Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371398
Identifier: 157371398
GI number: 157371398
Start: 3477884
End: 3478513
Strand: Reverse
Name: 157371398
Synonym: Spro_3159
Alternate gene names: NA
Gene position: 3478513-3477884 (Counterclockwise)
Preceding gene: 157371400
Following gene: 157371396
Centisome position: 63.84
GC content: 59.05
Gene sequence:
>630_bases ATGACCGAACGGCTTTATTATTATAGCGATGACTTACAGGGCGAAGCACAGGTGCTGGCCTGTACTCCGGTTGAAGACGG CGGATACGCGATTGAGCTGAACGCCACGCTGTTCCACCCGCAGGGCGGCGGACAACCGGCCGACGGCGGCCTGCTCGGTA CTACCCCGGTGCTGCGTGTGGCACAACAGGGCGAAAAAGTGCTGCATTTTACCGCCGAACCGCTGCCCGAAGGGCCGGTG AGCGTAACGGTTGATGGCGAACTGCGCCGCTTGCATACCCGTTGGCATTCCGCCGGACATCTGATTGGCTGGTTGGGTGA AACGCGCGGCTGGCGGCCGGTCAAGGCGCACCACTGGCCGGGTGAAGGACGTATTACCTTCGTGCCGGACGCAGAACCTC AAACCCTGGATCAGGATTTCCTGCATGCGGAGTTGGCGCGGCTGATTGCGGCGGATTTCCCACGCAAACAACTGACGGTT GACGGCCTGCGTCAGGTAGGTTTTGGTGAATTGCCTACATATGGTTGCGGCGGTACCCATGTCCCTTCCCTGGCTGAACT GGGTAGGATAAATATTACCGCGCTCAAGATGAAAAAAGGGCAGTTGATCGTGCAGTATGAGCTGGGCTGA
Upstream 100 bases:
>100_bases AGAGATTTGTGCTCACGGCGCAAAGGCCCATTGTATCTTTGATGGATTATGCTTTGATTATGGCATGAATATAATGGAGC CACTAACCAGGAGAAAAACC
Downstream 100 bases:
>100_bases GGTTTGATCCGGACCGATTATTTCGTCGGCCCGGCCTGTCGCAGCATGGTGCAGAAAGCACACTGGCATCCCGCCTGCGG CAGCGCTGCGCAGGTGCCGA
Product: threonyl/alanyl tRNA synthetase SAD
Products: NA
Alternate protein names: Alanyl-TRNA Synthetase-Related Protein; Metal-Dependent Hydrolase; Alanyl-TRNA Synthetase Domain-Containing Protein; Threonyl/Alanyl TRNA Synthetase SAD Protein; Alanyl-TRNA Synthetase
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTERLYYYSDDLQGEAQVLACTPVEDGGYAIELNATLFHPQGGGQPADGGLLGTTPVLRVAQQGEKVLHFTAEPLPEGPV SVTVDGELRRLHTRWHSAGHLIGWLGETRGWRPVKAHHWPGEGRITFVPDAEPQTLDQDFLHAELARLIAADFPRKQLTV DGLRQVGFGELPTYGCGGTHVPSLAELGRINITALKMKKGQLIVQYELG
Sequences:
>Translated_209_residues MTERLYYYSDDLQGEAQVLACTPVEDGGYAIELNATLFHPQGGGQPADGGLLGTTPVLRVAQQGEKVLHFTAEPLPEGPV SVTVDGELRRLHTRWHSAGHLIGWLGETRGWRPVKAHHWPGEGRITFVPDAEPQTLDQDFLHAELARLIAADFPRKQLTV DGLRQVGFGELPTYGCGGTHVPSLAELGRINITALKMKKGQLIVQYELG >Mature_208_residues TERLYYYSDDLQGEAQVLACTPVEDGGYAIELNATLFHPQGGGQPADGGLLGTTPVLRVAQQGEKVLHFTAEPLPEGPVS VTVDGELRRLHTRWHSAGHLIGWLGETRGWRPVKAHHWPGEGRITFVPDAEPQTLDQDFLHAELARLIAADFPRKQLTVD GLRQVGFGELPTYGCGGTHVPSLAELGRINITALKMKKGQLIVQYELG
Specific function: Unknown
COG id: COG2872
COG function: function code R; Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13376886, Length=218, Percent_Identity=30.7339449541284, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI217416402, Length=218, Percent_Identity=30.7339449541284, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22849; Mature: 22718
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERLYYYSDDLQGEAQVLACTPVEDGGYAIELNATLFHPQGGGQPADGGLLGTTPVLRV CCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEECCHHHHHH AQQGEKVLHFTAEPLPEGPVSVTVDGELRRLHTRWHSAGHLIGWLGETRGWRPVKAHHWP HHCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC GEGRITFVPDAEPQTLDQDFLHAELARLIAADFPRKQLTVDGLRQVGFGELPTYGCGGTH CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCC VPSLAELGRINITALKMKKGQLIVQYELG CCCHHHHCCEEEEEEEEECCCEEEEEECC >Mature Secondary Structure TERLYYYSDDLQGEAQVLACTPVEDGGYAIELNATLFHPQGGGQPADGGLLGTTPVLRV CCEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCEECCHHHHHH AQQGEKVLHFTAEPLPEGPVSVTVDGELRRLHTRWHSAGHLIGWLGETRGWRPVKAHHWP HHCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCC GEGRITFVPDAEPQTLDQDFLHAELARLIAADFPRKQLTVDGLRQVGFGELPTYGCGGTH CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCC VPSLAELGRINITALKMKKGQLIVQYELG CCCHHHHCCEEEEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA