTTTATTGC
CCTGGTCACCGGTTCCGCCTGGGGCAAGCCGATGTGGGGCACCTGGTGGGTGTGGGACGCACGCCTGACCTCCGAGCTGG
TGTTGCTGTTCTTGTATATCGGCATTATCGCGTTGTACAACGCCTTTGAGGATCGCCGCCTGGCGGGCCGCGCCGCCGGT
ATTTTGGTGCTGGTGGGGGTGGTGAACATCCCGATTATTCATTTCTCGGTCGAATGGTGGAACACGTTGCATCAGGGGTC
GACCAATATGCAACAGAGCATCGCGCCAAGCATGCGCACCCCGCTGCGCTGGGCGATCCTCGGCTACCTGCTGTTCTTCA
TTACTCTTACTTTGATGCGCCTGCGCAATTTGATTTTGTCTCAGGAAAGTCAGCGTCCGTGGGTCGCCGGGCTGGTCAAT
AAGGAGCGCCAACCATGA

Upstream 100 bases:

>100_bases
GGTTAACGCCATCAAGAGCGTGTTGCACCGCACCAGTAATTTTCGTCGCCTTGGTCAACAGGGCGGCCACCGTATAAATT
TACCGTGAGCAATGACGACA

Downstream 100 bases:

>100_bases
ATGCCGCATTTACTTCCTGGCAGGCGTTTTTCGCCATGGGGGGCTACGCCTTCTACGTCTGGCTGGCGGTGGCCGTTACG
CTGCTCTCGCTGCTGGGCCT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MWKWLHQFAQPERLYRVCGRFIPWLGLAGAACLLLGWVWGFGFAPKDYQQGDSFRIMYIHVPAAMWSMGIYGSMAVAAFI
GLVWQMKMSDTVVAAMAPVGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYIGIIALYNAFEDRRLAGRAAG
ILVLVGVVNIPIIHFSVEWWNTLHQGSTNMQQSIAPSMRTPLRWAILGYLLFFITLTLMRLRNLILSQESQRPWVAGLVN
KERQP

Sequences:

>Translated_245_residues
MWKWLHQFAQPERLYRVCGRFIPWLGLAGAACLLLGWVWGFGFAPKDYQQGDSFRIMYIHVPAAMWSMGIYGSMAVAAFI
GLVWQMKMSDTVVAAMAPVGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYIGIIALYNAFEDRRLAGRAAG
ILVLVGVVNIPIIHFSVEWWNTLHQGSTNMQQSIAPSMRTPLRWAILGYLLFFITLTLMRLRNLILSQESQRPWVAGLVN
KERQP
>Mature_245_residues
MWKWLHQFAQPERLYRVCGRFIPWLGLAGAACLLLGWVWGFGFAPKDYQQGDSFRIMYIHVPAAMWSMGIYGSMAVAAFI
GLVWQMKMSDTVVAAMAPVGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYIGIIALYNAFEDRRLAGRAAG
ILVLVGVVNIPIIHFSVEWWNTLHQGSTNMQQSIAPSMRTPLRWAILGYLLFFITLTLMRLRNLILSQESQRPWVAGLVN
KERQP

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=242, Percent_Identity=76.8595041322314, Blast_Score=389, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27842; Mature: 27842

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]