Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yfbT [H]
Identifier: 157371550
GI number: 157371550
Start: 3669918
End: 3670574
Strand: Reverse
Name: yfbT [H]
Synonym: Spro_3313
Alternate gene names: 157371550
Gene position: 3670574-3669918 (Counterclockwise)
Preceding gene: 157371551
Following gene: 157371549
Centisome position: 67.36
GC content: 59.06
Gene sequence:
>657_bases GTGGAGTGTAAGGGTTTTCTGTTCGATCTTGATGGGACGTTGGTTGATTCACTGCCGGCGGTAGAGCGCGCCTGGATTAA CTGGGCCAAACGCCGCGGCATTAATCCGCAGGACGTACTGGATTTTATCCACGGTAAACAGGCCATTACCTCGTTGCGTC ACTTTATGCCGGGAGAAAGTGAGGCGGCCATTCAGCAGGAATTTCTGCTGCTGGAGCAGGTAGAAGCGCAGGACACCGAC GGCGTCACGGCATTACCGGGGGCCGCTGCCTTGCTCGATTGTCTGAATCGTCTCGACATCCCATGGGCGATCGTTACTTC TGGGTCGATCCCGGTTGCCAGCGCCCGTCGTAACGCCGGTGGTTTGCCGCAGCCGGAGGTGTTCATTACCGCCGAGCAGG TGAAGCATGGCAAGCCACAGCCGGACGCGTATTTGCTGGGCGCCGAGCGCCTGGGGTTGGCACCACAGGATTGTGTGGTG GTGGAAGACGCCGCCGCAGGCATTCTTTCCGGGCTGGCCGCGGGCTGCCAGGTGATTGCGGTCAATGCACCGGCCGATGC ACCCAAGCTGGAGCAGGTTGATCTACTGTTAACCTCGCTTGAACAGATTGCAGTAAGTAAAACCGAGCAGGGCGCGACGA TTAGCCTGGTGGCATAA
Upstream 100 bases:
>100_bases CAGCGGATGCTGGCCATCTGGCTGTCATGCCCACGCCAGTATCATCTGAGCGCCGTAGAGATAGCGCAAATTATCAATGC CTGATTAAAAGAGGTTTCCT
Downstream 100 bases:
>100_bases CCGGCCTATCTTCACCCGAATTGATTAGACCCCGCATCGGCGGGGTTTTTTTATGCTAATTTTTAAGGCCCTAGATATCT CAGTTGGATGAGGCCGTTTT
Product: putative phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MECKGFLFDLDGTLVDSLPAVERAWINWAKRRGINPQDVLDFIHGKQAITSLRHFMPGESEAAIQQEFLLLEQVEAQDTD GVTALPGAAALLDCLNRLDIPWAIVTSGSIPVASARRNAGGLPQPEVFITAEQVKHGKPQPDAYLLGAERLGLAPQDCVV VEDAAAGILSGLAAGCQVIAVNAPADAPKLEQVDLLLTSLEQIAVSKTEQGATISLVA
Sequences:
>Translated_218_residues MECKGFLFDLDGTLVDSLPAVERAWINWAKRRGINPQDVLDFIHGKQAITSLRHFMPGESEAAIQQEFLLLEQVEAQDTD GVTALPGAAALLDCLNRLDIPWAIVTSGSIPVASARRNAGGLPQPEVFITAEQVKHGKPQPDAYLLGAERLGLAPQDCVV VEDAAAGILSGLAAGCQVIAVNAPADAPKLEQVDLLLTSLEQIAVSKTEQGATISLVA >Mature_218_residues MECKGFLFDLDGTLVDSLPAVERAWINWAKRRGINPQDVLDFIHGKQAITSLRHFMPGESEAAIQQEFLLLEQVEAQDTD GVTALPGAAALLDCLNRLDIPWAIVTSGSIPVASARRNAGGLPQPEVFITAEQVKHGKPQPDAYLLGAERLGLAPQDCVV VEDAAAGILSGLAAGCQVIAVNAPADAPKLEQVDLLLTSLEQIAVSKTEQGATISLVA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=214, Percent_Identity=72.8971962616822, Blast_Score=304, Evalue=2e-84, Organism=Escherichia coli, GI1789046, Length=190, Percent_Identity=32.1052631578947, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1790151, Length=209, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6321834, Length=230, Percent_Identity=32.1739130434783, Blast_Score=99, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321833, Length=231, Percent_Identity=32.4675324675325, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6320905, Length=212, Percent_Identity=32.0754716981132, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6322136, Length=210, Percent_Identity=31.4285714285714, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23068; Mature: 23068
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECKGFLFDLDGTLVDSLPAVERAWINWAKRRGINPQDVLDFIHGKQAITSLRHFMPGES CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EAAIQQEFLLLEQVEAQDTDGVTALPGAAALLDCLNRLDIPWAIVTSGSIPVASARRNAG HHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCC GLPQPEVFITAEQVKHGKPQPDAYLLGAERLGLAPQDCVVVEDAAAGILSGLAAGCQVIA CCCCCCEEEEHHHHHCCCCCCCEEEECHHHHCCCCCCEEEECHHHHHHHHHHHCCCEEEE VNAPADAPKLEQVDLLLTSLEQIAVSKTEQGATISLVA EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MECKGFLFDLDGTLVDSLPAVERAWINWAKRRGINPQDVLDFIHGKQAITSLRHFMPGES CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EAAIQQEFLLLEQVEAQDTDGVTALPGAAALLDCLNRLDIPWAIVTSGSIPVASARRNAG HHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCEEEEECCCCCCHHCCCCCC GLPQPEVFITAEQVKHGKPQPDAYLLGAERLGLAPQDCVVVEDAAAGILSGLAAGCQVIA CCCCCCEEEEHHHHHCCCCCCCEEEECHHHHCCCCCCEEEECHHHHHHHHHHHCCCEEEE VNAPADAPKLEQVDLLLTSLEQIAVSKTEQGATISLVA EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]