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The map label for this gene is ccmD [C]

Identifier: 157371625

GI number: 157371625

Start: 3749037

End: 3749273

Strand: Reverse

Name: ccmD [C]

Synonym: Spro_3388

Alternate gene names: 157371625

Gene position: 3749273-3749037 (Counterclockwise)

Preceding gene: 157371626

Following gene: 157371624

Centisome position: 68.81

GC content: 60.34

Gene sequence:

>237_bases
ATGAATGCCGCATTTACTTCCTGGCAGGCGTTTTTCGCCATGGGGGGCTACGCCTTCTACGTCTGGCTGGCGGTGGCCGT
TACGCTGCTCTCGCTGCTGGGCCTGGTGGCGCATACTTTCTGGCAGCGCCGGCAATTGCTCGATGAGATCGGCCGCCGTC
AGGCGCGCGAACGACGCATTCGTCAGTCGCAGCAGTCGAAACAAAAATCCGCCAACCCGCGGGAGAAATCATTGTGA

Upstream 100 bases:

>100_bases
TCTTCATTACTCTTACTTTGATGCGCCTGCGCAATTTGATTTTGTCTCAGGAAAGTCAGCGTCCGTGGGTCGCCGGGCTG
GTCAATAAGGAGCGCCAACC

Downstream 100 bases:

>100_bases
ATCCACGTCGTAAAAGTCGCCTGTATCTGGCGATCGTAGTGCTGATCGGCGTTGCGCTTACCGCGACCCTGATGCTGTAT
GCGCTGCGCTCCAACATCGA

Product: heme exporter protein CcmD

Products: NA

Alternate protein names: Heme Exporter Protein CcmD; Cytochrome C Biogenesis Protein Heme Exporter

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MNAAFTSWQAFFAMGGYAFYVWLAVAVTLLSLLGLVAHTFWQRRQLLDEIGRRQARERRIRQSQQSKQKSANPREKSL

Sequences:

>Translated_78_residues
MNAAFTSWQAFFAMGGYAFYVWLAVAVTLLSLLGLVAHTFWQRRQLLDEIGRRQARERRIRQSQQSKQKSANPREKSL
>Mature_78_residues
MNAAFTSWQAFFAMGGYAFYVWLAVAVTLLSLLGLVAHTFWQRRQLLDEIGRRQARERRIRQSQQSKQKSANPREKSL

Specific function: Required For The Export Of Heme To The Periplasm For The Biogenesis Of C-Type Cytochromes (Potential). [C]

COG id: COG3114

COG function: function code U; Heme exporter protein D

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788526, Length=67, Percent_Identity=50.7462686567164, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9088; Mature: 9088

Theoretical pI: Translated: 12.01; Mature: 12.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAFTSWQAFFAMGGYAFYVWLAVAVTLLSLLGLVAHTFWQRRQLLDEIGRRQARERRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQSQQSKQKSANPREKSL
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNAAFTSWQAFFAMGGYAFYVWLAVAVTLLSLLGLVAHTFWQRRQLLDEIGRRQARERRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQSQQSKQKSANPREKSL
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA