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The map label for this gene is yfbS [H]

Identifier: 157371549

GI number: 157371549

Start: 3667987

End: 3669819

Strand: Reverse

Name: yfbS [H]

Synonym: Spro_3312

Alternate gene names: 157371549

Gene position: 3669819-3667987 (Counterclockwise)

Preceding gene: 157371550

Following gene: 157371546

Centisome position: 67.35

GC content: 58.81

Gene sequence:

>1833_bases
TTGAACAGCGAATTACTGTGGGTGCTAAGTTTACTGTTGATTGCCATAGTGCTGTTCACCACCAACAAACTGCGTATGGA
CGTAGTGGCGTTGCTGGTGATCATTGCCTTTGTGCTGAGCGGCACGCTGACCCTGTCGGAGGCCACGGTGGGCTTCAGCG
ATCCCAACGTGATCCTGATCGCCGCGCTGTTCGTGATTGGTGAAGGGTTGGTGCGTACCGGCGTGGCATATCAGGTCGGT
GACTGGCTGGTGAAGGTGGCCGGCAGCAGCGAAACCAGGATGCTGATGTTGCTGATGGTCACCGTGGCCGGCCTGGGGGC
TTTTATGAGCTCGACCGGCGTGGTGGCGATCTTTATCCCGGTGGTGCTCAGCGTGGCGGCGCGGATGAAAATTCCCCCCG
GCAGGTTGATGATGCCGCTGAGTTTTGCTGGTTTAATTAGCGGCATGATGACGCTGGTGGCGACGCCGCCGAACATGGTG
GTGAACAGTGAACTGGTGCGCGAGGGCATTGGCGGCTTTGGCTTCTTTGCTGTGACGCCGGTCGGCCTGGCGGTGCTGGT
GCTGGGCGTGGGTTATATGTTGGTGGCCCGGCGCTGGCTGGGCAATGACGACGGTGATAAAACGCGTGAAACCTGGCAGC
GCCGTACCTTCCGCGATCTGATCCGCGACTATAAGTTGACCGGCCGTGCCCGTCGACTGGCGTTACGCAGCGGCTCGCCG
CTGGTAGGGCATTCACTGGACGAATTGCACCTGCGCGCCCGTTACGGTGCCAACGTGGTGGGGATTGAACGCTGGAAGCG
CTTCCGGCGGGTGATGGTTAGCGCGTCCGGCAGCACCGAGCTGCGCGAAGGGGACGTACTGCTGCTCGACATGTCGGACA
GCCAGGTCGATTTGCGCGAGTTTTGCAGCGAACAGCAGCTGGAACCGATGGTTCTGCGTGGCGATTATTTCTCCGAACAG
TCGCGCAACGTCGGCATGGCGGAAGTATCGCTGATCCCCGATTCAACGTTATTGGGGAAAAGCCTGCGCGAATCCACTTT
CCGCAGCCGTTATGATTTGAACGTGGTCGGTATTCGCCGCAATGGCGAAACCCTGGCAGGCAAGCTGGTGGATGAGCCCC
TGGCGTTGGGCGATATTCTGTTGGTGATCGGCGACTGGAAGGCGATCCGTCAACTGCAGGCGAAAACCCATGATTTTATC
GTACTCAATCTGCCGGCCGAGGTTGACGAGGTGGCGCCGGCCATTACTCAGGCACCGCACGCCTTGTTCTGCCTGGCACT
GATGGTGGCGATGATGCTGACCGATGAAATCCCTAACCCGATCGCCGCGCTGATTGCCTGCCTGTTGATGGGCAAGTTCC
GCTGCATCGACATGGAAAGCGCCTATAAGTCGATTCACTGGCCGAGCATTATCTTGATTGTCGGCATGATGCCGTTTGCC
CAGGCGTTGCAAAAGACCGGTGGGGTGGATTTGATCGTGCGCGGGTTAATGGACGTCGCCGGAGATGCCGGGCCGCGGGT
GATGCTGGTGTGCCTGTTTGCGCTGTGCGCCACTATTGGCCTGTTTATCTCCAATACCGCCACCGCCGTATTAATGGCAC
CGATCGCCATTGCCGCTGCGCGTGAAATGGGCGTTTCACCGTACCCGTTTGCCATGATTATTGCCATCGCCGCTTCGGCC
GCGTTTATGACGCCAGTTTCTTCGCCGGTGAACACGCTGGTGCTGGGGCCGGGGAATTATAAGTTCGGGGATTTCGTGCG
TATCGGCGTGCCGTTCACGCTGTTGGTGATGTTGGTCAGTGTGATTATCGTGCCCTGGCTGTATGCATTTTGA

Upstream 100 bases:

>100_bases
AACCGGCCTATCTTCACCCGAATTGATTAGACCCCGCATCGGCGGGGTTTTTTTATGCTAATTTTTAAGGCCCTAGATAT
CTCAGTTGGATGAGGCCGTT

Downstream 100 bases:

>100_bases
TTAACGGCGCAGCGTGCTGCGCCATGAAAATTACAGGGAAGAGTCCAGGCTGATTTCATCCAGCGACAGGCTGAAGCTGG
GGATAAACACCTTCATGAAA

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MNSELLWVLSLLLIAIVLFTTNKLRMDVVALLVIIAFVLSGTLTLSEATVGFSDPNVILIAALFVIGEGLVRTGVAYQVG
DWLVKVAGSSETRMLMLLMVTVAGLGAFMSSTGVVAIFIPVVLSVAARMKIPPGRLMMPLSFAGLISGMMTLVATPPNMV
VNSELVREGIGGFGFFAVTPVGLAVLVLGVGYMLVARRWLGNDDGDKTRETWQRRTFRDLIRDYKLTGRARRLALRSGSP
LVGHSLDELHLRARYGANVVGIERWKRFRRVMVSASGSTELREGDVLLLDMSDSQVDLREFCSEQQLEPMVLRGDYFSEQ
SRNVGMAEVSLIPDSTLLGKSLRESTFRSRYDLNVVGIRRNGETLAGKLVDEPLALGDILLVIGDWKAIRQLQAKTHDFI
VLNLPAEVDEVAPAITQAPHALFCLALMVAMMLTDEIPNPIAALIACLLMGKFRCIDMESAYKSIHWPSIILIVGMMPFA
QALQKTGGVDLIVRGLMDVAGDAGPRVMLVCLFALCATIGLFISNTATAVLMAPIAIAAAREMGVSPYPFAMIIAIAASA
AFMTPVSSPVNTLVLGPGNYKFGDFVRIGVPFTLLVMLVSVIIVPWLYAF

Sequences:

>Translated_610_residues
MNSELLWVLSLLLIAIVLFTTNKLRMDVVALLVIIAFVLSGTLTLSEATVGFSDPNVILIAALFVIGEGLVRTGVAYQVG
DWLVKVAGSSETRMLMLLMVTVAGLGAFMSSTGVVAIFIPVVLSVAARMKIPPGRLMMPLSFAGLISGMMTLVATPPNMV
VNSELVREGIGGFGFFAVTPVGLAVLVLGVGYMLVARRWLGNDDGDKTRETWQRRTFRDLIRDYKLTGRARRLALRSGSP
LVGHSLDELHLRARYGANVVGIERWKRFRRVMVSASGSTELREGDVLLLDMSDSQVDLREFCSEQQLEPMVLRGDYFSEQ
SRNVGMAEVSLIPDSTLLGKSLRESTFRSRYDLNVVGIRRNGETLAGKLVDEPLALGDILLVIGDWKAIRQLQAKTHDFI
VLNLPAEVDEVAPAITQAPHALFCLALMVAMMLTDEIPNPIAALIACLLMGKFRCIDMESAYKSIHWPSIILIVGMMPFA
QALQKTGGVDLIVRGLMDVAGDAGPRVMLVCLFALCATIGLFISNTATAVLMAPIAIAAAREMGVSPYPFAMIIAIAASA
AFMTPVSSPVNTLVLGPGNYKFGDFVRIGVPFTLLVMLVSVIIVPWLYAF
>Mature_610_residues
MNSELLWVLSLLLIAIVLFTTNKLRMDVVALLVIIAFVLSGTLTLSEATVGFSDPNVILIAALFVIGEGLVRTGVAYQVG
DWLVKVAGSSETRMLMLLMVTVAGLGAFMSSTGVVAIFIPVVLSVAARMKIPPGRLMMPLSFAGLISGMMTLVATPPNMV
VNSELVREGIGGFGFFAVTPVGLAVLVLGVGYMLVARRWLGNDDGDKTRETWQRRTFRDLIRDYKLTGRARRLALRSGSP
LVGHSLDELHLRARYGANVVGIERWKRFRRVMVSASGSTELREGDVLLLDMSDSQVDLREFCSEQQLEPMVLRGDYFSEQ
SRNVGMAEVSLIPDSTLLGKSLRESTFRSRYDLNVVGIRRNGETLAGKLVDEPLALGDILLVIGDWKAIRQLQAKTHDFI
VLNLPAEVDEVAPAITQAPHALFCLALMVAMMLTDEIPNPIAALIACLLMGKFRCIDMESAYKSIHWPSIILIVGMMPFA
QALQKTGGVDLIVRGLMDVAGDAGPRVMLVCLFALCATIGLFISNTATAVLMAPIAIAAAREMGVSPYPFAMIIAIAASA
AFMTPVSSPVNTLVLGPGNYKFGDFVRIGVPFTLLVMLVSVIIVPWLYAF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=610, Percent_Identity=72.7868852459016, Blast_Score=892, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 66112; Mature: 66112

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSELLWVLSLLLIAIVLFTTNKLRMDVVALLVIIAFVLSGTLTLSEATVGFSDPNVILI
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
AALFVIGEGLVRTGVAYQVGDWLVKVAGSSETRMLMLLMVTVAGLGAFMSSTGVVAIFIP
HHHHHHCCHHHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLSVAARMKIPPGRLMMPLSFAGLISGMMTLVATPPNMVVNSELVREGIGGFGFFAVTP
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHH
VGLAVLVLGVGYMLVARRWLGNDDGDKTRETWQRRTFRDLIRDYKLTGRARRLALRSGSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC
LVGHSLDELHLRARYGANVVGIERWKRFRRVMVSASGSTELREGDVLLLDMSDSQVDLRE
CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHH
FCSEQQLEPMVLRGDYFSEQSRNVGMAEVSLIPDSTLLGKSLRESTFRSRYDLNVVGIRR
HCCCCCCCCEEEECCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEC
NGETLAGKLVDEPLALGDILLVIGDWKAIRQLQAKTHDFIVLNLPAEVDEVAPAITQAPH
CCCHHHHHHHCCCHHHCCEEEEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHH
ALFCLALMVAMMLTDEIPNPIAALIACLLMGKFRCIDMESAYKSIHWPSIILIVGMMPFA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHCCCCHHHHHHHHHHHH
QALQKTGGVDLIVRGLMDVAGDAGPRVMLVCLFALCATIGLFISNTATAVLMAPIAIAAA
HHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REMGVSPYPFAMIIAIAASAAFMTPVSSPVNTLVLGPGNYKFGDFVRIGVPFTLLVMLVS
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHH
VIIVPWLYAF
HHHHHHHHCC
>Mature Secondary Structure
MNSELLWVLSLLLIAIVLFTTNKLRMDVVALLVIIAFVLSGTLTLSEATVGFSDPNVILI
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH
AALFVIGEGLVRTGVAYQVGDWLVKVAGSSETRMLMLLMVTVAGLGAFMSSTGVVAIFIP
HHHHHHCCHHHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VVLSVAARMKIPPGRLMMPLSFAGLISGMMTLVATPPNMVVNSELVREGIGGFGFFAVTP
HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHH
VGLAVLVLGVGYMLVARRWLGNDDGDKTRETWQRRTFRDLIRDYKLTGRARRLALRSGSP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC
LVGHSLDELHLRARYGANVVGIERWKRFRRVMVSASGSTELREGDVLLLDMSDSQVDLRE
CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHH
FCSEQQLEPMVLRGDYFSEQSRNVGMAEVSLIPDSTLLGKSLRESTFRSRYDLNVVGIRR
HCCCCCCCCEEEECCCCCHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEC
NGETLAGKLVDEPLALGDILLVIGDWKAIRQLQAKTHDFIVLNLPAEVDEVAPAITQAPH
CCCHHHHHHHCCCHHHCCEEEEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCHH
ALFCLALMVAMMLTDEIPNPIAALIACLLMGKFRCIDMESAYKSIHWPSIILIVGMMPFA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHCCCCHHHHHHHHHHHH
QALQKTGGVDLIVRGLMDVAGDAGPRVMLVCLFALCATIGLFISNTATAVLMAPIAIAAA
HHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REMGVSPYPFAMIIAIAASAAFMTPVSSPVNTLVLGPGNYKFGDFVRIGVPFTLLVMLVS
HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHH
VIIVPWLYAF
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]