Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is gsiB [H]
Identifier: 157371396
GI number: 157371396
Start: 3475817
End: 3477442
Strand: Reverse
Name: gsiB [H]
Synonym: Spro_3157
Alternate gene names: 157371396
Gene position: 3477442-3475817 (Counterclockwise)
Preceding gene: 157371398
Following gene: 157371395
Centisome position: 63.82
GC content: 58.67
Gene sequence:
>1626_bases ATGTTTAATTTCTCTTTCAATCGATTAACCAGCGGGATAACAGTGGCATTGGGACTGGCGGCGGCGATGAATCCGGCGCT GGCGTCGGTGCAGGGCGGCACGCTTGTCTACCTGGAACAGCAGGCTCACACCAACCTTTATCCGCCTTCCGGCGGTTTCT ACCCCAACGGCGGTATCCTCAATCAAATCACCGACAAACTGACCTACCAGAACCCGCAAACGCTGGAGATTGAGCCGTGG ATTGCCGAGTCCTGGAGCAGCAACGCCGATAAAACCGAATACACCTTCAAGCTGCGGCCTGGCGTGACTTTCTCCGACGG TACACCGCTGGATGCCAATGCAGTGGCGAAAAACTTCGATACCTATGGCCTGGGCAATAAAGAGAAACGTCTGCCGGTGT CCGAAGTCATCAATAACTACGACCACAGCGAAGTGATCGACCCGTTAACCGTCAAGTTTTACTTCAAGCACTCGTCTCCC GGCTTCCTGCAGGGCACCGCCACCATTGGTTCTGGCCTGGTTTCGCTCAGCACCCTGAACCGCAGCTATGACCAACTCGG TGATGCGCGCCATATCATCGGTTCCGGCCCGTTTGTGGTCAGCGCCGAGACGCTGGGGCGTGAGGTCAGCCTGAGCGTTC GCAAGGATTATCACTGGGGTCCGGCCAAATTGGCTCAGCAAGGGCGCGCTAATCTGGATGGCATCAAGGTGATTGTCACC GGCGAAGACAGCGTGCGTATCGGTGCGTTGCAGGCTGGGCAGGCGGACTTTATTCGCCAGATCCAGGCCTACGACGAGAA GCAGACGCAGGAACAGGGCTTTACGATTTACGCGGCCCCCACTCGTGGTGTCAACGACAGCGTCGCCTTCCGGCCGGATA ACCCGCTGGTGAGCGACCTGCGCGTGCGTCAGGCACTGCTGCACGCCACCGACAGCAAGCAAATTGTCGATACGCTGTTC TCGGTTAACTACCCACAGGCTAAATCGGTGATTGCTTCTTCCGCCGCCGGTTTCGTCGACTTATCCGCCAAGCTGAAATT CGACCCGGAGCTGGCCAACCGTCTGCTGGATGAGGCGGGCTGGAAAAAGGGCGGCGACGGCCTGCGTGAGAAGGACGGCA AAAAATTGCTGCTGAATGTCTATGAATCGCTGCCGCAGCCGCAGAACAAGGCGGTGCTGCAGCTGGTTTCGCAGCAGTGG GGCAAGGTCGGCGCGCGCTTGAACATTCTGGCGGGCGACGCCGGCAGCAAGGTGGCGGATAACCTCGATCCGCAGAAAAC CCCGGCGGCGGTGGTGGAGGTGGGACGGGCGGATCCGGACGTGATTAAGAGCCAGTTCTACCCGACCAACCGCGATGCGC TGTTGCAGCAGGGCGGGACGGGCAAAAACAGCGCATTCAAAGATGACAAGCTGAACGCGCTGCTGCTGGGCATCGCCTCT GAGGTGGACCCGAAAAAACGCCTGCAGATTGCCGGTGAGGCGCAGAATTACCTGCTTGATCAGGCCTATGTGATCCCGTT CTTCGAGGAGCCGCAGGTGTTTGCCGGTGCACCTTATCTGAAGGGGGTTAGTTTCGAAGCGGTCGGTCGCCCGAGTTTCT ACGGCGCCTGGTTAGAGAAACACTGA
Upstream 100 bases:
>100_bases TTTCCGCCATTGGTTAGCGAAATTAGTTCGTTCAACTCCCCGCCGATTTGGTTTGTTATCTAACCCATAACATTCCGAAA TAAAGAAGGCGTGGCACACA
Downstream 100 bases:
>100_bases GGAGGCGATGATGAGCCGATATCTGGCGCGGCGCATCGGGCAGGCGCTGCTGGTGCTGTGGGCGACCTTTAGCCTGTCGT TTCTTCTGCTGCAGGTGCTG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MFNFSFNRLTSGITVALGLAAAMNPALASVQGGTLVYLEQQAHTNLYPPSGGFYPNGGILNQITDKLTYQNPQTLEIEPW IAESWSSNADKTEYTFKLRPGVTFSDGTPLDANAVAKNFDTYGLGNKEKRLPVSEVINNYDHSEVIDPLTVKFYFKHSSP GFLQGTATIGSGLVSLSTLNRSYDQLGDARHIIGSGPFVVSAETLGREVSLSVRKDYHWGPAKLAQQGRANLDGIKVIVT GEDSVRIGALQAGQADFIRQIQAYDEKQTQEQGFTIYAAPTRGVNDSVAFRPDNPLVSDLRVRQALLHATDSKQIVDTLF SVNYPQAKSVIASSAAGFVDLSAKLKFDPELANRLLDEAGWKKGGDGLREKDGKKLLLNVYESLPQPQNKAVLQLVSQQW GKVGARLNILAGDAGSKVADNLDPQKTPAAVVEVGRADPDVIKSQFYPTNRDALLQQGGTGKNSAFKDDKLNALLLGIAS EVDPKKRLQIAGEAQNYLLDQAYVIPFFEEPQVFAGAPYLKGVSFEAVGRPSFYGAWLEKH
Sequences:
>Translated_541_residues MFNFSFNRLTSGITVALGLAAAMNPALASVQGGTLVYLEQQAHTNLYPPSGGFYPNGGILNQITDKLTYQNPQTLEIEPW IAESWSSNADKTEYTFKLRPGVTFSDGTPLDANAVAKNFDTYGLGNKEKRLPVSEVINNYDHSEVIDPLTVKFYFKHSSP GFLQGTATIGSGLVSLSTLNRSYDQLGDARHIIGSGPFVVSAETLGREVSLSVRKDYHWGPAKLAQQGRANLDGIKVIVT GEDSVRIGALQAGQADFIRQIQAYDEKQTQEQGFTIYAAPTRGVNDSVAFRPDNPLVSDLRVRQALLHATDSKQIVDTLF SVNYPQAKSVIASSAAGFVDLSAKLKFDPELANRLLDEAGWKKGGDGLREKDGKKLLLNVYESLPQPQNKAVLQLVSQQW GKVGARLNILAGDAGSKVADNLDPQKTPAAVVEVGRADPDVIKSQFYPTNRDALLQQGGTGKNSAFKDDKLNALLLGIAS EVDPKKRLQIAGEAQNYLLDQAYVIPFFEEPQVFAGAPYLKGVSFEAVGRPSFYGAWLEKH >Mature_541_residues MFNFSFNRLTSGITVALGLAAAMNPALASVQGGTLVYLEQQAHTNLYPPSGGFYPNGGILNQITDKLTYQNPQTLEIEPW IAESWSSNADKTEYTFKLRPGVTFSDGTPLDANAVAKNFDTYGLGNKEKRLPVSEVINNYDHSEVIDPLTVKFYFKHSSP GFLQGTATIGSGLVSLSTLNRSYDQLGDARHIIGSGPFVVSAETLGREVSLSVRKDYHWGPAKLAQQGRANLDGIKVIVT GEDSVRIGALQAGQADFIRQIQAYDEKQTQEQGFTIYAAPTRGVNDSVAFRPDNPLVSDLRVRQALLHATDSKQIVDTLF SVNYPQAKSVIASSAAGFVDLSAKLKFDPELANRLLDEAGWKKGGDGLREKDGKKLLLNVYESLPQPQNKAVLQLVSQQW GKVGARLNILAGDAGSKVADNLDPQKTPAAVVEVGRADPDVIKSQFYPTNRDALLQQGGTGKNSAFKDDKLNALLLGIAS EVDPKKRLQIAGEAQNYLLDQAYVIPFFEEPQVFAGAPYLKGVSFEAVGRPSFYGAWLEKH
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=531, Percent_Identity=25.9887005649718, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1789887, Length=353, Percent_Identity=23.2294617563739, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789966, Length=521, Percent_Identity=23.2245681381958, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1787762, Length=474, Percent_Identity=22.5738396624473, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 58800; Mature: 58800
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNFSFNRLTSGITVALGLAAAMNPALASVQGGTLVYLEQQAHTNLYPPSGGFYPNGGIL CCCCCHHHHHCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH NQITDKLTYQNPQTLEIEPWIAESWSSNADKTEYTFKLRPGVTFSDGTPLDANAVAKNFD HHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHCCC TYGLGNKEKRLPVSEVINNYDHSEVIDPLTVKFYFKHSSPGFLQGTATIGSGLVSLSTLN CCCCCCCCCCCCHHHHHCCCCCHHHCCCEEEEEEEEECCCCEEEEHHHHHCCHHHHHHHH RSYDQLGDARHIIGSGPFVVSAETLGREVSLSVRKDYHWGPAKLAQQGRANLDGIKVIVT HHHHHHCCCCEEECCCCEEEEHHHCCCEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEE GEDSVRIGALQAGQADFIRQIQAYDEKQTQEQGFTIYAAPTRGVNDSVAFRPDNPLVSDL CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCHHHH RVRQALLHATDSKQIVDTLFSVNYPQAKSVIASSAAGFVDLSAKLKFDPELANRLLDEAG HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHC WKKGGDGLREKDGKKLLLNVYESLPQPQNKAVLQLVSQQWGKVGARLNILAGDAGSKVAD CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHC NLDPQKTPAAVVEVGRADPDVIKSQFYPTNRDALLQQGGTGKNSAFKDDKLNALLLGIAS CCCCCCCCHHHHEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEHHC EVDPKKRLQIAGEAQNYLLDQAYVIPFFEEPQVFAGAPYLKGVSFEAVGRPSFYGAWLEK CCCHHHHEEECCCHHHHHHCCEEEEEECCCCCEEECCCCCCCCCEEECCCCCCCCHHHCC H C >Mature Secondary Structure MFNFSFNRLTSGITVALGLAAAMNPALASVQGGTLVYLEQQAHTNLYPPSGGFYPNGGIL CCCCCHHHHHCCHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH NQITDKLTYQNPQTLEIEPWIAESWSSNADKTEYTFKLRPGVTFSDGTPLDANAVAKNFD HHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCEEEEEECCCEEECCCCCCCHHHHHHCCC TYGLGNKEKRLPVSEVINNYDHSEVIDPLTVKFYFKHSSPGFLQGTATIGSGLVSLSTLN CCCCCCCCCCCCHHHHHCCCCCHHHCCCEEEEEEEEECCCCEEEEHHHHHCCHHHHHHHH RSYDQLGDARHIIGSGPFVVSAETLGREVSLSVRKDYHWGPAKLAQQGRANLDGIKVIVT HHHHHHCCCCEEECCCCEEEEHHHCCCEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEE GEDSVRIGALQAGQADFIRQIQAYDEKQTQEQGFTIYAAPTRGVNDSVAFRPDNPLVSDL CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEECCCCCCHHHH RVRQALLHATDSKQIVDTLFSVNYPQAKSVIASSAAGFVDLSAKLKFDPELANRLLDEAG HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHC WKKGGDGLREKDGKKLLLNVYESLPQPQNKAVLQLVSQQWGKVGARLNILAGDAGSKVAD CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHC NLDPQKTPAAVVEVGRADPDVIKSQFYPTNRDALLQQGGTGKNSAFKDDKLNALLLGIAS CCCCCCCCHHHHEECCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEHHC EVDPKKRLQIAGEAQNYLLDQAYVIPFFEEPQVFAGAPYLKGVSFEAVGRPSFYGAWLEK CCCHHHHEEECCCHHHHHHCCEEEEEECCCCCEEECCCCCCCCCEEECCCCCCCCHHHCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA